Details for: MSH3
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 280.8186
Cell Significance Index: -43.6800 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 170.0025
Cell Significance Index: -43.1200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 92.0353
Cell Significance Index: -37.3900 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 85.1599
Cell Significance Index: -43.8100 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 39.3195
Cell Significance Index: -37.5400 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 36.6518
Cell Significance Index: -45.1900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 14.2785
Cell Significance Index: -38.2500 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 12.5706
Cell Significance Index: -38.6100 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 11.5191
Cell Significance Index: -45.4600 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 9.4764
Cell Significance Index: -20.7400 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 2.3162
Cell Significance Index: 102.4500 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 2.1464
Cell Significance Index: 81.2800 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.1420
Cell Significance Index: 429.6900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.8099
Cell Significance Index: 359.1800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 1.6770
Cell Significance Index: 22.8800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.4473
Cell Significance Index: 519.1300 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.3747
Cell Significance Index: 77.1400 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.2796
Cell Significance Index: 58.0000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.2674
Cell Significance Index: 35.4200 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 1.2333
Cell Significance Index: 35.5400 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 1.1909
Cell Significance Index: 29.7700 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.0814
Cell Significance Index: 117.6200 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 1.0706
Cell Significance Index: 740.4400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.8156
Cell Significance Index: 54.8400 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.8060
Cell Significance Index: 15.7300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.6971
Cell Significance Index: 42.8500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.6950
Cell Significance Index: 53.3300 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.6543
Cell Significance Index: 117.9500 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.5900
Cell Significance Index: 72.5400 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.5724
Cell Significance Index: 12.4000 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.4901
Cell Significance Index: 25.4600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.4093
Cell Significance Index: 369.6000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.3956
Cell Significance Index: 216.0400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.3616
Cell Significance Index: 10.3200 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.3286
Cell Significance Index: 7.8800 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.2817
Cell Significance Index: 27.8700 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.2540
Cell Significance Index: 6.5300 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.2214
Cell Significance Index: 7.7800 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.1770
Cell Significance Index: 24.3100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1709
Cell Significance Index: 321.8000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.1452
Cell Significance Index: 92.2400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1310
Cell Significance Index: 6.1100 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.1292
Cell Significance Index: 1.1900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1240
Cell Significance Index: 54.8300 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.1215
Cell Significance Index: 187.0400 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.1179
Cell Significance Index: 2.0200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.1059
Cell Significance Index: 48.0500 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0989
Cell Significance Index: 18.8200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0979
Cell Significance Index: 180.6100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.0568
Cell Significance Index: 9.2400 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0354
Cell Significance Index: 4.5400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0250
Cell Significance Index: 34.0500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0135
Cell Significance Index: 2.3100 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 0.0107
Cell Significance Index: 0.1600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0052
Cell Significance Index: 0.1100 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0030
Cell Significance Index: -0.0800 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.0098
Cell Significance Index: -0.1700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0111
Cell Significance Index: -0.7000 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0265
Cell Significance Index: -3.1200 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0285
Cell Significance Index: -20.9000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0316
Cell Significance Index: -23.4200 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0353
Cell Significance Index: -22.0600 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0386
Cell Significance Index: -1.0400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0532
Cell Significance Index: -40.3000 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0636
Cell Significance Index: -35.8900 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0700
Cell Significance Index: -3.2900 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.1132
Cell Significance Index: -1.3500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1225
Cell Significance Index: -25.8000 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1336
Cell Significance Index: -8.6200 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1379
Cell Significance Index: -39.6800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1482
Cell Significance Index: -21.5500 - Cell Name: adipocyte of breast (CL0002617)
Fold Change: -0.1485
Cell Significance Index: -1.8700 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1578
Cell Significance Index: -16.1200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1786
Cell Significance Index: -3.9100 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1912
Cell Significance Index: -9.9600 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: -0.2020
Cell Significance Index: -2.5100 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.2091
Cell Significance Index: -14.7900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.2259
Cell Significance Index: -29.1900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2332
Cell Significance Index: -26.7200 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2400
Cell Significance Index: -27.9700 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3094
Cell Significance Index: -35.3200 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3369
Cell Significance Index: -35.0800 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: -0.3461
Cell Significance Index: -4.9700 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.4351
Cell Significance Index: -32.4300 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.4381
Cell Significance Index: -9.3700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.4561
Cell Significance Index: -9.6800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.4565
Cell Significance Index: -23.9700 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.4712
Cell Significance Index: -37.3200 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.4746
Cell Significance Index: -15.2000 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.4852
Cell Significance Index: -29.7500 - Cell Name: peg cell (CL4033014)
Fold Change: -0.5272
Cell Significance Index: -12.1800 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.5384
Cell Significance Index: -14.6600 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.5583
Cell Significance Index: -8.2400 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.6270
Cell Significance Index: -19.9700 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.6285
Cell Significance Index: -9.0000 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6502
Cell Significance Index: -19.1500 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.6591
Cell Significance Index: -21.5800 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.6635
Cell Significance Index: -13.1200 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.7024
Cell Significance Index: -14.5700 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.7402
Cell Significance Index: -25.7200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1306523436
Symbol: MSH3_HUMAN
Name: DNA mismatch repair protein Msh3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2722860
Title: Isolation and characterization of cDNA clones derived from the divergently transcribed gene in the region upstream from the human dihydrofolate reductase gene.
PubMed ID: 2722860
PubMed ID: 8942985
Title: hMSH2 forms specific mispair-binding complexes with hMSH3 and hMSH6.
PubMed ID: 8942985
PubMed ID: 15372022
Title: The DNA sequence and comparative analysis of human chromosome 5.
PubMed ID: 15372022
DOI: 10.1038/nature02919
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8782829
Title: Mutation of MSH3 in endometrial cancer and evidence for its functional role in heteroduplex repair.
PubMed ID: 8782829
DOI: 10.1038/ng0996-102
PubMed ID: 11427529
Title: The interaction of DNA mismatch repair proteins with human exonuclease I.
PubMed ID: 11427529
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 26300262
Title: MCM9 Is Required for Mammalian DNA Mismatch Repair.
PubMed ID: 26300262
PubMed ID: 8851770
Title: Nine-bp repeat polymorphism in exon 1 of the hMSH3 gene.
PubMed ID: 8851770
DOI: 10.1007/bf01900603
PubMed ID: 10944853
Title: Association between single nucleotide polymorphisms in the hMSH3 gene and sporadic colon cancer with microsatellite instability.
PubMed ID: 10944853
PubMed ID: 27476653
Title: Exome Sequencing Identifies Biallelic MSH3 Germline Mutations as a Recessive Subtype of Colorectal Adenomatous Polyposis.
PubMed ID: 27476653
Sequence Information:
- Length: 1137
- Mass: 127412
- Checksum: FBAE6B84D3F86032
- Sequence:
MSRRKPASGG LAASSSAPAR QAVLSRFFQS TGSLKSTSSS TGAADQVDPG AAAAAAAAAA AAPPAPPAPA FPPQLPPHIA TEIDRRKKRP LENDGPVKKK VKKVQQKEGG SDLGMSGNSE PKKCLRTRNV SKSLEKLKEF CCDSALPQSR VQTESLQERF AVLPKCTDFD DISLLHAKNA VSSEDSKRQI NQKDTTLFDL SQFGSSNTSH ENLQKTASKS ANKRSKSIYT PLELQYIEMK QQHKDAVLCV ECGYKYRFFG EDAEIAAREL NIYCHLDHNF MTASIPTHRL FVHVRRLVAK GYKVGVVKQT ETAALKAIGD NRSSLFSRKL TALYTKSTLI GEDVNPLIKL DDAVNVDEIM TDTSTSYLLC ISENKENVRD KKKGNIFIGI VGVQPATGEV VFDSFQDSAS RSELETRMSS LQPVELLLPS ALSEQTEALI HRATSVSVQD DRIRVERMDN IYFEYSHAFQ AVTEFYAKDT VDIKGSQIIS GIVNLEKPVI CSLAAIIKYL KEFNLEKMLS KPENFKQLSS KMEFMTINGT TLRNLEILQN QTDMKTKGSL LWVLDHTKTS FGRRKLKKWV TQPLLKLREI NARLDAVSEV LHSESSVFGQ IENHLRKLPD IERGLCSIYH KKCSTQEFFL IVKTLYHLKS EFQAIIPAVN SHIQSDLLRT VILEIPELLS PVEHYLKILN EQAAKVGDKT ELFKDLSDFP LIKKRKDEIQ GVIDEIRMHL QEIRKILKNP SAQYVTVSGQ EFMIEIKNSA VSCIPTDWVK VGSTKAVSRF HSPFIVENYR HLNQLREQLV LDCSAEWLDF LEKFSEHYHS LCKAVHHLAT VDCIFSLAKV AKQGDYCRPT VQEERKIVIK NGRHPVIDVL LGEQDQYVPN NTDLSEDSER VMIITGPNMG GKSSYIKQVA LITIMAQIGS YVPAEEATIG IVDGIFTRMG AADNIYKGQS TFMEELTDTA EIIRKATSQS LVILDELGRG TSTHDGIAIA YATLEYFIRD VKSLTLFVTH YPPVCELEKN YSHQVGNYHM GFLVSEDESK LDPGAAEQVP DFVTFLYQIT RGIAARSYGL NVAKLADVPG EILKKAAHKS KELEGLINTK RKRLKYFAKL WTMHNAQDLQ KWTEEFNMEE TQTSLLH
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.