Details for: TNF
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: B-2 B cell (CL0000822)
Fold Change: 2.08
Marker Score: 2564 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 1.62
Marker Score: 10363 - Cell Name: eurydendroid cell (CL0000253)
Fold Change: 1.32
Marker Score: 540 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 1.25
Marker Score: 885 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 1.24
Marker Score: 837 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.17
Marker Score: 849 - Cell Name: goblet cell (CL0000160)
Fold Change: 1.15
Marker Score: 7633 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 1.14
Marker Score: 4785 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 1.14
Marker Score: 473 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30404 - Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
Fold Change: 0.98
Marker Score: 829.5 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.96
Marker Score: 495 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.95
Marker Score: 449 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2409 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
Fold Change: 0.94
Marker Score: 2623 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.93
Marker Score: 5321 - Cell Name: follicular B cell (CL0000843)
Fold Change: 0.93
Marker Score: 1004 - Cell Name: double negative thymocyte (CL0002489)
Fold Change: 0.92
Marker Score: 1275 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.91
Marker Score: 2728 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.91
Marker Score: 363 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.88
Marker Score: 316 - Cell Name: Kupffer cell (CL0000091)
Fold Change: 0.88
Marker Score: 877 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5273 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.85
Marker Score: 29542 - Cell Name: decidual natural killer cell, human (CL0002343)
Fold Change: 0.81
Marker Score: 2248 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.81
Marker Score: 816 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.8
Marker Score: 44508 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.78
Marker Score: 596 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1260 - Cell Name: brush cell (CL0002204)
Fold Change: 0.76
Marker Score: 695 - Cell Name: memory T cell (CL0000813)
Fold Change: 0.76
Marker Score: 325 - Cell Name: classical monocyte (CL0000860)
Fold Change: 0.74
Marker Score: 3087 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 0.72
Marker Score: 3555 - Cell Name: mammary gland epithelial cell (CL0002327)
Fold Change: 0.72
Marker Score: 255 - Cell Name: activated CD4-positive, alpha-beta T cell (CL0000896)
Fold Change: 0.71
Marker Score: 516 - Cell Name: keratinocyte (CL0000312)
Fold Change: 0.7
Marker Score: 584 - Cell Name: T-helper 1 cell (CL0000545)
Fold Change: 0.69
Marker Score: 270 - Cell Name: CD4-positive, alpha-beta cytotoxic T cell (CL0000934)
Fold Change: 0.69
Marker Score: 606 - Cell Name: hematopoietic cell (CL0000988)
Fold Change: 0.68
Marker Score: 450 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.67
Marker Score: 172 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.67
Marker Score: 1075 - Cell Name: pro-B cell (CL0000826)
Fold Change: 0.62
Marker Score: 596 - Cell Name: T-helper 22 cell (CL0001042)
Fold Change: 0.6
Marker Score: 2594 - Cell Name: CD14-positive, CD16-positive monocyte (CL0002397)
Fold Change: 0.59
Marker Score: 1158 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.57
Marker Score: 367 - Cell Name: activated CD8-positive, alpha-beta T cell (CL0000906)
Fold Change: 0.57
Marker Score: 411 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.56
Marker Score: 443 - Cell Name: DN1 thymic pro-T cell (CL0000894)
Fold Change: 0.55
Marker Score: 172 - Cell Name: mature gamma-delta T cell (CL0000800)
Fold Change: 0.55
Marker Score: 1735 - Cell Name: B-1 B cell (CL0000819)
Fold Change: 0.55
Marker Score: 958 - Cell Name: CD1c-positive myeloid dendritic cell (CL0002399)
Fold Change: 0.55
Marker Score: 1423 - Cell Name: mucosal invariant T cell (CL0000940)
Fold Change: 0.54
Marker Score: 480 - Cell Name: NKp46-positive innate lymphoid cell, human (CL0001076)
Fold Change: 0.54
Marker Score: 1566 - Cell Name: glandular epithelial cell (CL0000150)
Fold Change: 0.53
Marker Score: 1310 - Cell Name: leukocyte (CL0000738)
Fold Change: 0.53
Marker Score: 303 - Cell Name: kidney loop of Henle epithelial cell (CL1000909)
Fold Change: 0.52
Marker Score: 329 - Cell Name: type I NK T cell (CL0000921)
Fold Change: 0.52
Marker Score: 409 - Cell Name: CD4-positive, alpha-beta T cell (CL0000624)
Fold Change: 0.52
Marker Score: 1171 - Cell Name: late pro-B cell (CL0002048)
Fold Change: 0.52
Marker Score: 613 - Cell Name: natural T-regulatory cell (CL0000903)
Fold Change: 0.52
Marker Score: 265 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.52
Marker Score: 237 - Cell Name: effector memory CD8-positive, alpha-beta T cell (CL0000913)
Fold Change: 0.52
Marker Score: 317 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: 0.51
Marker Score: 282 - Cell Name: lymphocyte (CL0000542)
Fold Change: 0.49
Marker Score: 250 - Cell Name: medullary thymic epithelial cell (CL0002365)
Fold Change: 0.49
Marker Score: 809 - Cell Name: alveolar macrophage (CL0000583)
Fold Change: 0.49
Marker Score: 12572 - Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
Fold Change: 0.49
Marker Score: 413 - Cell Name: non-classical monocyte (CL0000875)
Fold Change: 0.47
Marker Score: 1136 - Cell Name: intermediate monocyte (CL0002393)
Fold Change: 0.47
Marker Score: 161 - Cell Name: myeloid leukocyte (CL0000766)
Fold Change: 0.46
Marker Score: 559 - Cell Name: Unknown (CL0000548)
Fold Change: 0.45
Marker Score: 331 - Cell Name: CD4-positive helper T cell (CL0000492)
Fold Change: 0.45
Marker Score: 491 - Cell Name: small pre-B-II cell (CL0000954)
Fold Change: 0.45
Marker Score: 539 - Cell Name: memory B cell (CL0000787)
Fold Change: 0.45
Marker Score: 339 - Cell Name: effector memory CD4-positive, alpha-beta T cell (CL0000905)
Fold Change: 0.44
Marker Score: 325 - Cell Name: elicited macrophage (CL0000861)
Fold Change: 0.44
Marker Score: 2664 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 0.44
Marker Score: 248 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: 0.43
Marker Score: 1078 - Cell Name: effector memory CD8-positive, alpha-beta T cell, terminally differentiated (CL0001062)
Fold Change: 0.43
Marker Score: 632 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.42
Marker Score: 134 - Cell Name: early lymphoid progenitor (CL0000936)
Fold Change: 0.42
Marker Score: 205.5 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.42
Marker Score: 276 - Cell Name: macrophage (CL0000235)
Fold Change: 0.41
Marker Score: 458 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: 0.4
Marker Score: 176 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.4
Marker Score: 106 - Cell Name: dendritic cell, human (CL0001056)
Fold Change: 0.4
Marker Score: 406 - Cell Name: lung macrophage (CL1001603)
Fold Change: 0.4
Marker Score: 456 - Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
Fold Change: 0.39
Marker Score: 671 - Cell Name: thymocyte (CL0000893)
Fold Change: 0.39
Marker Score: 409.5 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.38
Marker Score: 231 - Cell Name: centrocyte (CL0009111)
Fold Change: 0.38
Marker Score: 91 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.38
Marker Score: 159 - Cell Name: B cell (CL0000236)
Fold Change: 0.37
Marker Score: 348 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.36
Marker Score: 1345 - Cell Name: mature B cell (CL0000785)
Fold Change: 0.36
Marker Score: 263 - Cell Name: conventional dendritic cell (CL0000990)
Fold Change: 0.36
Marker Score: 247 - Cell Name: B-1b B cell (CL0000821)
Fold Change: 0.36
Marker Score: 82 - Cell Name: T-helper 17 cell (CL0000899)
Fold Change: 0.36
Marker Score: 233 - Cell Name: alpha-beta T cell (CL0000789)
Fold Change: 0.35
Marker Score: 266 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.35
Marker Score: 3555
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Other Information
Genular Protein ID: 2576552063
Symbol: TNFA_HUMAN
Name: Tumor necrosis factor
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 3555974
Title: Tandem arrangement of genes coding for tumor necrosis factor (TNF-alpha) and lymphotoxin (TNF-beta) in the human genome.
PubMed ID: 3555974
PubMed ID: 6392892
Title: Human tumour necrosis factor: precursor structure, expression and homology to lymphotoxin.
PubMed ID: 6392892
DOI: 10.1038/312724a0
PubMed ID: 3883195
Title: Cloning and expression in Escherichia coli of the gene for human tumour necrosis factor.
PubMed ID: 3883195
DOI: 10.1038/313803a0
PubMed ID: 2995927
Title: Human lymphotoxin and tumor necrosis factor genes: structure, homology and chromosomal localization.
PubMed ID: 2995927
PubMed ID: 3856324
Title: Molecular cloning of the complementary DNA for human tumor necrosis factor.
PubMed ID: 3856324
PubMed ID: 3932069
Title: Molecular cloning and expression of human tumor necrosis factor and comparison with mouse tumor necrosis factor.
PubMed ID: 3932069
PubMed ID: 8499947
Title: Dense Alu clustering and a potential new member of the NF kappa B family within a 90 kilobase HLA class III segment.
PubMed ID: 8499947
DOI: 10.1038/ng0293-137
PubMed ID: 10202016
Title: A new member of the Ig superfamily and a V-ATPase G subunit are among the predicted products of novel genes close to the TNF locus in the human MHC.
PubMed ID: 10202016
PubMed ID: 14656967
Title: Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse.
PubMed ID: 14656967
DOI: 10.1101/gr.1736803
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8631363
Title: O-glycosylated species of natural human tumor-necrosis factor-alpha.
PubMed ID: 8631363
PubMed ID: 8597870
Title: Phosphorylation of the 26 kDa TNF precursor in monocytic cells and in transfected HeLa cells.
PubMed ID: 8597870
PubMed ID: 10205166
Title: A casein kinase I motif present in the cytoplasmic domain of members of the tumour necrosis factor ligand family is implicated in 'reverse signalling'.
PubMed ID: 10205166
PubMed ID: 2009860
Title: Localization of the active site of human tumour necrosis factor (hTNF) by mutational analysis.
PubMed ID: 2009860
PubMed ID: 1402651
Title: Myristyl acylation of the tumor necrosis factor alpha precursor on specific lysine residues.
PubMed ID: 1402651
PubMed ID: 9034191
Title: Cloning of a disintegrin metalloproteinase that processes precursor tumour-necrosis factor-alpha.
PubMed ID: 9034191
DOI: 10.1038/385733a0
PubMed ID: 10369255
Title: A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria.
PubMed ID: 10369255
DOI: 10.1038/9649
PubMed ID: 12746914
Title: Cytokine gene polymorphisms: association with psoriatic arthritis susceptibility and severity.
PubMed ID: 12746914
DOI: 10.1002/art.10935
PubMed ID: 12794819
Title: Anti-interleukin-6 receptor antibody therapy reduces vascular endothelial growth factor production in rheumatoid arthritis.
PubMed ID: 12794819
DOI: 10.1002/art.11143
PubMed ID: 12915457
Title: Association of TNF-alpha promoter polymorphisms with the clearance of hepatitis B virus infection.
PubMed ID: 12915457
DOI: 10.1093/hmg/ddg262
PubMed ID: 16829952
Title: SPPL2a and SPPL2b promote intramembrane proteolysis of TNFalpha in activated dendritic cells to trigger IL-12 production.
PubMed ID: 16829952
DOI: 10.1038/ncb1440
PubMed ID: 16829951
Title: A gamma-secretase-like intramembrane cleavage of TNFalpha by the GxGD aspartyl protease SPPL2b.
PubMed ID: 16829951
DOI: 10.1038/ncb1450
PubMed ID: 22517918
Title: Smac mimetic enables the anticancer action of BCG-stimulated neutrophils through TNF-alpha but not through TRAIL and FasL.
PubMed ID: 22517918
DOI: 10.1189/jlb.1211623
PubMed ID: 23552949
Title: SIRT6 regulates TNF-alpha secretion through hydrolysis of long-chain fatty acyl lysine.
PubMed ID: 23552949
DOI: 10.1038/nature12038
PubMed ID: 23396208
Title: Phosphorylation of FOXP3 controls regulatory T cell function and is inhibited by TNF-alpha in rheumatoid arthritis.
PubMed ID: 23396208
DOI: 10.1038/nm.3085
PubMed ID: 2922050
PubMed ID: 1964681
Title: The structure of tumour necrosis factor -- implications for biological function.
PubMed ID: 1964681
PubMed ID: 2551905
Title: The structure of tumor necrosis factor-alpha at 2.6-A resolution. Implications for receptor binding.
PubMed ID: 2551905
DOI: 10.2210/pdb1tnf/pdb
PubMed ID: 9488135
Title: Crystal structure of TNF-alpha mutant R31D with greater affinity for receptor R1 compared with R2.
PubMed ID: 9488135
PubMed ID: 9442056
Title: High resolution crystal structure of a human tumor necrosis factor-alpha mutant with low systemic toxicity.
PubMed ID: 9442056
Sequence Information:
- Length: 233
- Mass: 25644
- Checksum: 3DF90F96C9031FFE
- Sequence:
MSTESMIRDV ELAEEALPKK TGGPQGSRRC LFLSLFSFLI VAGATTLFCL LHFGVIGPQR EEFPRDLSLI SPLAQAVRSS SRTPSDKPVA HVVANPQAEG QLQWLNRRAN ALLANGVELR DNQLVVPSEG LYLIYSQVLF KGQGCPSTHV LLTHTISRIA VSYQTKVNLL SAIKSPCQRE TPEGAEAKPW YEPIYLGGVF QLEKGDRLSA EINRPDYLDF AESGQVYFGI IAL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.