Details for: TM7SF3

Gene ID: 51768

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: TM7SF3

Ensembl ID: ENSG00000064115

Description: transmembrane 7 superfamily member 3

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 20.52
    rCSI 49.87%
    PRS 41.96
  • multi-ciliated epithelial cell CL0005012
    CSI 17.46
    rCSI 17.43%
    PRS 54.82
  • L6b glutamatergic cortical neuron CL4023038
    CSI 12.12
    rCSI 37.87%
    PRS 44.98
  • goblet cell CL0000160
    CSI 11.97
    rCSI 11.31%
    PRS 61.18
  • common myeloid progenitor CL0000049
    CSI 10.38
    rCSI 8.39%
    PRS 63
  • pancreatic ductal cell CL0002079
    CSI 9.62
    rCSI 18.71%
    PRS 64.52
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 9.22
    rCSI 11.48%
    PRS 41.41
  • squamous epithelial cell CL0000076
    CSI 9.07
    rCSI 21.52%
    PRS 65.25
  • melanocyte CL0000148
    CSI 8.76
    rCSI 6.49%
    PRS 54.18
  • hematopoietic stem cell CL0000037
    CSI 8.3
    rCSI 5.52%
    PRS 64.66
  • duct epithelial cell CL0000068
    CSI 8.09
    rCSI 11.83%
    PRS 66.19
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 7.39
    rCSI 43.52%
    PRS 44.66
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 7.29
    rCSI 26.22%
    PRS 41.74
  • intrahepatic cholangiocyte CL0002538
    CSI 7.07
    rCSI 16.96%
    PRS 71.97
  • renal beta-intercalated cell CL0002201
    CSI 6.88
    rCSI 16.39%
    PRS 62.53
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 6.85
    rCSI 35.36%
    PRS 82.97
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 6.42
    rCSI 25%
    PRS 81.55
  • VIP GABAergic cortical interneuron CL4023016
    CSI 5.92
    rCSI 7.08%
    PRS 43.12
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.87
    rCSI 5.66%
    PRS 61.62
  • promyelocyte CL0000836
    CSI 5.79
    rCSI 8.35%
    PRS 71.1
  • pancreatic acinar cell CL0002064
    CSI 5.73
    rCSI 7.62%
    PRS 68.01
  • enteric smooth muscle cell CL0002504
    CSI 5.59
    rCSI 7.98%
    PRS 63.86
  • epithelial cell CL0000066
    CSI 5.26
    rCSI 8.08%
    PRS 57.49
  • lung macrophage CL1001603
    CSI 5.14
    rCSI 11.49%
    PRS 69.33
  • epithelial cell of lower respiratory tract CL0002632
    CSI 5.07
    rCSI 3.93%
    PRS 63.42
  • microcirculation associated smooth muscle cell CL0008035
    CSI 4.99
    rCSI 14.46%
    PRS 63
  • epithelial cell of proximal tubule CL0002306
    CSI 4.76
    rCSI 11.62%
    PRS 55.1
  • centrilobular region hepatocyte CL0019029
    CSI 4.75
    rCSI 12.4%
    PRS 65.27
  • M cell of gut CL0000682
    CSI 4.67
    rCSI 4.96%
    PRS 71.91
  • lung pericyte CL0009089
    CSI 4.66
    rCSI 12.3%
    PRS 70.37
  • inhibitory interneuron CL0000498
    CSI 4.58
    rCSI 10.56%
    PRS 50.67
  • GABAergic neuron CL0000617
    CSI 4.39
    rCSI 14.72%
    PRS 46.78
  • mesothelial cell CL0000077
    CSI 4.37
    rCSI 17.11%
    PRS 38.25
  • retinal rod cell CL0000604
    CSI 4.27
    rCSI 7.53%
    PRS 58.48
  • ionocyte CL0005006
    CSI 4.24
    rCSI 4.55%
    PRS 60.94
  • retinal cone cell CL0000573
    CSI 4.14
    rCSI 6.67%
    PRS 51.12
  • dendritic cell, human CL0001056
    CSI 4.12
    rCSI 6.33%
    PRS 70.56
  • bronchus fibroblast of lung CL2000093
    CSI 4.04
    rCSI 3.28%
    PRS 62.06
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 3.71
    rCSI 6.55%
    PRS 42.4
  • deuterosomal cell CL4033044
    CSI 3.65
    rCSI 12.33%
    PRS 65.51
  • group 3 innate lymphoid cell CL0001071
    CSI 3.65
    rCSI 2.74%
    PRS 67.05
  • regular ventricular cardiac myocyte CL0002131
    CSI 3.51
    rCSI 21.95%
    PRS 53.43
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 3.47
    rCSI 2.64%
    PRS 74.6
  • brush cell of tracheobronchial tree CL0002075
    CSI 3.42
    rCSI 10.15%
    PRS 71.54
  • hematopoietic precursor cell CL0008001
    CSI 3.34
    rCSI 3.43%
    PRS 77.93
  • pulmonary ionocyte CL0017000
    CSI 3.33
    rCSI 4.05%
    PRS 69.05
  • tracheobronchial serous cell CL0019001
    CSI 3.32
    rCSI 14.36%
    PRS 74.16
  • respiratory hillock cell CL4030023
    CSI 3.2
    rCSI 5.7%
    PRS 74.9
  • BEST4+ enteroycte CL4030026
    CSI 3.14
    rCSI 3.9%
    PRS 63.3
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI 3.1
    rCSI 3.05%
    PRS 77.2
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 3.09
    rCSI 3.97%
    PRS 58.71
  • double negative thymocyte CL0002489
    CSI 3.01
    rCSI 2.09%
    PRS 72.75
  • early lymphoid progenitor CL0000936
    CSI 2.98
    rCSI 2.62%
    PRS 67.1
  • secretory cell CL0000151
    CSI 2.98
    rCSI 3.11%
    PRS 61.8
  • retinal bipolar neuron CL0000748
    CSI 2.97
    rCSI 5.57%
    PRS 49.93
  • myofibroblast cell CL0000186
    CSI 2.91
    rCSI 4.03%
    PRS 62.65
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 2.91
    rCSI 7.51%
    PRS 56.57
  • Kupffer cell CL0000091
    CSI 2.87
    rCSI 6.57%
    PRS 61.44
  • neural crest cell CL0011012
    CSI 2.87
    rCSI 2.27%
    PRS 48.38
  • Mueller cell CL0000636
    CSI 2.86
    rCSI 6.52%
    PRS 53.39
  • unswitched memory B cell CL0000970
    CSI 2.82
    rCSI 2.38%
    PRS 78.51
  • interneuron CL0000099
    CSI 2.82
    rCSI 5.66%
    PRS 50.61
  • alternatively activated macrophage CL0000890
    CSI 2.79
    rCSI 3.51%
    PRS 73.42
  • mucous neck cell CL0000651
    CSI 2.76
    rCSI 3.97%
    PRS 72.32
  • intestinal epithelial cell CL0002563
    CSI 2.75
    rCSI 2.87%
    PRS 59.57
  • radial glial cell CL0000681
    CSI 2.67
    rCSI 3.71%
    PRS 60.2
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 2.65
    rCSI 1.57%
    PRS 78.88
  • ependymal cell CL0000065
    CSI 2.64
    rCSI 5.36%
    PRS 41
  • retinal ganglion cell CL0000740
    CSI 2.63
    rCSI 5.82%
    PRS 47.76
  • direct pathway medium spiny neuron CL4023026
    CSI 2.63
    rCSI 62.95%
    PRS 42.39
  • Schwann cell CL0002573
    CSI 2.6
    rCSI 7.4%
    PRS 59.7
  • ciliated cell CL0000064
    CSI 2.55
    rCSI 4.14%
    PRS 58.18
  • pulmonary artery endothelial cell CL1001568
    CSI 2.54
    rCSI 3.46%
    PRS 73.36
  • respiratory suprabasal cell CL4033048
    CSI 2.52
    rCSI 3.24%
    PRS 66.27
  • pro-B cell CL0000826
    CSI 2.48
    rCSI 2.06%
    PRS 63.77
  • neural progenitor cell CL0011020
    CSI 2.45
    rCSI 10.8%
    PRS 52.01
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 2.45
    rCSI 4.11%
    PRS 43.34
  • sncg GABAergic cortical interneuron CL4023015
    CSI 2.44
    rCSI 3.93%
    PRS 45.39
  • alveolar adventitial fibroblast CL4028006
    CSI 2.43
    rCSI 3.83%
    PRS 63.87
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 2.38
    rCSI 2.75%
    PRS 54.69
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.37
    rCSI 57.26%
    PRS 43.29
  • rod bipolar cell CL0000751
    CSI 2.36
    rCSI 4.24%
    PRS 54.64
  • astrocyte of the cerebral cortex CL0002605
    CSI 2.34
    rCSI 5.25%
    PRS 44.09
  • hepatic stellate cell CL0000632
    CSI 2.34
    rCSI 8.77%
    PRS 53.64
  • hepatocyte CL0000182
    CSI 2.33
    rCSI 4.18%
    PRS 60.69
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 2.33
    rCSI 1.79%
    PRS 62.04
  • glioblast CL0000030
    CSI 2.32
    rCSI 3.7%
    PRS 54.23
  • peripheral nervous system neuron CL2000032
    CSI 2.3
    rCSI 3.13%
    PRS 53.36
  • cholangiocyte CL1000488
    CSI 2.29
    rCSI 13.72%
    PRS 68.9
  • midzonal region hepatocyte CL0019028
    CSI 2.28
    rCSI 5.36%
    PRS 66.36
  • endocardial cell CL0002350
    CSI 2.28
    rCSI 10.91%
    PRS 60.27
  • myoepithelial cell CL0000185
    CSI 2.27
    rCSI 5.75%
    PRS 69.51
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 2.27
    rCSI 1.53%
    PRS 74.69
  • mature T cell CL0002419
    CSI 2.25
    rCSI 1.75%
    PRS 79.32
  • pancreatic A cell CL0000171
    CSI 2.21
    rCSI 2.32%
    PRS 65.21
  • lung ciliated cell CL1000271
    CSI 2.18
    rCSI 2.52%
    PRS 51.61
  • podocyte CL0000653
    CSI 2.18
    rCSI 9.67%
    PRS 61.06
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 2.17
    rCSI 1.96%
    PRS 58.43
  • intermediate monocyte CL0002393
    CSI 2.16
    rCSI 3.26%
    PRS 65.71
  • erythroblast CL0000765
    CSI 2.12
    rCSI 5.64%
    PRS 73.04
  • acinar cell of salivary gland CL0002623
    CSI 0.2
    rCSI 4.7%
    PRS 80.5%
  • ON midget ganglion cell CL4033046
    CSI 0.2
    rCSI 4.8%
    PRS 52.5%
  • lung goblet cell CL1000143
    CSI 0.3
    rCSI 3.2%
    PRS 82.0%
  • respiratory goblet cell CL0002370
    CSI 0.3
    rCSI 3.3%
    PRS 76.4%
  • erythroid progenitor cell CL0000038
    CSI 0.3
    rCSI 1.9%
    PRS 70.8%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 0.4
    rCSI 2.2%
    PRS 74.1%
  • eosinophil CL0000771
    CSI 0.5
    rCSI 3.3%
    PRS 87.1%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.5
    rCSI 2.0%
    PRS 44.1%
  • amacrine cell CL0000561
    CSI 0.6
    rCSI 1.6%
    PRS 51.3%
  • serous secreting cell of bronchus submucosal gland CL4033005
    CSI 0.6
    rCSI 3.4%
    PRS 81.0%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.7
    rCSI 2.2%
    PRS 47.5%
  • Hofbauer cell CL3000001
    CSI 0.8
    rCSI 1.5%
    PRS 72.0%
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 0.8
    rCSI 1.9%
    PRS 79.2%
  • glycinergic amacrine cell CL4030028
    CSI 0.8
    rCSI 2.1%
    PRS 59.1%
  • central nervous system neuron CL2000029
    CSI 0.8
    rCSI 5.9%
    PRS 48.4%
  • retina horizontal cell CL0000745
    CSI 0.8
    rCSI 1.2%
    PRS 57.8%
  • type B pancreatic cell CL0000169
    CSI 0.8
    rCSI 1.8%
    PRS 59.5%
  • S cone cell CL0003050
    CSI 0.9
    rCSI 3.7%
    PRS 58.1%
  • medium spiny neuron CL1001474
    CSI 0.9
    rCSI 7.9%
    PRS 49.0%
  • placental villous trophoblast CL2000060
    CSI 1.0
    rCSI 1.5%
    PRS 59.7%
  • parietal epithelial cell CL1000452
    CSI 1.0
    rCSI 2.7%
    PRS 52.6%
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 1.0
    rCSI 1.2%
    PRS 70.4%
  • Bergmann glial cell CL0000644
    CSI 1.0
    rCSI 1.4%
    PRS 55.1%
  • epithelial cell of proximal tubule segment 3 CL4030011
    CSI 1.1
    rCSI 8.6%
    PRS 70.2%
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 1.2
    rCSI 3.8%
    PRS 48.7%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.2
    rCSI 2.9%
    PRS 51.0%
  • cardiac muscle cell CL0000746
    CSI 1.2
    rCSI 1.7%
    PRS 51.3%
  • granulocyte monocyte progenitor cell CL0000557
    CSI 1.2
    rCSI 1.1%
    PRS 66.5%
  • colon epithelial cell CL0011108
    CSI 1.2
    rCSI 1.3%
    PRS 58.0%
  • thymocyte CL0000893
    CSI 1.3
    rCSI 4.5%
    PRS 90.3%
  • renal principal cell CL0005009
    CSI 1.3
    rCSI 3.3%
    PRS 65.1%
  • neuroendocrine cell CL0000165
    CSI 1.3
    rCSI 5.0%
    PRS 76.1%
  • respiratory basal cell CL0002633
    CSI 1.3
    rCSI 1.4%
    PRS 67.2%
  • renal interstitial pericyte CL1001318
    CSI 1.4
    rCSI 3.8%
    PRS 57.2%
  • CD14-positive monocyte CL0001054
    CSI 1.4
    rCSI 1.7%
    PRS 72.4%
  • acinar cell CL0000622
    CSI 1.4
    rCSI 2.1%
    PRS 73.1%
  • transit amplifying cell of colon CL0009011
    CSI 1.4
    rCSI 1.7%
    PRS 64.0%
  • fibroblast of cardiac tissue CL0002548
    CSI 1.5
    rCSI 6.9%
    PRS 61.7%
  • club cell CL0000158
    CSI 1.5
    rCSI 2.1%
    PRS 57.5%
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.5
    rCSI 1.9%
    PRS 44.6%
  • cerebral cortex neuron CL0010012
    CSI 1.5
    rCSI 6.0%
    PRS 56.1%
  • conjunctival epithelial cell CL1000432
    CSI 1.5
    rCSI 2.3%
    PRS 62.2%
  • retinal blood vessel endothelial cell CL0002585
    CSI 1.5
    rCSI 2.4%
    PRS 65.8%
  • granulocyte CL0000094
    CSI 1.5
    rCSI 2.3%
    PRS 70.9%
  • enteroendocrine cell CL0000164
    CSI 1.5
    rCSI 2.1%
    PRS 63.3%
  • basal cell CL0000646
    CSI 1.6
    rCSI 2.1%
    PRS 61.8%
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 1.6
    rCSI 3.9%
    PRS 48.9%
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 1.6
    rCSI 2.3%
    PRS 57.9%
  • mucus secreting cell CL0000319
    CSI 1.6
    rCSI 2.6%
    PRS 72.6%
  • cardiac neuron CL0010022
    CSI 1.7
    rCSI 5.3%
    PRS 58.8%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 1.7
    rCSI 3.9%
    PRS 58.0%
  • ciliated epithelial cell CL0000067
    CSI 1.7
    rCSI 1.5%
    PRS 49.4%
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 1.7
    rCSI 3.1%
    PRS 53.5%
  • retinal pigment epithelial cell CL0002586
    CSI 1.7
    rCSI 3.4%
    PRS 59.3%
  • mononuclear phagocyte CL0000113
    CSI 1.7
    rCSI 3.8%
    PRS 65.8%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 1.8
    rCSI 4.6%
    PRS 61.4%
  • lung neuroendocrine cell CL1000223
    CSI 1.8
    rCSI 2.6%
    PRS 66.9%
  • stem cell CL0000034
    CSI 1.8
    rCSI 1.7%
    PRS 52.2%
  • pulmonary alveolar type 2 cell CL0002063
    CSI 1.8
    rCSI 2.8%
    PRS 69.1%
  • neuron CL0000540
    CSI 1.9
    rCSI 4.9%
    PRS 50.9%
  • lung secretory cell CL1000272
    CSI 1.9
    rCSI 4.7%
    PRS 60.0%
  • choroid plexus epithelial cell CL0000706
    CSI 1.9
    rCSI 3.1%
    PRS 50.8%
  • cardiac endothelial cell CL0010008
    CSI 1.9
    rCSI 7.7%
    PRS 60.4%
  • periportal region hepatocyte CL0019026
    CSI 1.9
    rCSI 7.5%
    PRS 66.5%
  • inflammatory macrophage CL0000863
    CSI 1.9
    rCSI 3.3%
    PRS 84.1%
  • cerebral cortex endothelial cell CL1001602
    CSI 2.0
    rCSI 3.4%
    PRS 51.8%
  • keratinocyte CL0000312
    CSI 2.0
    rCSI 1.6%
    PRS 65.9%
  • plasmablast CL0000980
    CSI 2.0
    rCSI 1.6%
    PRS 68.3%
  • pancreatic D cell CL0000173
    CSI 2.0
    rCSI 2.0%
    PRS 64.2%
  • glial cell CL0000125
    CSI 2.0
    rCSI 7.7%
    PRS 52.5%
  • epithelial cell of lung CL0000082
    CSI 2.0
    rCSI 1.7%
    PRS 60.8%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 2.0
    rCSI 2.2%
    PRS 65.3%
  • plasmacytoid dendritic cell, human CL0001058
    CSI 2.1
    rCSI 1.5%
    PRS 64.4%
  • erythroblast CL0000765
    CSI 2.1
    rCSI 5.6%
    PRS 73.0%
  • intermediate monocyte CL0002393
    CSI 2.2
    rCSI 3.3%
    PRS 65.7%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 2.2
    rCSI 2.0%
    PRS 58.4%
  • podocyte CL0000653
    CSI 2.2
    rCSI 9.7%
    PRS 61.1%
  • lung ciliated cell CL1000271
    CSI 2.2
    rCSI 2.5%
    PRS 51.6%
  • pancreatic A cell CL0000171
    CSI 2.2
    rCSI 2.3%
    PRS 65.2%
  • mature T cell CL0002419
    CSI 2.3
    rCSI 1.8%
    PRS 79.3%
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 2.3
    rCSI 1.5%
    PRS 74.7%
  • myoepithelial cell CL0000185
    CSI 2.3
    rCSI 5.8%
    PRS 69.5%
  • endocardial cell CL0002350
    CSI 2.3
    rCSI 10.9%
    PRS 60.3%
  • midzonal region hepatocyte CL0019028
    CSI 2.3
    rCSI 5.4%
    PRS 66.4%
  • cholangiocyte CL1000488
    CSI 2.3
    rCSI 13.7%
    PRS 68.9%
  • peripheral nervous system neuron CL2000032
    CSI 2.3
    rCSI 3.1%
    PRS 53.4%
  • glioblast CL0000030
    CSI 2.3
    rCSI 3.7%
    PRS 54.2%
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 2.3
    rCSI 1.8%
    PRS 62.0%
  • hepatocyte CL0000182
    CSI 2.3
    rCSI 4.2%
    PRS 60.7%
  • hepatic stellate cell CL0000632
    CSI 2.3
    rCSI 8.8%
    PRS 53.6%
  • astrocyte of the cerebral cortex CL0002605
    CSI 2.3
    rCSI 5.3%
    PRS 44.1%
  • rod bipolar cell CL0000751
    CSI 2.4
    rCSI 4.2%
    PRS 54.6%
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.4
    rCSI 57.3%
    PRS 43.3%
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 2.4
    rCSI 2.8%
    PRS 54.7%
  • alveolar adventitial fibroblast CL4028006
    CSI 2.4
    rCSI 3.8%
    PRS 63.9%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 2.4
    rCSI 3.9%
    PRS 45.4%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 2.5
    rCSI 4.1%
    PRS 43.3%
  • neural progenitor cell CL0011020
    CSI 2.5
    rCSI 10.8%
    PRS 52.0%
  • pro-B cell CL0000826
    CSI 2.5
    rCSI 2.1%
    PRS 63.8%
  • respiratory suprabasal cell CL4033048
    CSI 2.5
    rCSI 3.2%
    PRS 66.3%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [TM7SF3](/details-gene/51768) (transmembrane 7 superfamily member 3) is a protein-coding gene located on chromosome 12p11.23. It encodes a putative seven-transmembrane receptor that functions as a homeostatic factor involved in attenuating cellular stress. Functional annotations and experimental evidence link [TM7SF3](/details-gene/51768) to the cellular response to unfolded protein, the negative regulation of programmed cell death, and the positive regulation of insulin secretion [Link](https://doi.org/10.1007/s00125-011-2277-3). **Overall**, expression data indicate its significance across a diverse range of cell types, including various neuronal populations, secretory epithelial cells, and hematopoietic progenitors, suggesting a broad role in maintaining cellular integrity in metabolically active or specialized cells. ## Cellular Roles and Expression Landscape The expression profile of [TM7SF3](/details-gene/51768) highlights its importance in functionally diverse cell populations, rather than being restricted to a single tissue or lineage. **Overall**, its highest significance is observed in the nervous system, particularly in [L2/3-6 intratelencephalic projecting glutamatergic neuron](/details-cell/CL4023040) (CSI: 20.52), [L6b glutamatergic cortical neuron](/details-cell/CL4023038) (CSI: 12.12), and [pvalb GABAergic cortical interneuron](/details-cell/CL4023018) (CSI: 9.22). This suggests a key role in maintaining homeostasis within specific cortical neuron subtypes. The gene is also a significant marker in multiple epithelial and secretory cell types. These include [multi-ciliated epithelial cell](/details-cell/CL0005012) (CSI: 17.46), [goblet cell](/details-cell/CL0000160) (CSI: 11.97), [pancreatic ductal cell](/details-cell/CL0002079) (CSI: 9.62), and [squamous epithelial cell](/details-cell/CL0000076) (CSI: 9.07). This pattern is consistent with a function in cells that are subject to high protein turnover and secretory stress. Furthermore, [TM7SF3](/details-gene/51768) shows notable significance in progenitor populations, including [common myeloid progenitor](/details-cell/CL0000049) (CSI: 10.38) and [hematopoietic stem cell](/details-cell/CL0000037) (CSI: 8.30), indicating a potential role in the maintenance and survival of these primitive cell types. ## Pathways and Molecular Function [TM7SF3](/details-gene/51768) is localized to the [plasma membrane](/details-cell/GO:0005886) and has been detected in the [extracellular exosome](/details-cell/GO:0070062), suggesting it may function in cell-cell communication or signaling. Its primary documented molecular roles center on cellular stress mitigation. The gene is involved in the [cellular response to unfolded protein](/details-cell/GO:0034620). Research has shown that [TM7SF3](/details-gene/51768) is a p53-regulated factor that can attenuate the unfolded protein response (UPR), thereby protecting cells from endoplasmic reticulum (ER) stress-induced apoptosis [Link](https://doi.org/10.1038/cdd.2016.108). This function is highly relevant to the diverse, highly active cell types where it is expressed, such as neurons and secretory cells. Consistent with its role in stress response, [TM7SF3](/details-gene/51768) is also implicated in the [negative regulation of programmed cell death](/details-cell/GO:0043069). An siRNA screen identified it as an inhibitor of cytokine-induced death in pancreatic beta cells [Link](https://doi.org/10.1007/s00125-011-2277-3). This finding aligns with its role in the [positive regulation of insulin secretion](/details-cell/GO:0032024), as beta cell survival is a prerequisite for proper insulin production and release. ## Research Directions The established function of [TM7SF3](/details-gene/51768) as a protective factor against cellular stress, particularly in pancreatic and neuronal contexts, suggests several avenues for further investigation. **Proposed Hypotheses:** 1. Given its high significance in multiple glutamatergic and GABAergic neuron subtypes and its established role in mitigating the UPR, dysregulation or genetic variation in [TM7SF3](/details-gene/51768) may contribute to the pathology of neurodegenerative diseases characterized by protein misfolding and ER stress, such as Alzheimer's or Parkinson's disease. 2. The significant expression of [TM7SF3](/details-gene/51768) in [hematopoietic stem cell](/details-cell/CL0000037) and [common myeloid progenitor](/details-cell/CL0000049), combined with its anti-apoptotic function, suggests that it is a critical survival factor during hematopoiesis. Its loss may impair the ability of stem cells to withstand the stresses of differentiation or environmental insults, leading to cytopenias. **Experimental Approach:** To test the hypothesis regarding its neuroprotective role (Hypothesis 1), one could employ a CRISPR-Cas9 knockout of [TM7SF3](/details-gene/51768) in human iPSC-derived cortical neurons. These modified neurons, alongside isogenic controls, could then be challenged with established ER stress-inducing agents (e.g., tunicamycin) or proteotoxic stressors (e.g., Aβ oligomers). The impact of [TM7SF3](/details-gene/51768) loss could be quantified by measuring UPR activation (via Western blot for CHOP and BiP), neuronal apoptosis (via TUNEL assay), and synaptic integrity (via immunofluorescence for synaptophysin). **Therapeutic Potential:** The function of [TM7SF3](/details-gene/51768) as a negative regulator of cell death suggests it is a compelling therapeutic target for *activation* or augmentation, rather than inhibition. For conditions characterized by pathological cell loss, such as type 1 diabetes (to protect remaining beta cells) or certain neurodegenerative disorders, developing small-molecule agonists or gene therapy vectors to enhance [TM7SF3](/details-gene/51768) expression or activity could represent a novel cytoprotective strategy. Its presence on the plasma membrane makes it potentially accessible to extracellular therapeutic agents.

Genular Protein ID: 2912745657

Symbol: TM7S3_HUMAN

Name: Transmembrane 7 superfamily member 3

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10828615

Title: Isolation and characterization of a novel gene encoding a putative seven-span transmembrane protein, TM7SF3.

PubMed ID: 10828615

DOI: 10.1159/000015514

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 21853325

Title: An siRNA screen identifies transmembrane 7 superfamily member 3 (TM7SF3), a seven transmembrane orphan receptor, as an inhibitor of cytokine-induced death of pancreatic beta cells.

PubMed ID: 21853325

DOI: 10.1007/s00125-011-2277-3

PubMed ID: 27740623

Title: TM7SF3, a novel p53-regulated homeostatic factor, attenuates cellular stress and the subsequent induction of the unfolded protein response.

PubMed ID: 27740623

DOI: 10.1038/cdd.2016.108

Sequence Information:

  • Length: 570
  • Mass: 64166
  • Checksum: CC296D7C22AD894C
  • Sequence:
  • MGFLQLLVVA VLASEHRVAG AAEVFGNSSE GLIEFSVGKF RYFELNRPFP EEAILHDISS 
    NVTFLIFQIH SQYQNTTVSF SPTLLSNSSE TGTASGLVFI LRPEQSTCTW YLGTSGIQPV 
    QNMAILLSYS ERDPVPGGCN LEFDLDIDPN IYLEYNFFET TIKFAPANLG YARGVDPPPC 
    DAGTDQDSRW RLQYDVYQYF LPENDLTEEM LLKHLQRMVS VPQVKASALK VVTLTANDKT 
    SVSFSSLPGQ GVIYNVIVWD PFLNTSAAYI PAHTYACSFE AGEGSCASLG RVSSKVFFTL 
    FALLGFFICF FGHRFWKTEL FFIGFIIMGF FFYILITRLT PIKYDVNLIL TAVTGSVGGM 
    FLVAVWWRFG ILSICMLCVG LVLGFLISSV TFFTPLGNLK IFHDDGVFWV TFSCIAILIP 
    VVFMGCLRIL NILTCGVIGS YSVVLAIDSY WSTSLSYITL NVLKRALNKD FHRAFTNVPF 
    QTNDFIILAV WGMLAVSGIT LQIRRERGRP FFPPHPYKLW KQERERRVTN ILDPSYHIPP 
    LRERLYGRLT QIKGLFQKEQ PAGERTPLLL