Details for: GDF5
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 0.4384
Cell Significance Index: 10.6200 - Cell Name: salivary gland cell (CL0009005)
Fold Change: 0.2589
Cell Significance Index: 3.2200 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.2553
Cell Significance Index: 4.0500 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 0.2279
Cell Significance Index: 1.4100 - Cell Name: osteoblast (CL0000062)
Fold Change: 0.1979
Cell Significance Index: 1.9200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.1493
Cell Significance Index: 3.2700 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.1217
Cell Significance Index: 2.0900 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: 0.0714
Cell Significance Index: 0.9900 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0688
Cell Significance Index: 3.2100 - Cell Name: articular chondrocyte (CL1001607)
Fold Change: 0.0664
Cell Significance Index: 0.3600 - Cell Name: thymocyte (CL0000893)
Fold Change: 0.0336
Cell Significance Index: 0.4300 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: 0.0302
Cell Significance Index: 0.3900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0238
Cell Significance Index: 4.7200 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.0196
Cell Significance Index: 0.4100 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.0169
Cell Significance Index: 0.3500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0113
Cell Significance Index: 0.5300 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0099
Cell Significance Index: 0.7600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0075
Cell Significance Index: 2.7100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0057
Cell Significance Index: 1.0200 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0033
Cell Significance Index: 0.4300 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0028
Cell Significance Index: 0.5600 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.0017
Cell Significance Index: 0.2500 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0010
Cell Significance Index: 1.8800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0001
Cell Significance Index: 0.1900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0001
Cell Significance Index: -0.1800 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0003
Cell Significance Index: -0.1400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0006
Cell Significance Index: -0.9700 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0009
Cell Significance Index: -0.1600 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0013
Cell Significance Index: -0.0600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0015
Cell Significance Index: -0.4300 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0018
Cell Significance Index: -1.1600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0026
Cell Significance Index: -1.9600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0026
Cell Significance Index: -1.9500 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0028
Cell Significance Index: -1.5100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0036
Cell Significance Index: -2.0400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0037
Cell Significance Index: -0.1000 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0038
Cell Significance Index: -2.3900 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0040
Cell Significance Index: -1.8200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0070
Cell Significance Index: -0.1000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0090
Cell Significance Index: -1.2400 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0107
Cell Significance Index: -2.2500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0113
Cell Significance Index: -0.5100 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: -0.0116
Cell Significance Index: -0.1800 - Cell Name: mesangial cell (CL0000650)
Fold Change: -0.0132
Cell Significance Index: -0.1700 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0133
Cell Significance Index: -0.9400 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0136
Cell Significance Index: -1.6700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0141
Cell Significance Index: -1.6100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0142
Cell Significance Index: -1.0600 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.0151
Cell Significance Index: -0.1800 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: -0.0174
Cell Significance Index: -0.2400 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0184
Cell Significance Index: -0.3100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0186
Cell Significance Index: -2.1700 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.0203
Cell Significance Index: -0.3000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0218
Cell Significance Index: -2.2700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0220
Cell Significance Index: -1.3500 - Cell Name: serous cell of epithelium of trachea (CL1000330)
Fold Change: -0.0234
Cell Significance Index: -0.1800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0235
Cell Significance Index: -2.4000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0244
Cell Significance Index: -1.3700 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0245
Cell Significance Index: -1.6500 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.0353
Cell Significance Index: -0.6900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0389
Cell Significance Index: -1.7200 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0397
Cell Significance Index: -1.0800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0447
Cell Significance Index: -1.1500 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0475
Cell Significance Index: -1.8000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0504
Cell Significance Index: -1.4100 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0524
Cell Significance Index: -2.7500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0543
Cell Significance Index: -1.0600 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.0557
Cell Significance Index: -1.4700 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0567
Cell Significance Index: -1.9900 - Cell Name: proerythroblast (CL0000547)
Fold Change: -0.0586
Cell Significance Index: -0.8400 - Cell Name: hepatocyte (CL0000182)
Fold Change: -0.0595
Cell Significance Index: -0.8300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0597
Cell Significance Index: -1.9000 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0608
Cell Significance Index: -2.1400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0620
Cell Significance Index: -1.7700 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0626
Cell Significance Index: -2.0500 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.0644
Cell Significance Index: -1.1100 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0659
Cell Significance Index: -1.7600 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.0662
Cell Significance Index: -2.4300 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.0676
Cell Significance Index: -2.3500 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0708
Cell Significance Index: -2.0400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0711
Cell Significance Index: -1.1900 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0740
Cell Significance Index: -2.1200 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.0745
Cell Significance Index: -0.8100 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.0778
Cell Significance Index: -1.9400 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.0784
Cell Significance Index: -2.4800 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0785
Cell Significance Index: -2.1000 - Cell Name: seromucus secreting cell (CL0000159)
Fold Change: -0.0791
Cell Significance Index: -1.6500 - Cell Name: chondroblast (CL0000058)
Fold Change: -0.0801
Cell Significance Index: -0.4700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0815
Cell Significance Index: -1.7300 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.0822
Cell Significance Index: -2.4200 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.0838
Cell Significance Index: -2.4600 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0859
Cell Significance Index: -2.0600 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.0870
Cell Significance Index: -2.1700 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.0904
Cell Significance Index: -2.3100 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.0905
Cell Significance Index: -1.7900 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.0907
Cell Significance Index: -1.9600 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: -0.0911
Cell Significance Index: -1.2800 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: -0.0912
Cell Significance Index: -1.2500 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.0921
Cell Significance Index: -1.3600 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.0922
Cell Significance Index: -2.3500
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3647034183
Symbol: GDF5_HUMAN
Name: Growth/differentiation factor 5
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7980526
Title: Cloning and expression of recombinant human growth/differentiation factor 5.
PubMed ID: 7980526
PubMed ID: 7961761
Title: Cartilage-derived morphogenetic proteins. New members of the transforming growth factor-beta superfamily predominantly expressed in long bones during human embryonic development.
PubMed ID: 7961761
PubMed ID: 11780052
Title: The DNA sequence and comparative analysis of human chromosome 20.
PubMed ID: 11780052
DOI: 10.1038/414865a
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8589725
Title: A human chondrodysplasia due to a mutation in a TGF-beta superfamily member.
PubMed ID: 8589725
DOI: 10.1038/ng0396-315
PubMed ID: 11276205
PubMed ID: 15530414
Title: Cartilage-derived morphogenetic protein-1 promotes the differentiation of mesenchymal stem cells into chondrocytes.
PubMed ID: 15530414
PubMed ID: 18339631
Title: Targeting of bone morphogenetic protein growth factor complexes to fibrillin.
PubMed ID: 18339631
PubMed ID: 19956691
Title: Mutations in GDF5 reveal a key residue mediating BMP inhibition by NOGGIN.
PubMed ID: 19956691
PubMed ID: 21976273
Title: New insights into the molecular mechanism of multiple synostoses syndrome (SYNS): mutation within the GDF5 knuckle epitope causes noggin-resistance.
PubMed ID: 21976273
DOI: 10.1002/jbmr.532
PubMed ID: 24098149
Title: A GDF5 point mutation strikes twice--causing BDA1 and SYNS2.
PubMed ID: 24098149
PubMed ID: 25092592
Title: Molecular analysis of two novel missense mutations in the GDF5 proregion that reduce protein activity and are associated with brachydactyly type C.
PubMed ID: 25092592
PubMed ID: 26643732
Title: A New Subtype of Multiple-Synostoses Syndrome is Caused by a Mutation in GDF6 that Decreases its Sensitivity to Noggin and Enhances its Potency as a BMP Signal.
PubMed ID: 26643732
DOI: 10.1002/jbmr.2761
PubMed ID: 22828468
Title: A novel mutation in CDMP1 causes brachydactyly type C with 'angel-shaped phalanx'. A genotype-phenotype correlation in the mutational spectrum.
PubMed ID: 22828468
PubMed ID: 19229295
Title: Crystal structure analysis reveals a spring-loaded latch as molecular mechanism for GDF-5-type I receptor specificity.
PubMed ID: 19229295
PubMed ID: 9288098
Title: Disruption of human limb morphogenesis by a dominant negative mutation in CDMP1.
PubMed ID: 9288098
DOI: 10.1038/ng0997-58
PubMed ID: 12121354
Title: Mutation in the cartilage-derived morphogenetic protein-1 (CDMP1) gene in a kindred affected with fibular hypoplasia and complex brachydactyly (DuPan syndrome).
PubMed ID: 12121354
PubMed ID: 14735582
Title: Brachydactyly type C caused by a homozygous missense mutation in the prodomain of CDMP1.
PubMed ID: 14735582
DOI: 10.1002/ajmg.a.20349
PubMed ID: 16222676
Title: Du Pan syndrome phenotype caused by heterozygous pathogenic mutations in CDMP1 gene.
PubMed ID: 16222676
DOI: 10.1002/ajmg.a.30969
PubMed ID: 16127465
Title: Activating and deactivating mutations in the receptor interaction site of GDF5 cause symphalangism or brachydactyly type A2.
PubMed ID: 16127465
DOI: 10.1172/jci25118
PubMed ID: 16532400
Title: GDF5 is a second locus for multiple-synostosis syndrome.
PubMed ID: 16532400
DOI: 10.1086/503204
PubMed ID: 16892395
Title: A novel mutation in GDF5 causes autosomal dominant symphalangism in two Chinese families.
PubMed ID: 16892395
DOI: 10.1002/ajmg.a.31372
PubMed ID: 17384641
Title: A functional polymorphism in the 5' UTR of GDF5 is associated with susceptibility to osteoarthritis.
PubMed ID: 17384641
DOI: 10.1038/2005
PubMed ID: 18629880
Title: Compound heterozygosity for GDF5 in Du Pan type chondrodysplasia.
PubMed ID: 18629880
DOI: 10.1002/ajmg.a.32435
PubMed ID: 18203755
Title: Brachydactyly type A2 associated with a defect in proGDF5 processing.
PubMed ID: 18203755
DOI: 10.1093/hmg/ddn012
PubMed ID: 18283415
Title: Novel point mutations in GDF5 associated with two distinct limb malformations in Chinese: brachydactyly type C and proximal symphalangism.
PubMed ID: 18283415
PubMed ID: 20683927
Title: Mutations in GDF5 presenting as semidominant brachydactyly A1.
PubMed ID: 20683927
DOI: 10.1002/humu.21338
PubMed ID: 25820810
Title: Two novel homozygous missense mutations in the GDF5 gene cause brachydactyly type C.
PubMed ID: 25820810
DOI: 10.1002/ajmg.a.37040
Sequence Information:
- Length: 501
- Mass: 55395
- Checksum: FEBACCFBD7597C37
- Sequence:
MRLPKLLTFL LWYLAWLDLE FICTVLGAPD LGQRPQGTRP GLAKAEAKER PPLARNVFRP GGHSYGGGAT NANARAKGGT GQTGGLTQPK KDEPKKLPPR PGGPEPKPGH PPQTRQATAR TVTPKGQLPG GKAPPKAGSV PSSFLLKKAR EPGPPREPKE PFRPPPITPH EYMLSLYRTL SDADRKGGNS SVKLEAGLAN TITSFIDKGQ DDRGPVVRKQ RYVFDISALE KDGLLGAELR ILRKKPSDTA KPAAPGGGRA AQLKLSSCPS GRQPAALLDV RSVPGLDGSG WEVFDIWKLF RNFKNSAQLC LELEAWERGR AVDLRGLGFD RAARQVHEKA LFLVFGRTKK RDLFFNEIKA RSGQDDKTVY EYLFSQRRKR RAPLATRQGK RPSKNLKARC SRKALHVNFK DMGWDDWIIA PLEYEAFHCE GLCEFPLRSH LEPTNHAVIQ TLMNSMDPES TPPTCCVPTR LSPISILFID SANNVVYKQY EDMVVESCGC R
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.