Details for: SFSWAP

Gene ID: 6433

Symbol: SFSWAP

Ensembl ID: ENSG00000061936

Description: splicing factor SWAP

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 306.4703
    Cell Significance Index: -47.6700
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 187.2708
    Cell Significance Index: -47.5000
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 114.1864
    Cell Significance Index: -53.9100
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 109.4873
    Cell Significance Index: -44.4800
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 98.3504
    Cell Significance Index: -50.5900
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 46.8817
    Cell Significance Index: -44.7600
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 41.4127
    Cell Significance Index: -51.0600
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 18.4444
    Cell Significance Index: -49.4100
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 13.5864
    Cell Significance Index: -41.7300
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 13.1803
    Cell Significance Index: -52.0100
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 10.6576
    Cell Significance Index: -23.3300
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.9005
    Cell Significance Index: 381.2300
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.6164
    Cell Significance Index: 320.7800
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 1.1095
    Cell Significance Index: 62.2600
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 1.0379
    Cell Significance Index: 372.2900
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 1.0197
    Cell Significance Index: 26.2100
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 0.9997
    Cell Significance Index: 13.6400
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.9651
    Cell Significance Index: 25.7700
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.8470
    Cell Significance Index: 54.6500
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.8415
    Cell Significance Index: 64.5800
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.8407
    Cell Significance Index: 91.4500
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.8102
    Cell Significance Index: 131.7800
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.8019
    Cell Significance Index: 98.6000
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: 0.7691
    Cell Significance Index: 15.0100
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.7586
    Cell Significance Index: 136.7500
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.7332
    Cell Significance Index: 21.1300
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.6844
    Cell Significance Index: 31.0200
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.6831
    Cell Significance Index: 93.8100
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.6245
    Cell Significance Index: 431.9400
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.5848
    Cell Significance Index: 35.9500
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.5793
    Cell Significance Index: 16.1900
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.5578
    Cell Significance Index: 55.1800
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.5576
    Cell Significance Index: 12.0800
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: 0.5057
    Cell Significance Index: 22.3700
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.4605
    Cell Significance Index: 251.4700
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: 0.4340
    Cell Significance Index: 10.8500
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.4287
    Cell Significance Index: 189.5400
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 0.4062
    Cell Significance Index: 21.1600
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: 0.3465
    Cell Significance Index: 13.1200
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.3460
    Cell Significance Index: 23.9300
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 0.2347
    Cell Significance Index: 11.0300
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: 0.2103
    Cell Significance Index: 14.1400
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.1980
    Cell Significance Index: 12.4800
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.1977
    Cell Significance Index: 10.2700
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.1730
    Cell Significance Index: 6.0800
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 0.1528
    Cell Significance Index: 4.3800
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.1459
    Cell Significance Index: 17.2100
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 0.1201
    Cell Significance Index: 3.2700
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.1152
    Cell Significance Index: 216.8500
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.1137
    Cell Significance Index: 14.5800
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.0862
    Cell Significance Index: 158.9600
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.0837
    Cell Significance Index: 53.1400
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.0825
    Cell Significance Index: 127.0400
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 0.0780
    Cell Significance Index: 35.3800
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.0699
    Cell Significance Index: 3.2600
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.0513
    Cell Significance Index: 8.7600
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.0464
    Cell Significance Index: 41.9300
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.0405
    Cell Significance Index: 55.0900
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.0010
    Cell Significance Index: 0.0700
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0167
    Cell Significance Index: -12.3400
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -0.0180
    Cell Significance Index: -0.2200
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.0195
    Cell Significance Index: -2.5200
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0351
    Cell Significance Index: -25.7100
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.0356
    Cell Significance Index: -5.1800
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0433
    Cell Significance Index: -27.0100
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: -0.0456
    Cell Significance Index: -8.6700
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0529
    Cell Significance Index: -40.0700
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0611
    Cell Significance Index: -34.4500
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0977
    Cell Significance Index: -9.9800
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.1496
    Cell Significance Index: -31.5000
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1614
    Cell Significance Index: -46.4300
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.1880
    Cell Significance Index: -14.0100
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.1901
    Cell Significance Index: -4.5600
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.2175
    Cell Significance Index: -11.4200
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.2317
    Cell Significance Index: -26.5500
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.2352
    Cell Significance Index: -4.0300
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: -0.3353
    Cell Significance Index: -39.0700
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: -0.3469
    Cell Significance Index: -4.9900
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: -0.3555
    Cell Significance Index: -10.1500
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -0.3897
    Cell Significance Index: -5.8400
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.3979
    Cell Significance Index: -41.4300
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -0.4117
    Cell Significance Index: -6.8900
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -0.4238
    Cell Significance Index: -48.3800
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -0.4590
    Cell Significance Index: -12.0700
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.5178
    Cell Significance Index: -13.8500
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.5522
    Cell Significance Index: -27.9100
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.5755
    Cell Significance Index: -45.5800
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -0.5810
    Cell Significance Index: -3.5100
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: -0.5958
    Cell Significance Index: -12.7400
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: -0.6097
    Cell Significance Index: -13.3500
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -0.6337
    Cell Significance Index: -22.0200
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: -0.6446
    Cell Significance Index: -18.9300
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: -0.7373
    Cell Significance Index: -12.4200
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -0.7729
    Cell Significance Index: -20.7100
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.7916
    Cell Significance Index: -48.5300
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: -0.8604
    Cell Significance Index: -12.3600
  • Cell Name: periportal region hepatocyte (CL0019026)
    Fold Change: -0.8665
    Cell Significance Index: -12.7900
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: -0.8734
    Cell Significance Index: -8.0400
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.9205
    Cell Significance Index: -13.5900
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.9360
    Cell Significance Index: -29.8100

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Alternative Splicing**: SFSWAP is known to participate in alternative mRNA splicing, a process that allows for the generation of diverse protein isoforms from a single gene. This gene's involvement in spliceosome-mediated splicing highlights its importance in regulating the complexity of the transcriptome. 2. **Tissue-Specific Expression**: SFSWAP is expressed in a range of tissues, including the cerebral cortex, where it is localized to specific cell types, such as astrocytes, glutamatergic neurons, and GABAergic interneurons. This tissue-specific expression underscores the gene's potential role in regulating neuronal function and development. 3. **Interactions with Other Genes**: SFSWAP has been implicated in the regulation of other genes involved in neuronal function, including those involved in synaptic plasticity and neurotransmission. 4. **Evolutionary Conservation**: The presence of SFSWAP in various species, including humans, suggests that this gene has been conserved across evolution, highlighting its importance in maintaining fundamental cellular processes. **Pathways and Functions:** 1. **Alternative mRNA Splicing**: SFSWAP is involved in the regulation of alternative mRNA splicing via the spliceosome, a complex machinery responsible for the removal of introns and joining of exons to form a mature mRNA molecule. 2. **Negative Regulation of mRNA Splicing**: SFSWAP has been shown to negatively regulate mRNA splicing, a process that ensures the precise control of gene expression. 3. **Protein Binding**: SFSWAP interacts with other proteins, including those involved in RNA processing and transcription, highlighting its role in regulating the transcriptome. 4. **Nucleus**: SFSWAP is localized to the nucleus, where it participates in the regulation of mRNA splicing and other nuclear processes. **Clinical Significance:** 1. **Neurological Disorders**: Dysregulation of SFSWAP has been implicated in various neurological disorders, including autism spectrum disorder, schizophrenia, and epilepsy, highlighting the gene's potential role in regulating neuronal function and development. 2. **Cancer**: SFSWAP has been shown to be overexpressed in certain types of cancer, including breast and lung cancer, suggesting a potential role in tumorigenesis. 3. **Neurological Development**: SFSWAP's involvement in the regulation of neuronal development and function underscores the gene's importance in maintaining normal brain function and development. 4. **Therapeutic Potential**: The identification of SFSWAP as a potential therapeutic target for neurological disorders highlights the need for further research into the gene's role in disease pathology and its potential as a treatment strategy. In conclusion, SFSWAP is a gene of significant interest, given its involvement in alternative mRNA splicing, neuronal function, and development. Further research into the gene's role in disease pathology and its potential as a therapeutic target is warranted, highlighting the importance of continued investigation into the complex mechanisms underlying SFSWAP's functions.

Genular Protein ID: 17577985

Symbol: SFSWA_HUMAN

Name: Splicing factor, suppressor of white-apricot homolog

UniProtKB Accession Codes:

Q12872 B2RN45 B7ZM97 F5H6B8 Q6PJF7

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CTD 1 ChiTaRS 1 DMDM 1 DNASU 1 DisGeNET 1 EMBL 8 Ensembl 2 EvolutionaryTrace 1 ExpressionAtlas 1 GO 5 Gene3D 1 GeneCards 1 GeneTree 1 GenomeRNAi 1 GlyGen 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 4 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 2 PDBsum 2 PIR 3 PRO 1 PROSITE 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 2 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 2 Pumba 1 RNAct 1 RefSeq 2 SMART 2 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 8206918

Title: Conservation of regulated alternative splicing and identification of functional domains in vertebrate homologs to the Drosophila splicing regulator, suppressor-of-white-apricot.

PubMed ID: 8206918

DOI: 10.1016/s0021-9258(17)33989-3

PubMed ID: 16541075

Title: The finished DNA sequence of human chromosome 12.

PubMed ID: 16541075

DOI: 10.1038/nature04569

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8940107

Title: The mammalian homolog of suppressor-of-white-apricot regulates alternative mRNA splicing of CD45 exon 4 and fibronectin IIICS.

PubMed ID: 8940107

DOI: 10.1074/jbc.271.49.31106

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 17525332

Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.

PubMed ID: 17525332

DOI: 10.1126/science.1140321

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

Sequence Information:

  • Length: 951
  • Mass: 104822
  • Checksum: A942D589F4B6BF47
  • Sequence:
    • MYGASGGRAK PERKSGAKEE AGPGGAGGGG SRVELLVFGY ACKLFRDDER ALAQEQGQHL 
IPWMGDHKIL IDRYDGRGHL HDLSEYDAEY STWNRDYQLS EEEARIEALC DEERYLALHT 
DLLEEEARQE EEYKRLSEAL AEDGSYNAVG FTYGSDYYDP SEPTEEEEPS KQREKNEAEN 
LEENEEPFVA PLGLSVPSDV ELPPTAKMHA IIERTASFVC RQGAQFEIML KAKQARNSQF 
DFLRFDHYLN PYYKFIQKAM KEGRYTVLAE NKSDEKKKSG VSSDNEDDDD EEDGNYLHPS 
LFASKKCNRL EELMKPLKVV DPDHPLAALV RKAQADSSTP TPHNADGAPV QPSQVEYTAD 
STVAAMYYSY YMLPDGTYCL APPPPGIDVT TYYSTLPAGV TVSNSPGVTT TAPPPPGTTP 
LPPPTTAETS SGATSTTTTT SALAPVAAII PPPPDVQPVI DKLAEYVARN GLKFETSVRA 
KNDQRFEFLQ PWHQYNAYYE FKKQFFLQKE GGDSMQAVSA PEEAPTDSAP EKPSDAGEDG 
APEDAAEVGA RAGSGGKKEA SSSKTVPDGK LVKASFAPIS FAIKAKENDL LPLEKNRVKL 
DDDSDDDEES KEGQESSSSA ANTNPAVAPP CVVVEEKKPQ LTQEELEAKQ AKQKLEDRLA 
AAAREKLAQA SKESKEKQLQ AERKRKAALF LQTLKNPLPE AEAGKIEESP FSVEESSTTP 
CPLLTGGRPL PTLEVKPPDR PSSKSKDPPR EEEKEKKKKK HKKRSRTRSR SPKYHSSSKS 
RSRSHSKAKH SLPSAYRTVR RSRSRSRSPR RRAHSPERRR EERSVPTAYR VSRSPGASRK 
RTRSRSPHEK KKKRRSRSRT KSKARSQSVS PSKQAAPRPA APAAHSAHSA SVSPVESRGS 
SQERSRGVSQ EKEAQISSAI VSSVQSKITQ DLMAKVRAML AASKNLQTSA S

Genular Protein ID: 537464616

Symbol: Q8IV81_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q8IV81

Database IDs:

ARBA 2 AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 2 GO 2 Gene3D 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 PeptideAtlas 1 Pfam 2 RefSeq 1 SAM 1 SMART 2 SUPFAM 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 547
  • Mass: 60595
  • Checksum: 2425213C2C8B92B8
  • Sequence:
    • MGDHKILIDR YDGRGHLHDL SEYDAEYSTW NRDYQLSEEE ARIEALCDEE RYLALHTDLL 
EEEARQEEEY KRLSEALAED GSYNAVGFTY GSDYYDPSEP TEEEEPSKQR EKNEAENLEE 
NEEPFVAPLG LSVPSDVELP PTAKMHAIIE RTASFVCRQG AQFEIMLKAK QARNSQFDFL 
RFDHYLNPYY KFIQKAMKEG RYTVLAENKS DEKKKSGVSS DNEDDDDEED GNYLHPSLFA 
SKKCNRLEEL MKPLKVVDPD HPLAALVRKA QADSSTPTPH NADGAPVQPS QVEYTADSTV 
AAMYYSYYML PDGTYCLAPP PPGIDVTTYY STLPAGVTVS NSPGVTTTAP PPPGTTPPPP 
PTTAETSSGA TSTTTTTSAL APVAAIIPPP PDVQPVIDKL AEYVARNGLK FETSVRAKND 
QRFEFLQPWH QYNAYYEFKK QFFLQKEGGD SMQAVSAPEE APTDSAPEKP SDAGEDGAPE 
DAAEVGARAG SGGKKEASSS KTVPDGKLVK ASFAPISFAI KAKENDLLPL EKKKKKKKKK 
KKKKKKK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.