Details for: PPP2R5D

Gene ID: 5528

Symbol: PPP2R5D

Ensembl ID: ENSG00000112640

Description: protein phosphatase 2 regulatory subunit B'delta

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 98.1065
    Cell Significance Index: -15.2600
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 62.2133
    Cell Significance Index: -15.7800
  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 38.9855
    Cell Significance Index: -16.0600
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 35.8640
    Cell Significance Index: -14.5700
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 15.2711
    Cell Significance Index: -14.5800
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 13.4879
    Cell Significance Index: -16.6300
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 5.8196
    Cell Significance Index: -15.5900
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 5.0530
    Cell Significance Index: -15.5200
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 4.2828
    Cell Significance Index: -16.9000
  • Cell Name: epithelial cell of pancreas (CL0000083)
    Fold Change: 2.2593
    Cell Significance Index: 37.2300
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 1.1685
    Cell Significance Index: 115.6000
  • Cell Name: pulmonary interstitial fibroblast (CL0002241)
    Fold Change: 0.7936
    Cell Significance Index: 4.9100
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.7742
    Cell Significance Index: 84.2100
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.7599
    Cell Significance Index: 45.6200
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.6740
    Cell Significance Index: 135.2100
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.6690
    Cell Significance Index: 108.8000
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 0.6012
    Cell Significance Index: 12.8500
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.5814
    Cell Significance Index: 16.7500
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 0.5705
    Cell Significance Index: 66.4900
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.4942
    Cell Significance Index: 446.1800
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.4366
    Cell Significance Index: 30.1900
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 0.4148
    Cell Significance Index: 5.6600
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.4108
    Cell Significance Index: 81.5300
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 0.3962
    Cell Significance Index: 20.6400
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.3327
    Cell Significance Index: 119.3400
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.3323
    Cell Significance Index: 7.2000
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 0.3297
    Cell Significance Index: 5.2900
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.2431
    Cell Significance Index: 11.0200
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: 0.2336
    Cell Significance Index: 5.8400
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.2146
    Cell Significance Index: 38.6800
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.1996
    Cell Significance Index: 27.4100
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 0.1971
    Cell Significance Index: 5.7900
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.1860
    Cell Significance Index: 11.7200
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.1777
    Cell Significance Index: 9.2300
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: 0.1766
    Cell Significance Index: 7.8100
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: 0.1717
    Cell Significance Index: 6.5000
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.1676
    Cell Significance Index: 31.9000
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.1672
    Cell Significance Index: 12.8300
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.1408
    Cell Significance Index: 17.3100
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.1390
    Cell Significance Index: 2.9600
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.1378
    Cell Significance Index: 3.8500
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.1326
    Cell Significance Index: 15.6400
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.1299
    Cell Significance Index: 1.3500
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.1215
    Cell Significance Index: 53.7300
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.1084
    Cell Significance Index: 59.1900
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.0871
    Cell Significance Index: 4.0600
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 0.0870
    Cell Significance Index: 1.9100
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.0744
    Cell Significance Index: 4.5700
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.0470
    Cell Significance Index: 32.5200
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.0396
    Cell Significance Index: 1.3900
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 0.0389
    Cell Significance Index: 2.0400
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.0114
    Cell Significance Index: 0.7400
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.0091
    Cell Significance Index: 17.1400
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.0054
    Cell Significance Index: 7.3000
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.0048
    Cell Significance Index: 7.3800
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.0047
    Cell Significance Index: 0.6000
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 0.0020
    Cell Significance Index: 0.1100
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.0019
    Cell Significance Index: 3.5100
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0053
    Cell Significance Index: -2.3900
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.0056
    Cell Significance Index: -3.5800
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0131
    Cell Significance Index: -9.5800
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.0176
    Cell Significance Index: -2.5700
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0183
    Cell Significance Index: -13.8400
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0213
    Cell Significance Index: -15.7900
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.0251
    Cell Significance Index: -0.4300
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.0256
    Cell Significance Index: -1.7200
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0279
    Cell Significance Index: -15.7300
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0291
    Cell Significance Index: -18.2000
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.0371
    Cell Significance Index: -6.3400
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: -0.0379
    Cell Significance Index: -0.7400
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: -0.0441
    Cell Significance Index: -3.1200
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.0482
    Cell Significance Index: -13.8800
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0510
    Cell Significance Index: -5.2100
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -0.0711
    Cell Significance Index: -1.1900
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.0718
    Cell Significance Index: -9.2800
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -0.0757
    Cell Significance Index: -2.6300
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.0865
    Cell Significance Index: -18.2100
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.0951
    Cell Significance Index: -10.9000
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.1015
    Cell Significance Index: -3.2500
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -0.1059
    Cell Significance Index: -2.7900
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -0.1088
    Cell Significance Index: -2.9200
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -0.1288
    Cell Significance Index: -3.3100
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.1294
    Cell Significance Index: -6.0800
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -0.1341
    Cell Significance Index: -3.5800
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: -0.1359
    Cell Significance Index: -1.7400
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.1424
    Cell Significance Index: -2.9800
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.1438
    Cell Significance Index: -14.9700
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.1492
    Cell Significance Index: -11.1200
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: -0.1796
    Cell Significance Index: -5.1300
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.1817
    Cell Significance Index: -14.3900
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.1876
    Cell Significance Index: -4.5000
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -0.1892
    Cell Significance Index: -5.1500
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.1949
    Cell Significance Index: -11.9500
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.2191
    Cell Significance Index: -4.6500
  • Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
    Fold Change: -0.2790
    Cell Significance Index: -4.0000
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.2994
    Cell Significance Index: -4.4200
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.3009
    Cell Significance Index: -8.0500
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.3045
    Cell Significance Index: -9.9700
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.3064
    Cell Significance Index: -9.7600
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.3143
    Cell Significance Index: -9.0100

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Regulatory Subunit of PP2A:** PPP2R5D is a regulatory subunit of PP2A, a serine/threonine phosphatase that plays a central role in dephosphorylating and regulating various proteins. 2. **Multi-Faceted Signaling:** PPP2R5D is involved in numerous signaling pathways, including those related to immune responses, cell cycle regulation, and metabolism. 3. **High Expression Levels:** PPP2R5D is highly expressed in various cell types, including immune cells, neural cells, and epithelial cells, suggesting its widespread importance in cellular function. 4. **Subcellular Localization:** PPP2R5D is primarily localized to the cytoplasm, although it may also be found in the nucleus and mitochondria. **Pathways and Functions:** 1. **Adaptive Immune Response:** PPP2R5D is involved in the regulation of immune responses, including the activation of T cells and the production of cytokines. 2. **Cell Cycle Regulation:** PPP2R5D plays a role in regulating the cell cycle, particularly in the G2/M phase, by dephosphorylating and activating key proteins. 3. **Metabolism:** PPP2R5D is involved in the regulation of metabolic pathways, including glycolysis and glucose metabolism. 4. **Cytokine Signaling:** PPP2R5D is a key regulator of cytokine signaling, including the activation of NF-κB and the production of pro-inflammatory cytokines. 5. **Wnt Signaling:** PPP2R5D is involved in the regulation of Wnt signaling, which plays a critical role in cell proliferation, differentiation, and survival. **Clinical Significance:** 1. **Cancer:** Alterations in PPP2R5D expression have been associated with various types of cancer, including colorectal, breast, and lung cancer. 2. **Neurological Disorders:** PPP2R5D has been implicated in neurological disorders, including Alzheimer's disease, Parkinson's disease, and multiple sclerosis. 3. **Immune-Mediated Diseases:** PPP2R5D is involved in the regulation of immune-mediated diseases, including rheumatoid arthritis and lupus. 4. **Metabolic Disorders:** PPP2R5D has been linked to metabolic disorders, including diabetes and obesity. In conclusion, PPP2R5D is a multifunctional regulatory subunit of PP2A that plays a critical role in regulating various cellular processes, including immune responses, cell cycle regulation, and metabolism. Its involvement in multiple signaling pathways underscores its importance in maintaining cellular homeostasis and responding to environmental cues. Further research is necessary to fully elucidate the functions of PPP2R5D and its role in various diseases.

Genular Protein ID: 692994211

Symbol: 2A5D_HUMAN

Name: Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8703017

Title: The B56 family of protein phosphatase 2A (PP2A) regulatory subunits encodes differentiation-induced phosphoproteins that target PP2A to both nucleus and cytoplasm.

PubMed ID: 8703017

DOI: 10.1074/jbc.271.36.22081

PubMed ID: 9180267

Title: Molecular heterogeneity of the cDNA encoding a 74-kDa regulatory subunit (B'' or delta) of human protein phosphatase 2A.

PubMed ID: 9180267

DOI: 10.1016/s0014-5793(97)00392-x

PubMed ID: 8566219

Title: Molecular cloning of a 74-kDa regulatory subunit (B'' or delta) of human protein phosphatase 2A.

PubMed ID: 8566219

DOI: 10.1016/0014-5793(95)01500-0

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 19054851

Title: Human protein factory for converting the transcriptome into an in vitro-expressed proteome.

PubMed ID: 19054851

DOI: 10.1038/nmeth.1273

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 16541025

Title: Shugoshin collaborates with protein phosphatase 2A to protect cohesin.

PubMed ID: 16541025

DOI: 10.1038/nature04663

PubMed ID: 17525332

Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.

PubMed ID: 17525332

DOI: 10.1126/science.1140321

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22976297

Title: A key phosphorylation site in AC8 mediates regulation of Ca(2+)-dependent cAMP dynamics by an AC8-AKAP79-PKA signalling complex.

PubMed ID: 22976297

DOI: 10.1242/jcs.111427

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 37761890

Title: Novel Variants of PPP2R1A in Catalytic Subunit Binding Domain and Genotype-Phenotype Analysis in Neurodevelopmentally Delayed Patients.

PubMed ID: 37761890

DOI: 10.3390/genes14091750

PubMed ID: 25533962

Title: Large-scale discovery of novel genetic causes of developmental disorders.

PubMed ID: 25533962

DOI: 10.1038/nature14135

PubMed ID: 23033978

Title: Diagnostic exome sequencing in persons with severe intellectual disability.

PubMed ID: 23033978

DOI: 10.1056/nejmoa1206524

PubMed ID: 26168268

Title: B56delta-related protein phosphatase 2A dysfunction identified in patients with intellectual disability.

PubMed ID: 26168268

DOI: 10.1172/jci79860

Sequence Information:

  • Length: 602
  • Mass: 69992
  • Checksum: F15F71AF4E565387
  • Sequence:
  • MPYKLKKEKE PPKVAKCTAK PSSSGKDGGG ENTEEAQPQP QPQPQPQAQS QPPSSNKRPS 
    NSTPPPTQLS KIKYSGGPQI VKKERRQSSS RFNLSKNREL QKLPALKDSP TQEREELFIQ 
    KLRQCCVLFD FVSDPLSDLK FKEVKRAGLN EMVEYITHSR DVVTEAIYPE AVTMFSVNLF 
    RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRF LESPDFQPNI AKKYIDQKFV 
    LALLDLFDSE DPRERDFLKT ILHRIYGKFL GLRAYIRRQI NHIFYRFIYE TEHHNGIAEL 
    LEILGSIING FALPLKEEHK MFLIRVLLPL HKVKSLSVYH PQLAYCVVQF LEKESSLTEP 
    VIVGLLKFWP KTHSPKEVMF LNELEEILDV IEPSEFSKVM EPLFRQLAKC VSSPHFQVAE 
    RALYYWNNEY IMSLISDNAA RVLPIMFPAL YRNSKSHWNK TIHGLIYNAL KLFMEMNQKL 
    FDDCTQQYKA EKQKGRFRMK EREEMWQKIE ELARLNPQYP MFRAPPPLPP VYSMETETPT 
    AEDIQLLKRT VETEAVQMLK DIKKEKVLLR RKSELPQDVY TIKALEAHKR AEEFLTASQE 
    AL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.