Details for: TDP2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 167.8611
Cell Significance Index: -26.1100 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 99.7858
Cell Significance Index: -25.3100 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 70.1060
Cell Significance Index: -28.8800 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 65.1681
Cell Significance Index: -26.4800 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 64.3477
Cell Significance Index: -30.3800 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 57.9332
Cell Significance Index: -29.8000 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 45.4083
Cell Significance Index: -30.4700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 27.9526
Cell Significance Index: -26.6900 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 22.8556
Cell Significance Index: -28.1800 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 8.7556
Cell Significance Index: -23.4600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 7.2832
Cell Significance Index: -28.7400 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 7.0878
Cell Significance Index: -21.7700 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 4.0209
Cell Significance Index: -8.8000 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 2.2190
Cell Significance Index: 33.2500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 2.0555
Cell Significance Index: 93.1700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.0000
Cell Significance Index: 69.1600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.9345
Cell Significance Index: 187.4600 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7879
Cell Significance Index: 22.7000 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.7738
Cell Significance Index: 76.5500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.6019
Cell Significance Index: 108.5100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.5733
Cell Significance Index: 113.7700 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.5228
Cell Significance Index: 13.9600 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.4998
Cell Significance Index: 61.4600 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.4517
Cell Significance Index: 73.4600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.4502
Cell Significance Index: 161.4700 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.3227
Cell Significance Index: 35.1100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2907
Cell Significance Index: 55.3200 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.2740
Cell Significance Index: 149.6300 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.2671
Cell Significance Index: 2.4600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.2531
Cell Significance Index: 34.7600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.2340
Cell Significance Index: 10.9100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.2331
Cell Significance Index: 12.1100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.2309
Cell Significance Index: 27.2300 - Cell Name: colonocyte (CL1000347)
Fold Change: 0.2120
Cell Significance Index: 1.3100 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.2019
Cell Significance Index: 89.2500 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.1705
Cell Significance Index: 21.8600 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.1527
Cell Significance Index: 4.8900 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.1519
Cell Significance Index: 5.2800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.1309
Cell Significance Index: 4.6000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1072
Cell Significance Index: 18.3000 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.1027
Cell Significance Index: 92.7400 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.0909
Cell Significance Index: 1.2400 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0893
Cell Significance Index: 5.4900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0805
Cell Significance Index: 55.6900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0789
Cell Significance Index: 5.0900 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0789
Cell Significance Index: 4.4300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0700
Cell Significance Index: 1.4900 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0643
Cell Significance Index: 3.3500 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0116
Cell Significance Index: 21.9300 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0055
Cell Significance Index: 3.5200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0061
Cell Significance Index: -9.3600 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0077
Cell Significance Index: -14.2500 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0118
Cell Significance Index: -8.7100 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0172
Cell Significance Index: -10.7100 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0183
Cell Significance Index: -24.8200 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0205
Cell Significance Index: -15.0400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0214
Cell Significance Index: -16.2000 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0231
Cell Significance Index: -0.6300 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0243
Cell Significance Index: -11.0300 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0333
Cell Significance Index: -18.7800 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0346
Cell Significance Index: -1.5300 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0356
Cell Significance Index: -5.1800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0392
Cell Significance Index: -4.0000 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0465
Cell Significance Index: -3.2900 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.0621
Cell Significance Index: -1.8300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0685
Cell Significance Index: -14.4200 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0708
Cell Significance Index: -8.1100 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0730
Cell Significance Index: -2.0400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0780
Cell Significance Index: -1.3100 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.0802
Cell Significance Index: -2.1100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0857
Cell Significance Index: -24.6500 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0879
Cell Significance Index: -3.3300 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0917
Cell Significance Index: -5.7800 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0940
Cell Significance Index: -6.3200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.1003
Cell Significance Index: -7.7000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1008
Cell Significance Index: -5.2900 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1032
Cell Significance Index: -4.8500 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1345
Cell Significance Index: -17.3700 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1476
Cell Significance Index: -17.2000 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.1505
Cell Significance Index: -3.2600 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1511
Cell Significance Index: -2.5900 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1511
Cell Significance Index: -11.2600 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.1601
Cell Significance Index: -18.2800 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.1898
Cell Significance Index: -1.9700 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.2326
Cell Significance Index: -6.8300 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2627
Cell Significance Index: -27.3500 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2772
Cell Significance Index: -6.9300 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2996
Cell Significance Index: -23.7300 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.3124
Cell Significance Index: -7.9800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.3541
Cell Significance Index: -21.7100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.3593
Cell Significance Index: -7.5200 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.3697
Cell Significance Index: -10.5500 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.3710
Cell Significance Index: -9.9400 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.3730
Cell Significance Index: -8.9500 - Cell Name: enterocyte (CL0000584)
Fold Change: -0.3901
Cell Significance Index: -2.4200 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.4523
Cell Significance Index: -8.3600 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.5077
Cell Significance Index: -13.5800 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.5159
Cell Significance Index: -14.7900 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: -0.5179
Cell Significance Index: -5.3600 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.5558
Cell Significance Index: -17.7000
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1243921434
Symbol: TYDP2_HUMAN
Name: Tyrosyl-DNA phosphodiesterase 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10764746
Title: TTRAP, a novel protein that associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor-associated factors (TRAFs), and that inhibits nuclear factor-kappa B activation.
PubMed ID: 10764746
PubMed ID: 12743594
Title: EAPII interacts with ETS1 and modulates its transcriptional function.
PubMed ID: 12743594
PubMed ID: 10931946
Title: Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning.
PubMed ID: 10931946
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 14574404
Title: The DNA sequence and analysis of human chromosome 6.
PubMed ID: 14574404
DOI: 10.1038/nature02055
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14609633
Title: Association of the nucleocapsid protein of the Seoul and Hantaan hantaviruses with small ubiquitin-like modifier-1-related molecules.
PubMed ID: 14609633
PubMed ID: 18039968
Title: Ttrap is an essential modulator of Smad3-dependent Nodal signaling during zebrafish gastrulation and left-right axis determination.
PubMed ID: 18039968
DOI: 10.1242/dev.000026
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19794497
Title: A human 5'-tyrosyl DNA phosphodiesterase that repairs topoisomerase-mediated DNA damage.
PubMed ID: 19794497
DOI: 10.1038/nature08444
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21030584
Title: TDP2/TTRAP is the major 5'-tyrosyl DNA phosphodiesterase activity in vertebrate cells and is critical for cellular resistance to topoisomerase II-induced DNA damage.
PubMed ID: 21030584
PubMed ID: 21980489
Title: TTRAP is a novel component of the non-canonical TRAF6-TAK1 TGF-beta signaling pathway.
PubMed ID: 21980489
PubMed ID: 22405347
Title: Characterization of magnesium requirement of human 5'-tyrosyl DNA phosphodiesterase mediated reaction.
PubMed ID: 22405347
PubMed ID: 21921940
Title: The PML nuclear bodies-associated protein TTRAP regulates ribosome biogenesis in nucleolar cavities upon proteasome inhibition.
PubMed ID: 21921940
DOI: 10.1038/cdd.2011.118
PubMed ID: 22822062
Title: Biochemical characterization of human Tyrosyl DNA Phosphodiesterase 2 (TDP2/TTRAP): a Mg2+/Mn2+-dependent phosphodiesterase specific for the repair of topoisomerase cleavage complexes.
PubMed ID: 22822062
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 22908287
Title: An RNA virus hijacks an incognito function of a DNA repair enzyme.
PubMed ID: 22908287
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24658003
Title: TDP2 protects transcription from abortive topoisomerase activity and is required for normal neural function.
PubMed ID: 24658003
DOI: 10.1038/ng.2929
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 27099339
Title: Mode of action of DNA-competitive small molecule inhibitors of tyrosyl DNA phosphodiesterase 2.
PubMed ID: 27099339
DOI: 10.1042/bcj20160180
PubMed ID: 27060144
Title: Reversal of DNA damage induced Topoisomerase 2 DNA-protein crosslinks by Tdp2.
PubMed ID: 27060144
DOI: 10.1093/nar/gkw228
Sequence Information:
- Length: 362
- Mass: 40930
- Checksum: 37892E125DB64410
- Sequence:
MELGSCLEGG REAAEEEGEP EVKKRRLLCV EFASVASCDA AVAQCFLAEN DWEMERALNS YFEPPVEESA LERRPETISE PKTYVDLTNE ETTDSTTSKI SPSEDTQQEN GSMFSLITWN IDGLDLNNLS ERARGVCSYL ALYSPDVIFL QEVIPPYYSY LKKRSSNYEI ITGHEEGYFT AIMLKKSRVK LKSQEIIPFP STKMMRNLLC VHVNVSGNEL CLMTSHLEST RGHAAERMNQ LKMVLKKMQE APESATVIFA GDTNLRDREV TRCGGLPNNI VDVWEFLGKP KHCQYTWDTQ MNSNLGITAA CKLRFDRIFF RAAAEEGHII PRSLDLLGLE KLDCGRFPSD HWGLLCNLDI IL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.