Details for: PGM3

Gene ID: 5238

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: PGM3

Ensembl ID: ENSG00000013375

Description: phosphoglucomutase 3

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • astrocyte of the cerebral cortex CL0002605
    CSI 7.76
    rCSI 17.39%
    PRS 62.96
  • hepatic stellate cell CL0000632
    CSI 6.35
    rCSI 23.79%
    PRS 72.48
  • epithelial cell of lower respiratory tract CL0002632
    CSI 4.82
    rCSI 3.74%
    PRS 83.7
  • interneuron CL0000099
    CSI 4.45
    rCSI 8.94%
    PRS 70.28
  • epithelial cell of lung CL0000082
    CSI 4.26
    rCSI 3.53%
    PRS 80.74
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 4.2
    rCSI 10.86%
    PRS 75.47
  • chondrocyte CL0000138
    CSI 4.06
    rCSI 6.45%
    PRS 73.06
  • choroid plexus epithelial cell CL0000706
    CSI 3.27
    rCSI 5.35%
    PRS 69.63
  • colon goblet cell CL0009039
    CSI 3.24
    rCSI 7.71%
    PRS 85.27
  • stem cell CL0000034
    CSI 3.11
    rCSI 3%
    PRS 73.34
  • midzonal region hepatocyte CL0019028
    CSI 3.02
    rCSI 7.09%
    PRS 80.15
  • intestine goblet cell CL0019031
    CSI 2.96
    rCSI 2.63%
    PRS 77.77
  • pancreatic D cell CL0000173
    CSI 2.88
    rCSI 2.83%
    PRS 82.7
  • pancreatic acinar cell CL0002064
    CSI 2.88
    rCSI 3.82%
    PRS 85.52
  • mucus secreting cell CL0000319
    CSI 2.81
    rCSI 4.47%
    PRS 88.52
  • pancreatic A cell CL0000171
    CSI 2.76
    rCSI 2.89%
    PRS 83.32
  • plasmablast CL0000980
    CSI 2.73
    rCSI 2.15%
    PRS 84.89
  • tracheobronchial serous cell CL0019001
    CSI 2.72
    rCSI 11.77%
    PRS 87.02
  • melanocyte CL0000148
    CSI 2.68
    rCSI 1.99%
    PRS 73.61
  • neural crest cell CL0011012
    CSI 2.64
    rCSI 2.09%
    PRS 68.84
  • centrilobular region hepatocyte CL0019029
    CSI 2.63
    rCSI 6.86%
    PRS 78.76
  • sst GABAergic cortical interneuron CL4023017
    CSI 2.61
    rCSI 3.37%
    PRS 63.25
  • mucous neck cell CL0000651
    CSI 2.51
    rCSI 3.61%
    PRS 86.81
  • fibroblast of lung CL0002553
    CSI 2.5
    rCSI 2.33%
    PRS 80.9
  • brush cell of tracheobronchial tree CL0002075
    CSI 2.47
    rCSI 7.34%
    PRS 88.39
  • extravillous trophoblast CL0008036
    CSI 2.46
    rCSI 3.05%
    PRS 77.94
  • goblet cell CL0000160
    CSI 2.46
    rCSI 2.32%
    PRS 78.71
  • retinal rod cell CL0000604
    CSI 2.45
    rCSI 4.31%
    PRS 75.58
  • IgA plasma cell CL0000987
    CSI 2.44
    rCSI 2.49%
    PRS 87.3
  • perivascular cell CL4033054
    CSI 2.41
    rCSI 3.3%
    PRS 84.44
  • lung ciliated cell CL1000271
    CSI 2.38
    rCSI 2.75%
    PRS 72.43
  • lung neuroendocrine cell CL1000223
    CSI 2.1
    rCSI 3.1%
    PRS 83.93
  • central nervous system neuron CL2000029
    CSI 2.03
    rCSI 14.93%
    PRS 67.52
  • Mueller cell CL0000636
    CSI 2.02
    rCSI 4.61%
    PRS 71.57
  • lung secretory cell CL1000272
    CSI 2.01
    rCSI 4.96%
    PRS 79.83
  • IgG plasma cell CL0000985
    CSI 1.99
    rCSI 2.38%
    PRS 89.57
  • duct epithelial cell CL0000068
    CSI 1.98
    rCSI 2.9%
    PRS 84.8
  • fibroblast of cardiac tissue CL0002548
    CSI 1.98
    rCSI 9.46%
    PRS 79.95
  • ionocyte CL0005006
    CSI 1.96
    rCSI 2.1%
    PRS 81.36
  • retina horizontal cell CL0000745
    CSI 1.95
    rCSI 2.98%
    PRS 76.9
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 1.92
    rCSI 3.48%
    PRS 71.57
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.91
    rCSI 2.37%
    PRS 60.06
  • myeloid leukocyte CL0000766
    CSI 1.9
    rCSI 1.75%
    PRS 81.53
  • ciliated epithelial cell CL0000067
    CSI 1.89
    rCSI 1.66%
    PRS 69.35
  • adipocyte CL0000136
    CSI 1.88
    rCSI 2.42%
    PRS 70.28
  • colon epithelial cell CL0011108
    CSI 1.83
    rCSI 1.92%
    PRS 77.52
  • mesodermal cell CL0000222
    CSI 1.79
    rCSI 2.15%
    PRS 77.82
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 1.72
    rCSI 1.98%
    PRS 72.16
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.71
    rCSI 4.35%
    PRS 70.55
  • enteroendocrine cell CL0000164
    CSI 1.68
    rCSI 2.29%
    PRS 79.86
  • intestinal epithelial cell CL0002563
    CSI 1.68
    rCSI 1.75%
    PRS 77.73
  • cerebral cortex endothelial cell CL1001602
    CSI 1.66
    rCSI 2.88%
    PRS 71.69
  • alveolar type 1 fibroblast cell CL4028004
    CSI 1.66
    rCSI 1.82%
    PRS 81.89
  • rod bipolar cell CL0000751
    CSI 1.62
    rCSI 2.9%
    PRS 73.46
  • radial glial cell CL0000681
    CSI 1.61
    rCSI 2.24%
    PRS 78.53
  • small intestine goblet cell CL1000495
    CSI 1.61
    rCSI 3.53%
    PRS 85.52
  • conjunctival epithelial cell CL1000432
    CSI 1.61
    rCSI 2.46%
    PRS 80.28
  • enterocyte CL0000584
    CSI 1.59
    rCSI 2.57%
    PRS 79.29
  • fallopian tube secretory epithelial cell CL4030006
    CSI 1.58
    rCSI 1.52%
    PRS 79.41
  • basal cell of prostate epithelium CL0002341
    CSI 1.57
    rCSI 4.54%
    PRS 86.63
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 1.55
    rCSI 2%
    PRS 76.11
  • periportal region hepatocyte CL0019026
    CSI 1.55
    rCSI 6.04%
    PRS 79.67
  • transit amplifying cell of colon CL0009011
    CSI 1.52
    rCSI 1.78%
    PRS 81.64
  • placental villous trophoblast CL2000060
    CSI 1.51
    rCSI 2.34%
    PRS 79.15
  • glioblast CL0000030
    CSI 1.5
    rCSI 2.4%
    PRS 71.66
  • tendon cell CL0000388
    CSI 1.5
    rCSI 3.9%
    PRS 87.08
  • vascular associated smooth muscle cell CL0000359
    CSI 1.48
    rCSI 4.79%
    PRS 78.23
  • hepatocyte CL0000182
    CSI 1.48
    rCSI 2.64%
    PRS 79.21
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.45
    rCSI 1.73%
    PRS 62.24
  • alveolar adventitial fibroblast CL4028006
    CSI 1.44
    rCSI 2.28%
    PRS 81.55
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 1.4
    rCSI 5.02%
    PRS 60.03
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.39
    rCSI 2.46%
    PRS 61.48
  • colonocyte CL1000347
    CSI 1.38
    rCSI 1.98%
    PRS 80.75
  • luminal epithelial cell of mammary gland CL0002326
    CSI 1.37
    rCSI 2.49%
    PRS 89.88
  • acinar cell CL0000622
    CSI 1.31
    rCSI 1.92%
    PRS 89
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 1.29
    rCSI 2.17%
    PRS 62.12
  • cardiac muscle cell CL0000746
    CSI 1.28
    rCSI 1.83%
    PRS 69.84
  • paneth cell CL0000510
    CSI 1.24
    rCSI 1.83%
    PRS 89.81
  • retinal cone cell CL0000573
    CSI 1.2
    rCSI 1.93%
    PRS 70.12
  • L6b glutamatergic cortical neuron CL4023038
    CSI 1.19
    rCSI 3.72%
    PRS 63.79
  • epicardial adipocyte CL1000309
    CSI 1.15
    rCSI 3.74%
    PRS 77.73
  • sncg GABAergic cortical interneuron CL4023015
    CSI 1.08
    rCSI 1.74%
    PRS 63.71
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.08
    rCSI 3.02%
    PRS 86.96
  • blood vessel smooth muscle cell CL0019018
    CSI 1.01
    rCSI 8.23%
    PRS 74.2
  • retinal ganglion cell CL0000740
    CSI 0.99
    rCSI 2.19%
    PRS 65.86
  • mesenchymal cell CL0008019
    CSI 0.98
    rCSI 2.48%
    PRS 73.39
  • syncytiotrophoblast cell CL0000525
    CSI 0.92
    rCSI 2.66%
    PRS 86.19
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.91
    rCSI 3.44%
    PRS 62.6
  • forebrain radial glial cell CL0013000
    CSI 0.88
    rCSI 2.82%
    PRS 82.06
  • pancreatic ductal cell CL0002079
    CSI 0.85
    rCSI 1.66%
    PRS 82.99
  • amacrine cell CL0000561
    CSI 0.82
    rCSI 2.38%
    PRS 69.62
  • type B pancreatic cell CL0000169
    CSI 0.79
    rCSI 1.75%
    PRS 79.48
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.77
    rCSI 1.88%
    PRS 60.11
  • luminal cell of prostate epithelium CL0002340
    CSI 0.64
    rCSI 3.44%
    PRS 87.73
  • glial cell CL0000125
    CSI 0.61
    rCSI 2.32%
    PRS 71.07
  • acinar cell of salivary gland CL0002623
    CSI 0.59
    rCSI 13.82%
    PRS 91.52
  • pancreatic stellate cell CL0002410
    CSI 0.56
    rCSI 3.23%
    PRS 83.96
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.52
    rCSI 1.61%
    PRS 66.13
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 0.5
    rCSI 2.94%
    PRS 62.83
  • indirect pathway medium spiny neuron CL4023029
    CSI 0.22
    rCSI 5.21%
    PRS 61.02
  • direct pathway medium spiny neuron CL4023026
    CSI 0.2
    rCSI 4.9%
    PRS 60.5%
  • indirect pathway medium spiny neuron CL4023029
    CSI 0.2
    rCSI 5.2%
    PRS 61.0%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 0.5
    rCSI 2.9%
    PRS 62.8%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.5
    rCSI 1.6%
    PRS 66.1%
  • pancreatic stellate cell CL0002410
    CSI 0.6
    rCSI 3.2%
    PRS 84.0%
  • acinar cell of salivary gland CL0002623
    CSI 0.6
    rCSI 13.8%
    PRS 91.5%
  • glial cell CL0000125
    CSI 0.6
    rCSI 2.3%
    PRS 71.1%
  • luminal cell of prostate epithelium CL0002340
    CSI 0.6
    rCSI 3.4%
    PRS 87.7%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.8
    rCSI 1.9%
    PRS 60.1%
  • type B pancreatic cell CL0000169
    CSI 0.8
    rCSI 1.8%
    PRS 79.5%
  • amacrine cell CL0000561
    CSI 0.8
    rCSI 2.4%
    PRS 69.6%
  • pancreatic ductal cell CL0002079
    CSI 0.9
    rCSI 1.7%
    PRS 83.0%
  • forebrain radial glial cell CL0013000
    CSI 0.9
    rCSI 2.8%
    PRS 82.1%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.9
    rCSI 3.4%
    PRS 62.6%
  • syncytiotrophoblast cell CL0000525
    CSI 0.9
    rCSI 2.7%
    PRS 86.2%
  • mesenchymal cell CL0008019
    CSI 1.0
    rCSI 2.5%
    PRS 73.4%
  • retinal ganglion cell CL0000740
    CSI 1.0
    rCSI 2.2%
    PRS 65.9%
  • blood vessel smooth muscle cell CL0019018
    CSI 1.0
    rCSI 8.2%
    PRS 74.2%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.1
    rCSI 3.0%
    PRS 87.0%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 1.1
    rCSI 1.7%
    PRS 63.7%
  • epicardial adipocyte CL1000309
    CSI 1.2
    rCSI 3.7%
    PRS 77.7%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 1.2
    rCSI 3.7%
    PRS 63.8%
  • retinal cone cell CL0000573
    CSI 1.2
    rCSI 1.9%
    PRS 70.1%
  • paneth cell CL0000510
    CSI 1.2
    rCSI 1.8%
    PRS 89.8%
  • cardiac muscle cell CL0000746
    CSI 1.3
    rCSI 1.8%
    PRS 69.8%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 1.3
    rCSI 2.2%
    PRS 62.1%
  • acinar cell CL0000622
    CSI 1.3
    rCSI 1.9%
    PRS 89.0%
  • luminal epithelial cell of mammary gland CL0002326
    CSI 1.4
    rCSI 2.5%
    PRS 89.9%
  • colonocyte CL1000347
    CSI 1.4
    rCSI 2.0%
    PRS 80.8%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.4
    rCSI 2.5%
    PRS 61.5%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 1.4
    rCSI 5.0%
    PRS 60.0%
  • alveolar adventitial fibroblast CL4028006
    CSI 1.4
    rCSI 2.3%
    PRS 81.6%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.5
    rCSI 1.7%
    PRS 62.2%
  • hepatocyte CL0000182
    CSI 1.5
    rCSI 2.6%
    PRS 79.2%
  • vascular associated smooth muscle cell CL0000359
    CSI 1.5
    rCSI 4.8%
    PRS 78.2%
  • tendon cell CL0000388
    CSI 1.5
    rCSI 3.9%
    PRS 87.1%
  • glioblast CL0000030
    CSI 1.5
    rCSI 2.4%
    PRS 71.7%
  • placental villous trophoblast CL2000060
    CSI 1.5
    rCSI 2.3%
    PRS 79.2%
  • transit amplifying cell of colon CL0009011
    CSI 1.5
    rCSI 1.8%
    PRS 81.6%
  • periportal region hepatocyte CL0019026
    CSI 1.6
    rCSI 6.0%
    PRS 79.7%
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 1.6
    rCSI 2.0%
    PRS 76.1%
  • basal cell of prostate epithelium CL0002341
    CSI 1.6
    rCSI 4.5%
    PRS 86.6%
  • fallopian tube secretory epithelial cell CL4030006
    CSI 1.6
    rCSI 1.5%
    PRS 79.4%
  • enterocyte CL0000584
    CSI 1.6
    rCSI 2.6%
    PRS 79.3%
  • conjunctival epithelial cell CL1000432
    CSI 1.6
    rCSI 2.5%
    PRS 80.3%
  • small intestine goblet cell CL1000495
    CSI 1.6
    rCSI 3.5%
    PRS 85.5%
  • radial glial cell CL0000681
    CSI 1.6
    rCSI 2.2%
    PRS 78.5%
  • rod bipolar cell CL0000751
    CSI 1.6
    rCSI 2.9%
    PRS 73.5%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 1.7
    rCSI 1.8%
    PRS 81.9%
  • cerebral cortex endothelial cell CL1001602
    CSI 1.7
    rCSI 2.9%
    PRS 71.7%
  • intestinal epithelial cell CL0002563
    CSI 1.7
    rCSI 1.8%
    PRS 77.7%
  • enteroendocrine cell CL0000164
    CSI 1.7
    rCSI 2.3%
    PRS 79.9%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.7
    rCSI 4.4%
    PRS 70.6%
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 1.7
    rCSI 2.0%
    PRS 72.2%
  • mesodermal cell CL0000222
    CSI 1.8
    rCSI 2.2%
    PRS 77.8%
  • colon epithelial cell CL0011108
    CSI 1.8
    rCSI 1.9%
    PRS 77.5%
  • adipocyte CL0000136
    CSI 1.9
    rCSI 2.4%
    PRS 70.3%
  • ciliated epithelial cell CL0000067
    CSI 1.9
    rCSI 1.7%
    PRS 69.4%
  • myeloid leukocyte CL0000766
    CSI 1.9
    rCSI 1.8%
    PRS 81.5%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.9
    rCSI 2.4%
    PRS 60.1%
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 1.9
    rCSI 3.5%
    PRS 71.6%
  • retina horizontal cell CL0000745
    CSI 2.0
    rCSI 3.0%
    PRS 76.9%
  • ionocyte CL0005006
    CSI 2.0
    rCSI 2.1%
    PRS 81.4%
  • fibroblast of cardiac tissue CL0002548
    CSI 2.0
    rCSI 9.5%
    PRS 80.0%
  • duct epithelial cell CL0000068
    CSI 2.0
    rCSI 2.9%
    PRS 84.8%
  • IgG plasma cell CL0000985
    CSI 2.0
    rCSI 2.4%
    PRS 89.6%
  • lung secretory cell CL1000272
    CSI 2.0
    rCSI 5.0%
    PRS 79.8%
  • Mueller cell CL0000636
    CSI 2.0
    rCSI 4.6%
    PRS 71.6%
  • central nervous system neuron CL2000029
    CSI 2.0
    rCSI 14.9%
    PRS 67.5%
  • lung neuroendocrine cell CL1000223
    CSI 2.1
    rCSI 3.1%
    PRS 83.9%
  • lung ciliated cell CL1000271
    CSI 2.4
    rCSI 2.8%
    PRS 72.4%
  • perivascular cell CL4033054
    CSI 2.4
    rCSI 3.3%
    PRS 84.4%
  • IgA plasma cell CL0000987
    CSI 2.4
    rCSI 2.5%
    PRS 87.3%
  • retinal rod cell CL0000604
    CSI 2.5
    rCSI 4.3%
    PRS 75.6%
  • goblet cell CL0000160
    CSI 2.5
    rCSI 2.3%
    PRS 78.7%
  • extravillous trophoblast CL0008036
    CSI 2.5
    rCSI 3.1%
    PRS 77.9%
  • brush cell of tracheobronchial tree CL0002075
    CSI 2.5
    rCSI 7.3%
    PRS 88.4%
  • fibroblast of lung CL0002553
    CSI 2.5
    rCSI 2.3%
    PRS 80.9%
  • mucous neck cell CL0000651
    CSI 2.5
    rCSI 3.6%
    PRS 86.8%
  • sst GABAergic cortical interneuron CL4023017
    CSI 2.6
    rCSI 3.4%
    PRS 63.3%
  • centrilobular region hepatocyte CL0019029
    CSI 2.6
    rCSI 6.9%
    PRS 78.8%
  • neural crest cell CL0011012
    CSI 2.6
    rCSI 2.1%
    PRS 68.8%
  • melanocyte CL0000148
    CSI 2.7
    rCSI 2.0%
    PRS 73.6%
  • tracheobronchial serous cell CL0019001
    CSI 2.7
    rCSI 11.8%
    PRS 87.0%
  • plasmablast CL0000980
    CSI 2.7
    rCSI 2.2%
    PRS 84.9%
  • pancreatic A cell CL0000171
    CSI 2.8
    rCSI 2.9%
    PRS 83.3%
  • mucus secreting cell CL0000319
    CSI 2.8
    rCSI 4.5%
    PRS 88.5%
  • pancreatic acinar cell CL0002064
    CSI 2.9
    rCSI 3.8%
    PRS 85.5%
  • pancreatic D cell CL0000173
    CSI 2.9
    rCSI 2.8%
    PRS 82.7%
  • intestine goblet cell CL0019031
    CSI 3.0
    rCSI 2.6%
    PRS 77.8%
  • midzonal region hepatocyte CL0019028
    CSI 3.0
    rCSI 7.1%
    PRS 80.2%
  • stem cell CL0000034
    CSI 3.1
    rCSI 3.0%
    PRS 73.3%
  • colon goblet cell CL0009039
    CSI 3.2
    rCSI 7.7%
    PRS 85.3%
  • choroid plexus epithelial cell CL0000706
    CSI 3.3
    rCSI 5.4%
    PRS 69.6%
  • chondrocyte CL0000138
    CSI 4.1
    rCSI 6.5%
    PRS 73.1%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 4.2
    rCSI 10.9%
    PRS 75.5%
  • epithelial cell of lung CL0000082
    CSI 4.3
    rCSI 3.5%
    PRS 80.7%
  • interneuron CL0000099
    CSI 4.5
    rCSI 8.9%
    PRS 70.3%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 4.8
    rCSI 3.7%
    PRS 83.7%
  • hepatic stellate cell CL0000632
    CSI 6.4
    rCSI 23.8%
    PRS 72.5%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary Phosphoglucomutase 3 ([PGM3](/details-gene/5238)) is a crucial enzyme that catalyzes the interconversion of N-acetylglucosamine-6-phosphate and N-acetylglucosamine-1-phosphate, a key step in the biosynthesis of UDP-N-acetylglucosamine. This places it at the center of carbohydrate metabolism, particularly in pathways for protein N-linked and O-linked glycosylation ([Link](https://doi.org/10.1016/s0378-1119(99)00543-0)). **Overall**, its expression profile indicates a widespread and vital role in metabolically active and secretory cells, with the highest significance observed in [astrocyte of the cerebral cortex](/details-cell/CL0002605), [hepatic stellate cell](/details-cell/CL0000632), and various epithelial cell types. Mutations in [PGM3](/details-gene/5238) are associated with a congenital disorder of glycosylation characterized by severe immunodeficiency and skeletal dysplasia ([Link](https://doi.org/10.1016/j.ajhg.2014.05.007); OMIM: [172100](https://omim.org/entry/172100)), highlighting its fundamental importance in cellular function. ## Cellular Roles and Expression Landscape The expression pattern of [PGM3](/details-gene/5238) underscores its role as a fundamental metabolic "workhorse" enzyme essential for a diverse array of cell types, particularly those with high secretory or synthetic loads. **Overall**, the gene shows high significance in several functionally distinct cell populations. In the central nervous system, it is a top marker for [astrocyte of the cerebral cortex](/details-cell/CL0002605) (CSI: 7.76) and also shows high significance in the [interneuron](/details-cell/CL0000099) (CSI: 4.45), suggesting a critical role in maintaining glial and neuronal homeostasis, possibly through glycosylation of cell-surface and extracellular matrix proteins. Its prominence in [hepatic stellate cell](/details-cell/CL0000632) (CSI: 6.35) and [midzonal region hepatocyte](/details-cell/CL0019028) (CSI: 3.02) is consistent with the liver's extensive role in synthesizing and secreting glycosylated plasma proteins. Furthermore, [PGM3](/details-gene/5238) is highly significant in multiple epithelial and secretory cell types. This includes [epithelial cell of lower respiratory tract](/details-cell/CL0002632) (CSI: 4.82), [epithelial cell of lung](/details-cell/CL0000082) (CSI: 4.26), [colon goblet cell](/details-cell/CL0009039) (CSI: 3.24), and [mucus secreting cell](/details-cell/CL0000319) (CSI: 2.81), which aligns with its function in producing the heavily glycosylated mucin proteins that form protective barriers. Its high significance in [chondrocyte](/details-cell/CL0000138) (CSI: 4.06) is also notable, reflecting the essential role of glycosylation in synthesizing proteoglycans for the cartilage extracellular matrix. ## Pathways and Molecular Function The molecular function of [PGM3](/details-gene/5238) as a phosphoacetylglucosamine mutase ([GO:0004610](https://www.ebi.ac.uk/QuickGO/term/GO:0004610)) is central to its biological impact ([Link](https://doi.org/10.1016/s0167-4781(00)00120-2)). This activity is a rate-limiting step in the UDP-N-acetylglucosamine biosynthetic process ([GO:0006048](https://www.ebi.ac.uk/QuickGO/term/GO:0006048)), a critical precursor for complex carbohydrate synthesis. Consequently, [PGM3](/details-gene/5238) is deeply involved in post-translational protein modification, particularly N-linked and O-linked glycosylation ([GO:0006487](https://www.ebi.ac.uk/QuickGO/term/GO:0006487), [GO:0006493](https://www.ebi.ac.uk/QuickGO/term/GO:0006493)). This is further detailed in Reactome pathways such as `Asparagine n-linked glycosylation` ([R-HSA-446203](https://reactome.org/content/detail/R-HSA-446203)) and `Synthesis of substrates in n-glycan biosythesis` ([R-HSA-446219](https://reactome.org/content/detail/R-HSA-446219)). These glycosylation processes are vital for protein folding, stability, and function, explaining the gene's broad importance across diverse cell types. Its noted involvement in processes like `Hemopoiesis` ([GO:0030097](https://www.ebi.ac.uk/QuickGO/term/GO:0030097)) and `Spermatogenesis` ([GO:0007283](https://www.ebi.ac.uk/QuickGO/term/GO:0007283)) is consistent with the known requirement of proper glycosylation for immune cell function and sperm development, respectively. ## Research Directions The established role of [PGM3](/details-gene/5238) in a severe congenital disorder of glycosylation provides a clear basis for further investigation, connecting its fundamental molecular function to systemic pathology. ### Proposed Hypotheses: 1. **Cell-type specific contributions to pathology:** The skeletal dysplasia seen in patients with [PGM3](/details-gene/5238) mutations is a direct consequence of impaired proteoglycan synthesis in [chondrocyte](/details-cell/CL0000138)s, leading to disorganized cartilage matrix and defective endochondral ossification. 2. **Neurological implications of PGM3 deficiency:** Given its high significance in [astrocyte of the cerebral cortex](/details-cell/CL0002605), [PGM3](/details-gene/5238) deficiency may cause subtle but significant neurological defects by disrupting the glycosylation of key proteins involved in synaptic function, myelination, or the structural integrity of the neurovascular unit. ### Key Experimental Approach: To test the first hypothesis, a conditional knockout mouse model could be generated by crossing mice carrying a floxed [PGM3](/details-gene/5238) allele with mice expressing Cre recombinase under the control of a chondrocyte-specific promoter (e.g., Col2a1-Cre). The resulting offspring would lack [PGM3](/details-gene/5238) specifically in cartilage tissue. Skeletal development in these mice could be analyzed using whole-mount skeletal staining (Alcian Blue/Alizarin Red), micro-CT, and histological analysis of the growth plates. Further biochemical assays could quantify the reduction in glycosaminoglycan content within the cartilage matrix, directly linking the molecular defect to the tissue-level phenotype. ### Therapeutic Potential: As a housekeeping enzyme whose loss-of-function causes severe disease, [PGM3](/details-gene/5238) is not a candidate for therapeutic inhibition. Instead, therapeutic strategies would focus on **restoring its function**. For a congenital disorder, gene therapy represents a promising avenue. For example, ex vivo correction of hematopoietic stem cells with a functional [PGM3](/details-gene/5238) transgene followed by autologous transplantation could potentially ameliorate the severe immunodeficiency associated with the disease. Systemic enzyme replacement therapy is likely unfeasible due to the cytosolic localization of the PGM3 protein.

Genular Protein ID: 2262051024

Symbol: AGM1_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10721701

Title: Cloning and characterization of complementary DNA encoding human N-acetylglucosamine-phosphate mutase protein.

PubMed ID: 10721701

DOI: 10.1016/s0378-1119(99)00543-0

PubMed ID: 11004509

Title: Functional cloning and mutational analysis of the human cDNA for phosphoacetylglucosamine mutase: identification of the amino acid residues essential for the catalysis.

PubMed ID: 11004509

DOI: 10.1016/s0167-4781(00)00120-2

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24931394

Title: PGM3 mutations cause a congenital disorder of glycosylation with severe immunodeficiency and skeletal dysplasia.

PubMed ID: 24931394

DOI: 10.1016/j.ajhg.2014.05.007

PubMed ID: 24589341

Title: Autosomal recessive phosphoglucomutase 3 (PGM3) mutations link glycosylation defects to atopy, immune deficiency, autoimmunity, and neurocognitive impairment.

PubMed ID: 24589341

DOI: 10.1016/j.jaci.2014.02.013

PubMed ID: 24698316

Title: Hypomorphic homozygous mutations in phosphoglucomutase 3 (PGM3) impair immunity and increase serum IgE levels.

PubMed ID: 24698316

DOI: 10.1016/j.jaci.2014.02.025

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 12174217

Title: Identification of human phosphoglucomutase 3 (PGM3) as N-acetylglucosamine-phosphate mutase (AGM1).

PubMed ID: 12174217

DOI: 10.1017/s0003480002001033

Sequence Information:

  • Length: 542
  • Mass: 59852
  • Checksum: 6A4FBCD99A2154A9
  • Sequence:
  • MDLGAITKYS ALHAKPNGLI LQYGTAGFRT KAEHLDHVMF RMGLLAVLRS KQTKSTIGVM 
    VTASHNPEED NGVKLVDPLG EMLAPSWEEH ATCLANAEEQ DMQRVLIDIS EKEAVNLQQD 
    AFVVIGRDTR PSSEKLSQSV IDGVTVLGGQ FHDYGLLTTP QLHYMVYCRN TGGRYGKATI 
    EGYYQKLSKA FVELTKQASC SGDEYRSLKV DCANGIGALK LREMEHYFSQ GLSVQLFNDG 
    SKGKLNHLCG ADFVKSHQKP PQGMEIKSNE RCCSFDGDAD RIVYYYHDAD GHFHLIDGDK 
    IATLISSFLK ELLVEIGESL NIGVVQTAYA NGSSTRYLEE VMKVPVYCTK TGVKHLHHKA 
    QEFDIGVYFE ANGHGTALFS TAVEMKIKQS AEQLEDKKRK AAKMLENIID LFNQAAGDAI 
    SDMLVIEAIL ALKGLTVQQW DALYTDLPNR QLKVQVADRR VISTTDAERQ AVTPPGLQEA 
    INDLVKKYKL SRAFVRPSGT EDVVRVYAEA DSQESADHLA HEVSLAVFQL AGGIGERPQP 
    GF

Genular Protein ID: 2317761499

Symbol: J3KN95_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

Sequence Information:

  • Length: 441
  • Mass: 49095
  • Checksum: 42EF02D2BFEC7289
  • Sequence:
  • MLAPSWEEHA TCLANAEEQD MQRVLIDISE KEAVNLQQDA FVVIGRDTRP SSEKLSQSVI 
    DGVTVLGGQF HDYGLLTTPQ LHYMVYCRNT GGRYGKATIE GYYQKLSKAF VELTKQASCS 
    GDEYRSLKVD CANGIGALKL REMEHYFSQG LSVQLFNDGS KGKLNHLCGA DFVKSHQKPP 
    QGMEIKSNER CCSFDGDADR IVYYYHDADG HFHLIDGDKI ATLISSFLKE LLVEIGESLN 
    IGVVQTAYAN GSSTRYLEEV MKVPVYCTKT GVKHLHHKAQ EFDIGVYFEA NGHGTALFST 
    AVEMKIKQSA EQLEDKKRKA AKMLENIIDL FNQAAGDAIS DMLVIEAILA LKGLTVQQWD 
    ALYTDLPNRQ LKVQVADRRV ISTTDAERQA VTPPGLQEAI NDLVKKYKLS RAFVRPSGTE 
    DVVRVYAEAD SQVRKCRSPC T