Details for: SNCA
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 102.1513
Cell Significance Index: -25.9100 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 75.2280
Cell Significance Index: -30.9900 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 58.9441
Cell Significance Index: -30.3200 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 12.0334
Cell Significance Index: -36.9600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 8.8012
Cell Significance Index: -34.7300 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 8.0920
Cell Significance Index: -17.7100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 6.3972
Cell Significance Index: 109.6300 - Cell Name: midget ganglion cell of retina (CL4023188)
Fold Change: 3.8740
Cell Significance Index: 40.3600 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 3.6554
Cell Significance Index: 22.6200 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 3.4699
Cell Significance Index: 182.1900 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 3.1058
Cell Significance Index: 88.6300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 2.8114
Cell Significance Index: 1008.4100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.8062
Cell Significance Index: 562.9300 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 2.5120
Cell Significance Index: 111.1100 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 2.4425
Cell Significance Index: 30.3000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 2.3441
Cell Significance Index: 157.6200 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 2.3069
Cell Significance Index: 87.3600 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 1.3547
Cell Significance Index: 157.8700 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 1.1826
Cell Significance Index: 225.0600 - Cell Name: L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (CL4023050)
Fold Change: 1.1522
Cell Significance Index: 15.3700 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.0703
Cell Significance Index: 60.0600 - Cell Name: melanocyte of skin (CL1000458)
Fold Change: 0.9571
Cell Significance Index: 13.4200 - Cell Name: kidney cell (CL1000497)
Fold Change: 0.8166
Cell Significance Index: 6.5200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.8033
Cell Significance Index: 79.4600 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.8027
Cell Significance Index: 49.3400 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.7278
Cell Significance Index: 657.1700 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.4991
Cell Significance Index: 12.7500 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.3738
Cell Significance Index: 60.8000 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.3724
Cell Significance Index: 701.2200 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.3364
Cell Significance Index: 9.4000 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.2043
Cell Significance Index: 4.9000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.2032
Cell Significance Index: 22.1100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.1864
Cell Significance Index: 286.9900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.1762
Cell Significance Index: 31.7600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0814
Cell Significance Index: 51.7100 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0798
Cell Significance Index: 147.2200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0568
Cell Significance Index: 6.9800 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0519
Cell Significance Index: 70.5500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0383
Cell Significance Index: 16.9300 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0085
Cell Significance Index: 1.0900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0072
Cell Significance Index: 0.1800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0108
Cell Significance Index: -0.3800 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0160
Cell Significance Index: -8.7200 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0206
Cell Significance Index: -15.2400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0222
Cell Significance Index: -0.6400 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: -0.0269
Cell Significance Index: -1.8600 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0372
Cell Significance Index: -16.8900 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0384
Cell Significance Index: -2.3600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0386
Cell Significance Index: -28.2900 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0423
Cell Significance Index: -23.8800 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0435
Cell Significance Index: -32.9000 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0555
Cell Significance Index: -34.6400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0556
Cell Significance Index: -11.0400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0570
Cell Significance Index: -3.6800 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0803
Cell Significance Index: -3.6400 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.0858
Cell Significance Index: -0.7000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0917
Cell Significance Index: -2.9200 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0999
Cell Significance Index: -28.7300 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1008
Cell Significance Index: -13.8400 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.1168
Cell Significance Index: -2.5300 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1187
Cell Significance Index: -12.3600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1314
Cell Significance Index: -13.4200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1389
Cell Significance Index: -4.8300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1577
Cell Significance Index: -33.2200 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1610
Cell Significance Index: -23.4100 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1871
Cell Significance Index: -5.0100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.1967
Cell Significance Index: -10.2200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.1990
Cell Significance Index: -33.9800 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.2061
Cell Significance Index: -2.5700 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: -0.2127
Cell Significance Index: -12.7700 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.2290
Cell Significance Index: -29.5800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.2467
Cell Significance Index: -18.9300 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.2483
Cell Significance Index: -8.1300 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.2641
Cell Significance Index: -31.1400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.2731
Cell Significance Index: -4.5700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2889
Cell Significance Index: -33.1000 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.3105
Cell Significance Index: -21.9600 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.3194
Cell Significance Index: -3.4800 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.3247
Cell Significance Index: -10.4000 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3609
Cell Significance Index: -28.5800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.4114
Cell Significance Index: -30.6600 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.4191
Cell Significance Index: -5.2900 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.4296
Cell Significance Index: -18.6800 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.4337
Cell Significance Index: -8.5800 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: -0.4761
Cell Significance Index: -4.5300 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.4775
Cell Significance Index: -11.9100 - Cell Name: L6 corticothalamic-projecting glutamatergic cortical neuron (CL4023042)
Fold Change: -0.4863
Cell Significance Index: -5.3700 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.4934
Cell Significance Index: -25.7000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.5110
Cell Significance Index: -10.6000 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.5220
Cell Significance Index: -24.5400 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.5260
Cell Significance Index: -33.1500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.5334
Cell Significance Index: -14.5200 - Cell Name: theca cell (CL0000503)
Fold Change: -0.5668
Cell Significance Index: -3.3300 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.5768
Cell Significance Index: -11.5800 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.5886
Cell Significance Index: -12.5400 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.5922
Cell Significance Index: -18.7300 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.5955
Cell Significance Index: -13.0400 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: -0.5982
Cell Significance Index: -7.4000 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6077
Cell Significance Index: -17.9000 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.6117
Cell Significance Index: -21.4300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1474762581
Symbol: SYUA_HUMAN
Name: Alpha-synuclein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8248242
Title: Molecular cloning of cDNA encoding an unrecognized component of amyloid in Alzheimer disease.
PubMed ID: 8248242
PubMed ID: 7601450
Title: The NACP/synuclein gene: chromosomal assignment and screening for alterations in Alzheimer disease.
PubMed ID: 7601450
PubMed ID: 7802671
Title: Tissue-dependent alternative splicing of mRNA for NACP, the precursor of non-A beta component of Alzheimer's disease amyloid.
PubMed ID: 7802671
PubMed ID: 11156617
Title: Human and mouse alpha-synuclein genes: comparative genomic sequence analysis and identification of a novel gene regulatory element.
PubMed ID: 11156617
DOI: 10.1101/gr.165801
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8194594
Title: Identification of two distinct synucleins from human brain.
PubMed ID: 8194594
PubMed ID: 10617630
Title: Constitutive phosphorylation of the Parkinson's disease associated alpha-synuclein.
PubMed ID: 10617630
PubMed ID: 10852916
Title: Synucleins are a novel class of substrates for G protein-coupled receptor kinases.
PubMed ID: 10852916
PubMed ID: 11162638
Title: Activated Fyn phosphorylates alpha-synuclein at tyrosine residue 125.
PubMed ID: 11162638
PubMed ID: 11821392
Title: Alpha-synuclein interacts with phospholipase D isozymes and inhibits pervanadate-induced phospholipase D activation in human embryonic kidney-293 cells.
PubMed ID: 11821392
PubMed ID: 11813001
Title: alpha-Synuclein is phosphorylated in synucleinopathy lesions.
PubMed ID: 11813001
DOI: 10.1038/ncb748
PubMed ID: 12859192
Title: Nuclear localization of alpha-synuclein and its interaction with histones.
PubMed ID: 12859192
DOI: 10.1021/bi0341152
PubMed ID: 12859200
Title: Role of alpha-synuclein carboxy-terminus on fibril formation in vitro.
PubMed ID: 12859200
DOI: 10.1021/bi027363r
PubMed ID: 12558071
Title: Recent advances on alpha-synuclein cell biology: functions and dysfunctions.
PubMed ID: 12558071
PubMed ID: 12893833
Title: Identification and characterization of a novel Pyk2/related adhesion focal tyrosine kinase-associated protein that inhibits alpha-synuclein phosphorylation.
PubMed ID: 12893833
PubMed ID: 15207266
Title: Abnormal alpha-synuclein interactions with rab3a and rabphilin in diffuse Lewy body disease.
PubMed ID: 15207266
PubMed ID: 15282274
Title: Lipid rafts mediate the synaptic localization of alpha-synuclein.
PubMed ID: 15282274
PubMed ID: 19722699
Title: Characterization of hydrophobic residue requirements for alpha-synuclein fibrillization.
PubMed ID: 19722699
DOI: 10.1021/bi900539p
PubMed ID: 20798282
Title: Alpha-synuclein promotes SNARE-complex assembly in vivo and in vitro.
PubMed ID: 20798282
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21319811
Title: Coordination features and affinity of the Cu(2)+ site in the alpha-synuclein protein of Parkinson's disease.
PubMed ID: 21319811
DOI: 10.1021/bi101912q
PubMed ID: 21841800
Title: alpha-Synuclein occurs physiologically as a helically folded tetramer that resists aggregation.
PubMed ID: 21841800
DOI: 10.1038/nature10324
PubMed ID: 22854022
Title: SERF protein is a direct modifier of amyloid fiber assembly.
PubMed ID: 22854022
PubMed ID: 22407793
Title: N-Terminal acetylation is critical for forming alpha-helical oligomer of alpha-synuclein.
PubMed ID: 22407793
DOI: 10.1002/pro.2056
PubMed ID: 26442590
Title: Dopamine Transporter Activity Is Modulated by alpha-Synuclein.
PubMed ID: 26442590
PubMed ID: 27597756
Title: Munc18-1 is a molecular chaperone for alpha-synuclein, controlling its self-replicating aggregation.
PubMed ID: 27597756
PubMed ID: 28288128
Title: alpha-Synuclein promotes dilation of the exocytotic fusion pore.
PubMed ID: 28288128
DOI: 10.1038/nn.4529
PubMed ID: 30404828
Title: Soluble alpha-synuclein facilitates priming and fusion by releasing Ca2+ from the thapsigargin-sensitive Ca2+ pool in PC12 cells.
PubMed ID: 30404828
DOI: 10.1242/jcs.213017
PubMed ID: 31034892
Title: Increased Aggregation Tendency of Alpha-Synuclein in a Fully Disordered Protein Complex.
PubMed ID: 31034892
PubMed ID: 15615727
Title: Structure and dynamics of micelle-bound human alpha-synuclein.
PubMed ID: 15615727
PubMed ID: 19762560
Title: Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.
PubMed ID: 19762560
DOI: 10.1096/fj.09-133082
PubMed ID: 21462277
Title: Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation.
PubMed ID: 21462277
DOI: 10.1002/pro.630
PubMed ID: 23607618
Title: NMR structure of calmodulin complexed to an N-terminally acetylated alpha-synuclein peptide.
PubMed ID: 23607618
DOI: 10.1021/bi400199p
PubMed ID: 26352473
Title: Structure of the toxic core of alpha-synuclein from invisible crystals.
PubMed ID: 26352473
DOI: 10.1038/nature15368
PubMed ID: 27018801
Title: Solid-state NMR structure of a pathogenic fibril of full-length human alpha-synuclein.
PubMed ID: 27018801
DOI: 10.1038/nsmb.3194
PubMed ID: 30190461
Title: Cryo-EM of full-length alpha-synuclein reveals fibril polymorphs with a common structural kernel.
PubMed ID: 30190461
PubMed ID: 9197268
Title: Mutation in the alpha-synuclein gene identified in families with Parkinson's disease.
PubMed ID: 9197268
PubMed ID: 9462735
Title: Ala30Pro mutation in the gene encoding alpha-synuclein in Parkinson's disease.
PubMed ID: 9462735
DOI: 10.1038/ng0298-106
PubMed ID: 14755719
Title: The new mutation, E46K, of alpha-synuclein causes Parkinson and Lewy body dementia.
PubMed ID: 14755719
DOI: 10.1002/ana.10795
PubMed ID: 15498564
Title: Mutation E46K increases phospholipid binding and assembly into filaments of human alpha-synuclein.
PubMed ID: 15498564
PubMed ID: 23457019
Title: Alpha-synuclein p.H50Q, a novel pathogenic mutation for Parkinson's disease.
PubMed ID: 23457019
DOI: 10.1002/mds.25421
PubMed ID: 23427326
Title: A novel alpha-synuclein missense mutation in Parkinson disease.
PubMed ID: 23427326
PubMed ID: 24936070
Title: The H50Q mutation enhances alpha-synuclein aggregation, secretion, and toxicity.
PubMed ID: 24936070
PubMed ID: 25561023
Title: Molecular determinants of alpha-synuclein mutants' oligomerization and membrane interactions.
PubMed ID: 25561023
DOI: 10.1021/cn500332w
Sequence Information:
- Length: 140
- Mass: 14460
- Checksum: 6BB2F12128931663
- Sequence:
MDVFMKGLSK AKEGVVAAAE KTKQGVAEAA GKTKEGVLYV GSKTKEGVVH GVATVAEKTK EQVTNVGGAV VTGVTAVAQK TVEGAGSIAA ATGFVKKDQL GKNEEGAPQE GILEDMPVDP DNEAYEMPSE EGYQDYEPEA
Genular Protein ID: 2184757065
Symbol: H6UYS5_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 112
- Mass: 11372
- Checksum: 16EA234777EFA89E
- Sequence:
MDVFMKGLSK AKEGVVAAAE KTKQGVAEAA GKTKEGVLYV GSKTKEGVVH GVATVAEKTK EQVTNVGGAV VTGVTAVAQK TVEGAGSIAA ATGFVKKDQL GKEGYQDYEP EA
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.