Details for: XPA
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 265.5819
Cell Significance Index: -41.3100 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 140.3151
Cell Significance Index: -35.5900 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 89.1188
Cell Significance Index: -42.0800 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 82.7062
Cell Significance Index: -33.6000 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 76.4408
Cell Significance Index: -39.3200 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 62.9264
Cell Significance Index: -42.2300 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 35.3498
Cell Significance Index: -33.7500 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 34.0726
Cell Significance Index: -42.0100 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 12.4195
Cell Significance Index: -33.2700 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 10.6930
Cell Significance Index: -42.2000 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 9.4483
Cell Significance Index: -29.0200 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 7.6122
Cell Significance Index: -16.6600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.6415
Cell Significance Index: 1482.1800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.2860
Cell Significance Index: 139.8800 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.2315
Cell Significance Index: 247.0400 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 0.9367
Cell Significance Index: 7.2200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.7858
Cell Significance Index: 100.7400 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.7853
Cell Significance Index: 96.5600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.7584
Cell Significance Index: 272.0300 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.7509
Cell Significance Index: 135.3700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.7245
Cell Significance Index: 44.5300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.6926
Cell Significance Index: 137.4400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.6573
Cell Significance Index: 90.2600 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.5486
Cell Significance Index: 242.5600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.5207
Cell Significance Index: 27.3400 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.4824
Cell Significance Index: 47.7200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.4555
Cell Significance Index: 28.7100 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.4522
Cell Significance Index: 31.9800 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.4487
Cell Significance Index: 245.0400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.4300
Cell Significance Index: 20.0500 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.3971
Cell Significance Index: 7.7500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.3903
Cell Significance Index: 29.9500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.3561
Cell Significance Index: 16.1400 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3393
Cell Significance Index: 7.3500 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 0.3020
Cell Significance Index: 3.6000 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.2716
Cell Significance Index: 187.8300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.2171
Cell Significance Index: 6.2600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1922
Cell Significance Index: 8.5000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.1752
Cell Significance Index: 9.8300 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.1743
Cell Significance Index: 20.5600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.1579
Cell Significance Index: 5.9800 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.1541
Cell Significance Index: 8.0100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1040
Cell Significance Index: 19.7900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0983
Cell Significance Index: 16.7800 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.0938
Cell Significance Index: 2.2500 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0884
Cell Significance Index: 64.8400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0851
Cell Significance Index: 131.0800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0677
Cell Significance Index: 1.7400 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.0637
Cell Significance Index: 0.7900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0513
Cell Significance Index: 69.7800 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0461
Cell Significance Index: 0.7900 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0456
Cell Significance Index: 85.9000 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0434
Cell Significance Index: 79.9700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0380
Cell Significance Index: 24.1200 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0376
Cell Significance Index: 1.3200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0111
Cell Significance Index: 5.0500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.0155
Cell Significance Index: -0.5400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0197
Cell Significance Index: -14.5600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0285
Cell Significance Index: -17.7700 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0327
Cell Significance Index: -24.7600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0338
Cell Significance Index: -0.7200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0480
Cell Significance Index: -27.0600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0490
Cell Significance Index: -5.0100 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0495
Cell Significance Index: -6.4000 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0573
Cell Significance Index: -1.5600 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0620
Cell Significance Index: -4.1700 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0899
Cell Significance Index: -1.5100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0962
Cell Significance Index: -4.5200 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1016
Cell Significance Index: -21.4000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.1041
Cell Significance Index: -2.9100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1167
Cell Significance Index: -33.5700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1197
Cell Significance Index: -13.7100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1214
Cell Significance Index: -14.1500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1297
Cell Significance Index: -18.8600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1327
Cell Significance Index: -9.8900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1750
Cell Significance Index: -11.2900 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1820
Cell Significance Index: -9.4800 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.2005
Cell Significance Index: -4.1600 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2133
Cell Significance Index: -5.6100 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2155
Cell Significance Index: -17.0700 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.3234
Cell Significance Index: -6.7700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.3269
Cell Significance Index: -10.4700 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.3443
Cell Significance Index: -9.2100 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3619
Cell Significance Index: -37.6800 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3705
Cell Significance Index: -42.2900 - Cell Name: peg cell (CL4033014)
Fold Change: -0.3952
Cell Significance Index: -9.1300 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.4239
Cell Significance Index: -11.3200 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.4654
Cell Significance Index: -11.8900 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.4727
Cell Significance Index: -6.4500 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.4769
Cell Significance Index: -7.0400 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.5657
Cell Significance Index: -28.5900 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.5728
Cell Significance Index: -35.1200 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6074
Cell Significance Index: -17.8400 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.6217
Cell Significance Index: -5.0700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.6554
Cell Significance Index: -13.9100 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.6757
Cell Significance Index: -7.0000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.7300
Cell Significance Index: -23.2500 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.7615
Cell Significance Index: -24.9300 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.7883
Cell Significance Index: -17.2600 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.8135
Cell Significance Index: -23.3200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2791788058
Symbol: XPA_HUMAN
Name: DNA repair protein complementing XP-A cells
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2234061
Title: Analysis of a human DNA excision repair gene involved in group A Xeroderma pigmentosum and containing a zinc-finger domain.
PubMed ID: 2234061
DOI: 10.1038/348073a0
PubMed ID: 15164053
Title: DNA sequence and analysis of human chromosome 9.
PubMed ID: 15164053
DOI: 10.1038/nature02465
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8294029
Title: Genomic characterization of the human DNA excision repair-controlling gene XPAC.
PubMed ID: 8294029
PubMed ID: 7700386
Title: RPA involvement in the damage-recognition and incision steps of nucleotide excision repair.
PubMed ID: 7700386
DOI: 10.1038/374566a0
PubMed ID: 8543191
Title: Characterization of the human XPA promoter.
PubMed ID: 8543191
PubMed ID: 1918083
Title: Identification and characterization of xpac protein, the gene product of the human XPAC (Xeroderma pigmentosum group A complementing) gene.
PubMed ID: 1918083
PubMed ID: 1601884
Title: Mutational analysis of the structure and function of the Xeroderma pigmentosum group A complementing protein. Identification of essential domains for nuclear localization and DNA excision repair.
PubMed ID: 1601884
PubMed ID: 8504220
Title: Molecular analysis of Xeroderma pigmentosum group A gene.
PubMed ID: 8504220
DOI: 10.1007/bf01891230
PubMed ID: 10447254
Title: A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy.
PubMed ID: 10447254
DOI: 10.1002/(sici)1098-1004(1999)14:1<9::aid-humu2>3.0.co;2-6
PubMed ID: 16540648
Title: Phosphorylation of nucleotide excision repair factor xeroderma pigmentosum group A by ataxia telangiectasia mutated and Rad3-related-dependent checkpoint pathway promotes cell survival in response to UV irradiation.
PubMed ID: 16540648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19197159
Title: UV-dependent interaction between Cep164 and XPA mediates localization of Cep164 at sites of DNA damage and UV sensitivity.
PubMed ID: 19197159
DOI: 10.4161/cc.8.4.7844
PubMed ID: 20304803
Title: Circadian control of XPA and excision repair of cisplatin-DNA damage by cryptochrome and HERC2 ubiquitin ligase.
PubMed ID: 20304803
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 25218447
Title: Uncovering global SUMOylation signaling networks in a site-specific manner.
PubMed ID: 25218447
DOI: 10.1038/nsmb.2890
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 9699634
Title: Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA.
PubMed ID: 9699634
DOI: 10.1038/1400
PubMed ID: 10563794
Title: Interactions of human nucleotide excision repair protein XPA with DNA and RPA70 Delta C327: chemical shift mapping and 15N NMR relaxation studies.
PubMed ID: 10563794
DOI: 10.1021/bi991755p
PubMed ID: 31253769
Title: Structural basis of TFIIH activation for nucleotide excision repair.
PubMed ID: 31253769
PubMed ID: 1339397
Title: Molecular basis of group A Xeroderma pigmentosum: a missense mutation and two deletions located in a zinc finger consensus sequence of the XPAC gene.
PubMed ID: 1339397
DOI: 10.1007/bf02265282
PubMed ID: 1372103
Title: Identification of splicing mutations of the last nucleotides of exons, a nonsense mutation, and a missense mutation of the XPAC gene as causes of group A Xeroderma pigmentosum.
PubMed ID: 1372103
PubMed ID: 9671271
Title: Distribution of mutations in the human Xeroderma pigmentosum group A gene and their relationships to the functional regions of the DNA damage recognition protein.
PubMed ID: 9671271
DOI: 10.1002/(sici)1098-1004(1998)12:2<103::aid-humu5>3.0.co;2-6
Sequence Information:
- Length: 273
- Mass: 31368
- Checksum: F89F735219A8494B
- Sequence:
MAAADGALPE AAALEQPAEL PASVRASIER KRQRALMLRQ ARLAARPYSA TAAAATGGMA NVKAAPKIID TGGGFILEEE EEEEQKIGKV VHQPGPVMEF DYVICEECGK EFMDSYLMNH FDLPTCDNCR DADDKHKLIT KTEAKQEYLL KDCDLEKREP PLKFIVKKNP HHSQWGDMKL YLKLQIVKRS LEVWGSQEAL EEAKEVRQEN REKMKQKKFD KKVKELRRAV RSSVWKRETI VHQHEYGPEE NLEDDMYRKT CTMCGHELTY EKM
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.