Details for: DDB2
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.99
Marker Score: 1157 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.56
Marker Score: 1766 - Cell Name: mural cell (CL0008034)
Fold Change: 1.47
Marker Score: 168108 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.25
Marker Score: 1386 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 1.23
Marker Score: 1649 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.18
Marker Score: 18437 - Cell Name: basal cell (CL0000646)
Fold Change: 1.08
Marker Score: 1396 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 1.06
Marker Score: 6757 - Cell Name: basal cell of epithelium of trachea (CL1000348)
Fold Change: 1
Marker Score: 7457 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71691 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47915 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 0.98
Marker Score: 2669 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30394 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 0.97
Marker Score: 9235 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.97
Marker Score: 2121 - Cell Name: plasmablast (CL0000980)
Fold Change: 0.96
Marker Score: 1280 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.95
Marker Score: 995 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.94
Marker Score: 2398 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.93
Marker Score: 478 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.92
Marker Score: 435 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: 0.92
Marker Score: 910 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.9
Marker Score: 2702 - Cell Name: decidual natural killer cell, human (CL0002343)
Fold Change: 0.89
Marker Score: 2449 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5294 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 308 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.85
Marker Score: 3562.5 - Cell Name: mature T cell (CL0002419)
Fold Change: 0.85
Marker Score: 8423 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.84
Marker Score: 4808 - Cell Name: Unknown (CL0000548)
Fold Change: 0.84
Marker Score: 611 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 0.8
Marker Score: 1001 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.8
Marker Score: 1180 - Cell Name: medullary thymic epithelial cell (CL0002365)
Fold Change: 0.79
Marker Score: 1302 - Cell Name: activated CD4-positive, alpha-beta T cell (CL0000896)
Fold Change: 0.79
Marker Score: 570 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.78
Marker Score: 2315 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.78
Marker Score: 16630 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1261 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.78
Marker Score: 311 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.77
Marker Score: 588.5 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.74
Marker Score: 324 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.74
Marker Score: 1505 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.74
Marker Score: 238 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 0.73
Marker Score: 232 - Cell Name: epithelial cell of esophagus (CL0002252)
Fold Change: 0.73
Marker Score: 6311 - Cell Name: osteoclast (CL0000092)
Fold Change: 0.73
Marker Score: 363 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.72
Marker Score: 373 - Cell Name: central nervous system macrophage (CL0000878)
Fold Change: 0.72
Marker Score: 357 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 0.71
Marker Score: 1369 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.7
Marker Score: 4187 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7
Marker Score: 2920 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.69
Marker Score: 331 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.69
Marker Score: 1632 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.68
Marker Score: 2521 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.68
Marker Score: 408 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.68
Marker Score: 173 - Cell Name: brush cell (CL0002204)
Fold Change: 0.67
Marker Score: 614 - Cell Name: melanocyte (CL0000148)
Fold Change: 0.67
Marker Score: 272 - Cell Name: epithelial cell of stratum germinativum of esophagus (CL1000447)
Fold Change: 0.67
Marker Score: 162 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: 0.67
Marker Score: 590 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.66
Marker Score: 663 - Cell Name: ependymal cell (CL0000065)
Fold Change: 0.66
Marker Score: 229 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.66
Marker Score: 11631 - Cell Name: mature alpha-beta T cell (CL0000791)
Fold Change: 0.65
Marker Score: 34597 - Cell Name: exhausted T cell (CL0011025)
Fold Change: 0.65
Marker Score: 373 - Cell Name: blood cell (CL0000081)
Fold Change: 0.64
Marker Score: 7412 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.64
Marker Score: 770 - Cell Name: germ cell (CL0000586)
Fold Change: 0.64
Marker Score: 1110 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.63
Marker Score: 39010 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.63
Marker Score: 789 - Cell Name: mesenchymal lymphangioblast (CL0005021)
Fold Change: 0.63
Marker Score: 141 - Cell Name: cardiac mesenchymal cell (CL0000569)
Fold Change: 0.63
Marker Score: 155 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.63
Marker Score: 416 - Cell Name: Schwann cell (CL0002573)
Fold Change: 0.63
Marker Score: 218 - Cell Name: podocyte (CL0000653)
Fold Change: 0.62
Marker Score: 231 - Cell Name: NKp44-positive group 3 innate lymphoid cell, human (CL0001079)
Fold Change: 0.62
Marker Score: 141 - Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
Fold Change: 0.62
Marker Score: 303 - Cell Name: alveolar type 2 fibroblast cell (CL4028006)
Fold Change: 0.62
Marker Score: 345 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 0.62
Marker Score: 1095 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 0.61
Marker Score: 134 - Cell Name: progenitor cell of endocrine pancreas (CL0002351)
Fold Change: 0.61
Marker Score: 133 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.61
Marker Score: 146 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.61
Marker Score: 355 - Cell Name: CD4-positive helper T cell (CL0000492)
Fold Change: 0.61
Marker Score: 660 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.61
Marker Score: 557 - Cell Name: hepatocyte (CL0000182)
Fold Change: 0.6
Marker Score: 412 - Cell Name: pre-B-I cell (CL0000956)
Fold Change: 0.6
Marker Score: 154 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 0.6
Marker Score: 5650 - Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
Fold Change: 0.6
Marker Score: 562 - Cell Name: smooth muscle cell of prostate (CL1000487)
Fold Change: 0.6
Marker Score: 152 - Cell Name: endothelial tip cell (CL0000704)
Fold Change: 0.6
Marker Score: 139 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 0.6
Marker Score: 685 - Cell Name: columnar/cuboidal epithelial cell (CL0000075)
Fold Change: 0.59
Marker Score: 157 - Cell Name: microglial cell (CL0000129)
Fold Change: 0.59
Marker Score: 1076 - Cell Name: mature B cell (CL0000785)
Fold Change: 0.59
Marker Score: 429 - Cell Name: double-positive, alpha-beta thymocyte (CL0000809)
Fold Change: 0.58
Marker Score: 1139 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 0.58
Marker Score: 236 - Cell Name: fibroblast of connective tissue of prostate (CL1000299)
Fold Change: 0.58
Marker Score: 144 - Cell Name: parietal cell (CL0000162)
Fold Change: 0.58
Marker Score: 161 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.58
Marker Score: 2362 - Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
Fold Change: 0.58
Marker Score: 990 - Cell Name: early lymphoid progenitor (CL0000936)
Fold Change: 0.58
Marker Score: 282.5
Hover over a box to see details here...
Hover over a box to see details here...
Hover over a box to see details here...
Other Information
Genular Protein ID: 3511850902
Symbol: DDB2_HUMAN
Name: DNA damage-binding protein 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8530102
Title: Chromosomal localization and cDNA cloning of the genes (DDB1 and DDB2) for the p127 and p48 subunits of a human damage-specific DNA binding protein.
PubMed ID: 8530102
PubMed ID: 14751237
Title: Human DDB2 splicing variants are dominant negative inhibitors of UV-damaged DNA repair.
PubMed ID: 14751237
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9632823
Title: p48 Activates a UV-damaged-DNA binding factor and is defective in xeroderma pigmentosum group E cells that lack binding activity.
PubMed ID: 9632823
PubMed ID: 9892649
Title: Expression of the p48 xeroderma pigmentosum gene is p53-dependent and is involved in global genomic repair.
PubMed ID: 9892649
PubMed ID: 10777490
Title: Human damage-specific DNA-binding protein p48. Characterization of XPE mutations and regulation following UV irradiation.
PubMed ID: 10777490
PubMed ID: 10777491
Title: Nuclear transport of human DDB protein induced by ultraviolet light.
PubMed ID: 10777491
PubMed ID: 10882109
Title: Xeroderma pigmentosum p48 gene enhances global genomic repair and suppresses UV-induced mutagenesis.
PubMed ID: 10882109
PubMed ID: 11278856
Title: Damaged DNA-binding protein DDB stimulates the excision of cyclobutane pyrimidine dimers in vitro in concert with XPA and replication protein A.
PubMed ID: 11278856
PubMed ID: 11673459
Title: UV-damaged DNA-binding proteins are targets of CUL-4A-mediated ubiquitination and degradation.
PubMed ID: 11673459
PubMed ID: 11705987
Title: DDB accumulates at DNA damage sites immediately after UV irradiation and directly stimulates nucleotide excision repair.
PubMed ID: 11705987
PubMed ID: 12732143
Title: The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage.
PubMed ID: 12732143
PubMed ID: 12944386
Title: In vivo recruitment of XPC to UV-induced cyclobutane pyrimidine dimers by the DDB2 gene product.
PubMed ID: 12944386
PubMed ID: 15882621
Title: UV-induced ubiquitylation of XPC protein mediated by UV-DDB-ubiquitin ligase complex.
PubMed ID: 15882621
PubMed ID: 16223728
Title: DDB1-DDB2 (xeroderma pigmentosum group E) protein complex recognizes a cyclobutane pyrimidine dimer, mismatches, apurinic/apyrimidinic sites, and compound lesions in DNA.
PubMed ID: 16223728
PubMed ID: 16260596
Title: Xeroderma pigmentosum complementation group E protein (XPE/DDB2): purification of various complexes of XPE and analyses of their damaged DNA binding and putative DNA repair properties.
PubMed ID: 16260596
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 17079684
Title: DDB1 functions as a linker to recruit receptor WD40 proteins to CUL4-ROC1 ubiquitin ligases.
PubMed ID: 17079684
DOI: 10.1101/gad.1483206
PubMed ID: 16527807
Title: Cullin 4A-mediated proteolysis of DDB2 protein at DNA damage sites regulates in vivo lesion recognition by XPC.
PubMed ID: 16527807
PubMed ID: 16678110
Title: Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage.
PubMed ID: 16678110
PubMed ID: 16713579
Title: A kinase-independent function of c-Abl in promoting proteolytic destruction of damaged DNA binding proteins.
PubMed ID: 16713579
PubMed ID: 16949367
Title: A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2, which is required for S phase destruction of the replication factor Cdt1.
PubMed ID: 16949367
PubMed ID: 16964240
Title: Molecular architecture and assembly of the DDB1-CUL4A ubiquitin ligase machinery.
PubMed ID: 16964240
DOI: 10.1038/nature05175
PubMed ID: 17041588
Title: CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation.
PubMed ID: 17041588
DOI: 10.1038/ncb1490
PubMed ID: 16473935
Title: The DDB1-CUL4ADDB2 ubiquitin ligase is deficient in xeroderma pigmentosum group E and targets histone H2A at UV-damaged DNA sites.
PubMed ID: 16473935
PubMed ID: 17635991
Title: Dynamic in vivo interaction of DDB2 E3 ubiquitin ligase with UV-damaged DNA is independent of damage-recognition protein XPC.
PubMed ID: 17635991
DOI: 10.1242/jcs.008367
PubMed ID: 18593899
Title: The cullin 4B-based UV-damaged DNA-binding protein ligase binds to UV-damaged chromatin and ubiquitinates histone H2A.
PubMed ID: 18593899
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23159851
Title: The deubiquitinating protein USP24 interacts with DDB2 and regulates DDB2 stability.
PubMed ID: 23159851
DOI: 10.4161/cc.22688
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 26572825
Title: UV damage-induced phosphorylation of HBO1 triggers CRL4DDB2-mediated degradation to regulate cell proliferation.
PubMed ID: 26572825
DOI: 10.1128/mcb.00809-15
PubMed ID: 32789493
Title: The deacetylase SIRT6 promotes the repair of UV-induced DNA damage by targeting DDB2.
PubMed ID: 32789493
DOI: 10.1093/nar/gkaa661
PubMed ID: 19109893
Title: Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.
PubMed ID: 19109893
PubMed ID: 19966799
Title: A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery.
PubMed ID: 19966799
DOI: 10.1038/nsmb.1719
PubMed ID: 22822215
Title: Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
PubMed ID: 22822215
PubMed ID: 8798680
Title: Mutations specific to the xeroderma pigmentosum group E Ddb-phenotype.
PubMed ID: 8798680
Sequence Information:
- Length: 427
- Mass: 47864
- Checksum: E881F21242CA44D2
- Sequence:
MAPKKRPETQ KTSEIVLRPR NKRSRSPLEL EPEAKKLCAK GSGPSRRCDS DCLWVGLAGP QILPPCRSIV RTLHQHKLGR ASWPSVQQGL QQSFLHTLDS YRILQKAAPF DRRATSLAWH PTHPSTVAVG SKGGDIMLWN FGIKDKPTFI KGIGAGGSIT GLKFNPLNTN QFYASSMEGT TRLQDFKGNI LRVFASSDTI NIWFCSLDVS ASSRMVVTGD NVGNVILLNM DGKELWNLRM HKKKVTHVAL NPCCDWFLAT ASVDQTVKIW DLRQVRGKAS FLYSLPHRHP VNAACFSPDG ARLLTTDQKS EIRVYSASQW DCPLGLIPHP HRHFQHLTPI KAAWHPRYNL IVVGRYPDPN FKSCTPYELR TIDVFDGNSG KMMCQLYDPE SSGISSLNEF NPMGDTLASA MGYHILIWSQ EEARTRK
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.