Details for: RFX5
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 61.9755
Cell Significance Index: -9.6400 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 31.3038
Cell Significance Index: -7.9400 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 8.6216
Cell Significance Index: -10.6300 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 3.9942
Cell Significance Index: -10.7000 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: 3.3653
Cell Significance Index: 55.4600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 2.7927
Cell Significance Index: -11.0200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 2.3583
Cell Significance Index: 233.2900 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 2.2856
Cell Significance Index: -7.0200 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 1.7408
Cell Significance Index: -3.8100 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.5449
Cell Significance Index: 106.8400 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.0481
Cell Significance Index: 946.3800 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.8727
Cell Significance Index: 52.3900 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.8561
Cell Significance Index: 93.1200 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.8441
Cell Significance Index: 99.5500 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.7088
Cell Significance Index: 115.2900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.5489
Cell Significance Index: 35.4200 - Cell Name: decidual cell (CL2000002)
Fold Change: 0.5217
Cell Significance Index: 8.3700 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.4050
Cell Significance Index: 11.6700 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.3394
Cell Significance Index: 4.6300 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.3325
Cell Significance Index: 9.0500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.3255
Cell Significance Index: 37.9300 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.3217
Cell Significance Index: 16.7100 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.3150
Cell Significance Index: 8.4400 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.3041
Cell Significance Index: 8.9300 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.2793
Cell Significance Index: 6.0500 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.2499
Cell Significance Index: 13.1200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.1603
Cell Significance Index: 5.5700 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.1492
Cell Significance Index: 3.9900 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1279
Cell Significance Index: 16.5300 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1174
Cell Significance Index: 64.1100 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.1072
Cell Significance Index: 4.8600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1006
Cell Significance Index: 19.1400 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0964
Cell Significance Index: 17.3800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0930
Cell Significance Index: 33.3600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0854
Cell Significance Index: 3.0000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.0841
Cell Significance Index: 2.3500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0830
Cell Significance Index: 16.4700 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.0801
Cell Significance Index: 1.3400 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0759
Cell Significance Index: 9.3300 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0682
Cell Significance Index: 13.6800 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0681
Cell Significance Index: 1.4500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0677
Cell Significance Index: 29.9200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0669
Cell Significance Index: 3.1200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0664
Cell Significance Index: 8.5200 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0636
Cell Significance Index: 8.7400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0567
Cell Significance Index: 2.6600 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 0.0546
Cell Significance Index: 0.6200 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0520
Cell Significance Index: 35.9900 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 0.0519
Cell Significance Index: 1.5300 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.0501
Cell Significance Index: 1.0400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.0358
Cell Significance Index: 2.6700 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.0145
Cell Significance Index: 0.3800 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.0016
Cell Significance Index: 0.0300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0000
Cell Significance Index: -0.0400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0020
Cell Significance Index: -1.4800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0059
Cell Significance Index: -10.9200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0065
Cell Significance Index: -9.9300 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0083
Cell Significance Index: -6.1100 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0090
Cell Significance Index: -0.9200 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0095
Cell Significance Index: -12.9600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0100
Cell Significance Index: -6.3600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0150
Cell Significance Index: -11.1300 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0187
Cell Significance Index: -8.4900 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0190
Cell Significance Index: -10.7300 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0218
Cell Significance Index: -13.6200 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0242
Cell Significance Index: -1.7100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0261
Cell Significance Index: -7.5000 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0349
Cell Significance Index: -5.0700 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0432
Cell Significance Index: -7.3700 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0604
Cell Significance Index: -12.7200 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0620
Cell Significance Index: -7.1000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.0660
Cell Significance Index: -1.6500 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.0685
Cell Significance Index: -1.7500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0756
Cell Significance Index: -2.4200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0849
Cell Significance Index: -5.3500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0858
Cell Significance Index: -2.4600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0908
Cell Significance Index: -6.9700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1014
Cell Significance Index: -6.2300 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1019
Cell Significance Index: -10.6100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1161
Cell Significance Index: -2.4300 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1314
Cell Significance Index: -10.4100 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1338
Cell Significance Index: -7.5100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1387
Cell Significance Index: -9.3300 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.1639
Cell Significance Index: -2.4700 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: -0.1673
Cell Significance Index: -1.0400 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.1697
Cell Significance Index: -6.9500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.1871
Cell Significance Index: -11.4700 - Cell Name: peg cell (CL4033014)
Fold Change: -0.1874
Cell Significance Index: -4.3300 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.1898
Cell Significance Index: -9.5900 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.2003
Cell Significance Index: -2.8100 - Cell Name: vascular lymphangioblast (CL0005022)
Fold Change: -0.2105
Cell Significance Index: -3.7200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.2273
Cell Significance Index: -6.0700 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: -0.2307
Cell Significance Index: -2.9600 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.2351
Cell Significance Index: -8.6300 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2376
Cell Significance Index: -10.5100 - Cell Name: thyroid follicular cell (CL0002258)
Fold Change: -0.2381
Cell Significance Index: -2.5300 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.2396
Cell Significance Index: -2.4800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.2466
Cell Significance Index: -6.3400 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.2485
Cell Significance Index: -8.7100 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.2727
Cell Significance Index: -3.9100
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 72365885
Symbol: RFX5_HUMAN
Name: DNA-binding protein RFX5
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7744245
Title: A novel DNA-binding regulatory factor is mutated in primary MHC class II deficiency (bare lymphocyte syndrome).
PubMed ID: 7744245
DOI: 10.1101/gad.9.9.1021
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10072068
Title: RFX-B is the gene responsible for the most common cause of the bare lymphocyte syndrome, an MHC class II immunodeficiency.
PubMed ID: 10072068
PubMed ID: 9401005
Title: Analysis of mutations and chromosomal localisation of the gene encoding RFX5, a novel transcription factor affected in major histocompatibility complex class II deficiency.
PubMed ID: 9401005
DOI: 10.1002/(sici)1098-1004(1997)10:6<430::aid-humu3>3.0.co;2-h
PubMed ID: 10779326
Title: A functionally essential domain of RFX5 mediates activation of major histocompatibility complex class II promoters by promoting cooperative binding between RFX and NF-Y.
PubMed ID: 10779326
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24129315
Title: Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.
PubMed ID: 24129315
PubMed ID: 20732328
Title: Solution structure of the heterotrimeric complex between the interaction domains of RFX5 and RFXAP from the RFX gene regulatory complex.
PubMed ID: 20732328
PubMed ID: 22649097
Title: Sequence-specific recognition of a PxLPxI/L motif by an ankyrin repeat tumbler lock.
PubMed ID: 22649097
PubMed ID: 10825209
Title: Mutations in the bare lymphocyte syndrome define critical steps in the assembly of the regulatory factor X complex.
PubMed ID: 10825209
PubMed ID: 30170160
Title: MHC-II Deficiency Among Egyptians: Novel Mutations and Unique Phenotypes.
PubMed ID: 30170160
PubMed ID: 37584719
Title: Clinical, Immunological, and Genetic Findings in Iranian Patients with MHC-II Deficiency: Confirmation of c.162delG RFXANK Founder Mutation in the Iranian Population.
PubMed ID: 37584719
Sequence Information:
- Length: 616
- Mass: 65323
- Checksum: 5EBB33C677BB717F
- Sequence:
MAEDEPDAKS PKTGGRAPPG GAEAGEPTTL LQRLRGTISK AVQNKVEGIL QDVQKFSDND KLYLYLQLPS GPTTGDKSSE PSTLSNEEYM YAYRWIRNHL EEHTDTCLPK QSVYDAYRKY CESLACCRPL STANFGKIIR EIFPDIKARR LGGRGQSKYC YSGIRRKTLV SMPPLPGLDL KGSESPEMGP EVTPAPRDEL VEAACALTCD WAERILKRSF SSIVEVARFL LQQHLISARS AHAHVLKAMG LAEEDEHAPR ERSSKPKNGL ENPEGGAHKK PERLAQPPKD LEARTGAGPL ARGERKKSVV ESSAPGANNL QVNALVARLP LLLPRAPRSL IPPIPVSPPI LAPRLSSGAL KVATLPLSSR AGAPPAAVPI INMILPTVPA LPGPGPGPGR APPGGLTQPR GTENREVGIG GDQGPHDKGV KRTAEVPVSE ASGQAPPAKA AKQDIEDTAS DAKRKRGRPR KKSGGSGERN STPLKSAAAM ESAQSSRLPW ETWGSGGEGN SAGGAERPGP MGEAEKGAVL AQGQGDGTVS KGGRGPGSQH TKEAEDKIPL VPSKVSVIKG SRSQKEAFPL AKGEVDTAPQ GNKDLKEHVL QSSLSQEHKD PKATPP
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.