Details for: IVD

Gene ID: 3712

Symbol: IVD

Ensembl ID: ENSG00000128928

Description: isovaleryl-CoA dehydrogenase

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: pulmonary interstitial fibroblast (CL0002241)
    Fold Change: 2.42
    Marker Score: 1937
  • Cell Name: Leydig cell (CL0000178)
    Fold Change: 1.39
    Marker Score: 1494.5
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 1.31
    Marker Score: 23281
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 1.31
    Marker Score: 48169
  • Cell Name: proerythroblast (CL0000547)
    Fold Change: 1.3
    Marker Score: 882
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 1.23
    Marker Score: 11553
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 1.22
    Marker Score: 24211
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 1.21
    Marker Score: 597
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 1.19
    Marker Score: 45148
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.16
    Marker Score: 71463
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 1.16
    Marker Score: 24798
  • Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
    Fold Change: 1.16
    Marker Score: 3109.5
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 1.15
    Marker Score: 11891.5
  • Cell Name: kidney collecting duct principal cell (CL1001431)
    Fold Change: 1.13
    Marker Score: 2852
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: 1.13
    Marker Score: 1743
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 1.13
    Marker Score: 11321
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 1.12
    Marker Score: 4656
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: 1.12
    Marker Score: 10643.5
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 1.12
    Marker Score: 3040
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: 1.1
    Marker Score: 1008
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 1.05
    Marker Score: 1541.5
  • Cell Name: type II pneumocyte (CL0002063)
    Fold Change: 1.03
    Marker Score: 6687
  • Cell Name: acinar cell (CL0000622)
    Fold Change: 1.02
    Marker Score: 719
  • Cell Name: Unknown (CL0002371)
    Fold Change: 1.02
    Marker Score: 1082.5
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 1.01
    Marker Score: 4231
  • Cell Name: kidney collecting duct intercalated cell (CL1001432)
    Fold Change: 1.01
    Marker Score: 1678
  • Cell Name: epithelial cell of proximal tubule (CL0002306)
    Fold Change: 1.01
    Marker Score: 3593
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 1
    Marker Score: 3860
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71678
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 0.99
    Marker Score: 47902
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.99
    Marker Score: 15499.5
  • Cell Name: stem cell (CL0000034)
    Fold Change: 0.99
    Marker Score: 2349
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30388
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: 0.98
    Marker Score: 8389
  • Cell Name: CD34-positive, CD38-negative hematopoietic stem cell (CL0001024)
    Fold Change: 0.97
    Marker Score: 705
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 0.97
    Marker Score: 2276
  • Cell Name: erythroid progenitor cell, mammalian (CL0001066)
    Fold Change: 0.96
    Marker Score: 309
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: 0.96
    Marker Score: 641
  • Cell Name: luminal cell of prostate epithelium (CL0002340)
    Fold Change: 0.95
    Marker Score: 555.5
  • Cell Name: midzonal region hepatocyte (CL0019028)
    Fold Change: 0.95
    Marker Score: 4115
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.95
    Marker Score: 2161
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 0.95
    Marker Score: 521
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.94
    Marker Score: 2394
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.93
    Marker Score: 479
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.92
    Marker Score: 436
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: 0.92
    Marker Score: 5931.5
  • Cell Name: neuron (CL0000540)
    Fold Change: 0.92
    Marker Score: 3750
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: 0.92
    Marker Score: 953
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.91
    Marker Score: 5217
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 0.9
    Marker Score: 2698
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.87
    Marker Score: 5294
  • Cell Name: pneumocyte (CL0000322)
    Fold Change: 0.86
    Marker Score: 1377
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.85
    Marker Score: 307
  • Cell Name: P/D1 enteroendocrine cell (CL0002268)
    Fold Change: 0.85
    Marker Score: 318
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.85
    Marker Score: 1382
  • Cell Name: central nervous system macrophage (CL0000878)
    Fold Change: 0.85
    Marker Score: 423
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 0.85
    Marker Score: 5035.5
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.85
    Marker Score: 1027
  • Cell Name: hematopoietic precursor cell (CL0008001)
    Fold Change: 0.85
    Marker Score: 297
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 0.85
    Marker Score: 732
  • Cell Name: basal cell of epithelium of trachea (CL1000348)
    Fold Change: 0.85
    Marker Score: 6298.5
  • Cell Name: ependymal cell (CL0000065)
    Fold Change: 0.85
    Marker Score: 295
  • Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
    Fold Change: 0.84
    Marker Score: 889
  • Cell Name: cholangiocyte (CL1000488)
    Fold Change: 0.84
    Marker Score: 313
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: 0.83
    Marker Score: 482
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 0.83
    Marker Score: 2843
  • Cell Name: mucous neck cell (CL0000651)
    Fold Change: 0.82
    Marker Score: 1866
  • Cell Name: common lymphoid progenitor (CL0000051)
    Fold Change: 0.81
    Marker Score: 555
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.81
    Marker Score: 9165
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.81
    Marker Score: 1092.5
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 0.81
    Marker Score: 869
  • Cell Name: periportal region hepatocyte (CL0019026)
    Fold Change: 0.81
    Marker Score: 4333
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.8
    Marker Score: 469
  • Cell Name: duct epithelial cell (CL0000068)
    Fold Change: 0.8
    Marker Score: 373.5
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.8
    Marker Score: 319
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 0.79
    Marker Score: 540
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 0.79
    Marker Score: 3237
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.79
    Marker Score: 12611
  • Cell Name: granulocyte monocyte progenitor cell (CL0000557)
    Fold Change: 0.78
    Marker Score: 497
  • Cell Name: epithelial cell of lung (CL0000082)
    Fold Change: 0.78
    Marker Score: 4112
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.78
    Marker Score: 593
  • Cell Name: kidney connecting tubule epithelial cell (CL1000768)
    Fold Change: 0.77
    Marker Score: 1090
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 0.77
    Marker Score: 404
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 0.77
    Marker Score: 11446
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: 0.76
    Marker Score: 4871
  • Cell Name: intestinal crypt stem cell of large intestine (CL0009016)
    Fold Change: 0.76
    Marker Score: 229
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.76
    Marker Score: 7677
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 0.76
    Marker Score: 4924
  • Cell Name: adventitial cell (CL0002503)
    Fold Change: 0.75
    Marker Score: 186
  • Cell Name: endocrine cell (CL0000163)
    Fold Change: 0.75
    Marker Score: 389
  • Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
    Fold Change: 0.75
    Marker Score: 756
  • Cell Name: peptic cell (CL0000155)
    Fold Change: 0.74
    Marker Score: 311
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 0.74
    Marker Score: 643
  • Cell Name: respiratory goblet cell (CL0002370)
    Fold Change: 0.74
    Marker Score: 214
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: 0.74
    Marker Score: 1174
  • Cell Name: fraction A pre-pro B cell (CL0002045)
    Fold Change: 0.73
    Marker Score: 740
  • Cell Name: common myeloid progenitor (CL0000049)
    Fold Change: 0.73
    Marker Score: 193
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.73
    Marker Score: 724
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.72
    Marker Score: 374
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 0.72
    Marker Score: 761

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Other Information

**Key characteristics:** * IVD is a multifunctional enzyme that is involved in multiple pathways. * It is significantly expressed in cells such as pulmonary interstitial fibroblast, Leydig cell, cortical cell of adrenal gland, pvalb GABAergic cortical interneuron, proerythroblast, near-projecting glutamatergic cortical neuron, sst GABAergic cortical interneuron, leptomeningeal cell, and vip GABAergic cortical interneuron. * IVD is a key enzyme in the metabolism of branched-chain amino acids. **Pathways and functions:** * IVD is involved in the following pathways: * Branched-chain amino acid catabolic process * Branched-chain amino acid catabolism * Butyryl-CoA dehydrogenase activity * Fatty acid beta-oxidation using acyl-CoA dehydrogenase * Flavin adenine dinucleotide binding * Identical protein binding * Isovaleryl-coa dehydrogenase activity * Leucine catabolic process **Clinical significance:** * Mutations in the IVD gene have been linked to several human diseases, including valproic acid-induced hepatotoxicity. * IVD inhibitors are being investigated as potential treatments for these diseases. **Additional notes:** * IVD is a highly conserved enzyme, with a similar sequence found in organisms from yeast to humans. * IVD is a regulated gene, with its expression being controlled by a variety of factors, including the levels of amino acids and other metabolites.

Genular Protein ID: 4110251337

Symbol: IVD_HUMAN

Name: Butyryl-CoA dehydrogenase

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 2318964

Title: Nucleotide sequence of messenger RNA encoding human isovaleryl-coenzyme A dehydrogenase and its expression in isovaleric acidemia fibroblasts.

PubMed ID: 2318964

DOI: 10.1172/jci114536

PubMed ID: 10677295

Title: Exon skipping in IVD RNA processing in isovaleric acidemia caused by point mutations in the coding region of the IVD gene.

PubMed ID: 10677295

DOI: 10.1086/302751

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16572171

Title: Analysis of the DNA sequence and duplication history of human chromosome 15.

PubMed ID: 16572171

DOI: 10.1038/nature04601

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8468053

Title: Structural organization of the human isovaleryl-CoA dehydrogenase gene.

PubMed ID: 8468053

DOI: 10.1006/geno.1993.1111

PubMed ID: 1310317

Title: The variant human isovaleryl-CoA dehydrogenase gene responsible for type II isovaleric acidemia determines an RNA splicing error, leading to the deletion of the entire second coding exon and the production of a truncated precursor protein that interacts poorly with mitochondrial import receptors.

PubMed ID: 1310317

DOI: 10.1016/s0021-9258(18)45906-6

PubMed ID: 12665801

Title: Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.

PubMed ID: 12665801

DOI: 10.1038/nbt810

PubMed ID: 7640268

Title: Identification of the active site catalytic residue in human isovaleryl-CoA dehydrogenase.

PubMed ID: 7640268

DOI: 10.1021/bi00032a007

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 9214289

Title: Structure of human isovaleryl-CoA dehydrogenase at 2.6-A resolution: structural basis for substrate specificity.

PubMed ID: 9214289

DOI: 10.1021/bi970422u

PubMed ID: 2063866

Title: Molecular characterization of four different classes of mutations in the isovaleryl-CoA dehydrogenase gene responsible for isovaleric acidemia.

PubMed ID: 2063866

PubMed ID: 9665741

Title: Characterization of molecular defects in isovaleryl-CoA dehydrogenase in patients with isovaleric acidemia.

PubMed ID: 9665741

DOI: 10.1021/bi973096r

PubMed ID: 22004070

Title: Phenotypic and mutation spectrums of Thai patients with isovaleric acidemia.

PubMed ID: 22004070

DOI: 10.1111/j.1442-200x.2011.03488.x

PubMed ID: 22350545

Title: Clinical variability of isovaleric acidemia in a genetically homogeneous population.

PubMed ID: 22350545

DOI: 10.1007/s10545-012-9457-2

PubMed ID: 23587913

Title: Two novel isovaleryl-CoA dehydrogenase gene mutations in a Chinese infant.

PubMed ID: 23587913

DOI: 10.1016/j.gene.2013.03.139

PubMed ID: 28535199

Title: Genotype-phenotype correlation in patients with isovaleric acidaemia: comparative structural modelling and computational analysis of novel variants.

PubMed ID: 28535199

DOI: 10.1093/hmg/ddx195

Sequence Information:

  • Length: 426
  • Mass: 46651
  • Checksum: D744DA85752BF307
  • Sequence:
  • MAEMATATRL LGWRVASWRL RPPLAGFVSQ RAHSLLPVDD AINGLSEEQR QLRQTMAKFL 
    QEHLAPKAQE IDRSNEFKNL REFWKQLGNL GVLGITAPVQ YGGSGLGYLE HVLVMEEISR 
    ASGAVGLSYG AHSNLCINQL VRNGNEAQKE KYLPKLISGE YIGALAMSEP NAGSDVVSMK 
    LKAEKKGNHY ILNGNKFWIT NGPDADVLIV YAKTDLAAVP ASRGITAFIV EKGMPGFSTS 
    KKLDKLGMRG SNTCELIFED CKIPAANILG HENKGVYVLM SGLDLERLVL AGGPLGLMQA 
    VLDHTIPYLH VREAFGQKIG HFQLMQGKMA DMYTRLMACR QYVYNVAKAC DEGHCTAKDC 
    AGVILYSAEC ATQVALDGIQ CFGGNGYIND FPMGRFLRDA KLYEIGAGTS EVRRLVIGRA 
    FNADFH

Genular Protein ID: 329058693

Symbol: A0A0A0MT83_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 16572171

Title: Analysis of the DNA sequence and duplication history of human chromosome 15.

PubMed ID: 16572171

DOI: 10.1038/nature04601

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

PubMed ID: 26871637

Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

PubMed ID: 26871637

DOI: 10.1016/j.cell.2016.01.029

Sequence Information:

  • Length: 423
  • Mass: 46319
  • Checksum: 121AF14C7F1FA13D
  • Sequence:
  • MATATRLLGW RVASWRLRPP LAGFVSQRAH SLLPVDDAIN GLSEEQRQLR QTMAKFLQEH 
    LAPKAQEIDR SNEFKNLREF WKQLGNLGVL GITAPVQYGG SGLGYLEHVL VMEEISRASG 
    AVGLSYGAHS NLCINQLVRN GNEAQKEKYL PKLISGEYIG ALAMSEPNAG SDVVSMKLKA 
    EKKGNHYILN GNKFWITNGP DADVLIVYAK TDLAAVPASR GITAFIVEKG MPGFSTSKKL 
    DKLGMRGSNT CELIFEDCKI PAANILGHEN KGVYVLMSGL DLERLVLAGG PLGLMQAVLD 
    HTIPYLHVRE AFGQKIGHFQ LMQGKMADMY TRLMACRQYV YNVAKACDEG HCTAKDCAGV 
    ILYSAECATQ VALDGIQCFG GNGYINDFPM GRFLRDAKLY EIGAGTSEVR RLVIGRAFNA 
    DFH

Genular Protein ID: 4161770915

Symbol: A0A0S2Z4K7_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 16572171

Title: Analysis of the DNA sequence and duplication history of human chromosome 15.

PubMed ID: 16572171

DOI: 10.1038/nature04601

PubMed ID: 26871637

Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

PubMed ID: 26871637

DOI: 10.1016/j.cell.2016.01.029

Sequence Information:

  • Length: 393
  • Mass: 42724
  • Checksum: 6C75C436286F2617
  • Sequence:
  • MATATRLLGW RVASWRLRPP LAGFVSQRAH SLLPVDDAIN GLSEEQRQEF WKQLGNLGVL 
    GITAPVQYGG SGLGYLEHVL VMEEISRASG AVGLSYGAHS NLCINQLVRN GNEAQKEKYL 
    PKLISGEYIG ALAMSEPNAG SDVVSMKLKA EKKGNHYILN GNKFWITNGP DADVLIVYAK 
    TDLAAVPASR GITAFIVEKG MPGFSTSKKL DKLGMRGSNT CELIFEDCKI PAANILGHEN 
    KGVYVLMSGL DLERLVLAGG PLGLMQAVLD HTIPYLHVRE AFGQKIGHFQ LMQGKMADMY 
    TRLMACRQYV YNVAKACDEG HCTAKDCAGV ILYSAECATQ VALDGIQCFG GNGYINDFPM 
    GRFLRDAKLY EIGAGTSEVR RLVIGRAFNA DFH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.