Details for: GATM
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 160.4678
Cell Significance Index: -24.9600 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 92.1372
Cell Significance Index: -23.3700 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 53.1929
Cell Significance Index: -21.6100 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 20.2440
Cell Significance Index: -24.9600 - Cell Name: granulosa cell (CL0000501)
Fold Change: 7.7631
Cell Significance Index: 204.1300 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 4.4023
Cell Significance Index: 513.0400 - Cell Name: theca cell (CL0000503)
Fold Change: 3.4366
Cell Significance Index: 20.1900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 3.1997
Cell Significance Index: 546.3600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 3.0956
Cell Significance Index: 306.2300 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 2.0677
Cell Significance Index: 34.8300 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.2583
Cell Significance Index: 136.8700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.9950
Cell Significance Index: 46.3900 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 0.6545
Cell Significance Index: 9.6600 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 0.6333
Cell Significance Index: 8.1100 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.6312
Cell Significance Index: 44.6400 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: 0.6211
Cell Significance Index: 49.2000 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.6114
Cell Significance Index: 17.6200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5708
Cell Significance Index: 515.3500 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5261
Cell Significance Index: 27.3300 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.5064
Cell Significance Index: 10.9700 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.4963
Cell Significance Index: 219.4300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.4637
Cell Significance Index: 92.0300 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.3999
Cell Significance Index: 49.1800 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.3866
Cell Significance Index: 3.5600 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: 0.3742
Cell Significance Index: 42.7100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.3721
Cell Significance Index: 67.0800 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.3509
Cell Significance Index: 5.3300 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.3240
Cell Significance Index: 64.9900 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2147
Cell Significance Index: 40.8600 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: 0.2127
Cell Significance Index: 1.2300 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 0.2117
Cell Significance Index: 3.2800 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.1709
Cell Significance Index: 19.5800 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.1648
Cell Significance Index: 11.0800 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1289
Cell Significance Index: 20.9700 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.1179
Cell Significance Index: 13.9000 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.1142
Cell Significance Index: 8.5100 - Cell Name: thyroid follicular cell (CL0002258)
Fold Change: 0.0762
Cell Significance Index: 0.8100 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0704
Cell Significance Index: 1.7600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0189
Cell Significance Index: 13.8400 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0098
Cell Significance Index: 18.5100 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0085
Cell Significance Index: 0.3000 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0081
Cell Significance Index: 2.9100 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0002
Cell Significance Index: 0.4600 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0019
Cell Significance Index: -0.2400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0032
Cell Significance Index: -4.9900 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.0064
Cell Significance Index: -0.1100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: -0.0067
Cell Significance Index: -4.6000 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0071
Cell Significance Index: -3.8600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0108
Cell Significance Index: -7.9700 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.0123
Cell Significance Index: -0.1000 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0149
Cell Significance Index: -20.3000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0254
Cell Significance Index: -2.6400 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0263
Cell Significance Index: -16.4100 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0288
Cell Significance Index: -18.2800 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0330
Cell Significance Index: -24.9700 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0360
Cell Significance Index: -20.3200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0447
Cell Significance Index: -20.2800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0525
Cell Significance Index: -5.3600 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: -0.0589
Cell Significance Index: -0.4500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0660
Cell Significance Index: -18.9800 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0830
Cell Significance Index: -3.7600 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0941
Cell Significance Index: -19.8300 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.1072
Cell Significance Index: -1.1100 - Cell Name: kidney cell (CL1000497)
Fold Change: -0.1146
Cell Significance Index: -0.9100 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1235
Cell Significance Index: -16.9600 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1356
Cell Significance Index: -19.7100 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.1421
Cell Significance Index: -18.2200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.1497
Cell Significance Index: -11.4900 - Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: -0.2017
Cell Significance Index: -2.8200 - Cell Name: intrahepatic cholangiocyte (CL0002538)
Fold Change: -0.2297
Cell Significance Index: -0.8700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2310
Cell Significance Index: -7.4000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.2418
Cell Significance Index: -13.5700 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.2487
Cell Significance Index: -6.9500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.2572
Cell Significance Index: -12.0900 - Cell Name: glioblast (CL0000030)
Fold Change: -0.2691
Cell Significance Index: -1.6900 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.2697
Cell Significance Index: -14.0500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.2902
Cell Significance Index: -17.7900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.3041
Cell Significance Index: -13.4500 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.3136
Cell Significance Index: -8.3900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.3598
Cell Significance Index: -18.8900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.3887
Cell Significance Index: -25.0800 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.3978
Cell Significance Index: -15.0700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.4117
Cell Significance Index: -25.9500 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.4224
Cell Significance Index: -10.7900 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.4305
Cell Significance Index: -26.4600 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: -0.4859
Cell Significance Index: -5.2100 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.4994
Cell Significance Index: -14.2500 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.5149
Cell Significance Index: -8.6600 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.5405
Cell Significance Index: -19.8400 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.5461
Cell Significance Index: -8.2300 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: -0.5466
Cell Significance Index: -9.4500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.6078
Cell Significance Index: -21.1200 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6305
Cell Significance Index: -18.5700 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: -0.6333
Cell Significance Index: -3.0800 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.6403
Cell Significance Index: -32.3600 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.6585
Cell Significance Index: -23.0700 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.6610
Cell Significance Index: -16.5100 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.6719
Cell Significance Index: -17.2700 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: -0.7189
Cell Significance Index: -6.0600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.7315
Cell Significance Index: -23.9500
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3339192597
Symbol: GATM_HUMAN
Name: Glycine amidinotransferase, mitochondrial
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8313955
Title: The amino acid sequences of human and pig L-arginine:glycine amidinotransferase.
PubMed ID: 8313955
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16572171
Title: Analysis of the DNA sequence and duplication history of human chromosome 15.
PubMed ID: 16572171
DOI: 10.1038/nature04601
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 3800397
Title: The purification and characterization of human kidney L-arginine:glycine amidinotransferase.
PubMed ID: 3800397
PubMed ID: 9148748
Title: Recombinant expression and isolation of human L-arginine:glycine amidinotransferase and identification of its active-site cysteine residue.
PubMed ID: 9148748
DOI: 10.1042/bj3220771
PubMed ID: 9165070
Title: Structure and reaction mechanism of L-arginine:glycine amidinotransferase.
PubMed ID: 9165070
PubMed ID: 16820567
Title: Myocardial expression of the arginine:glycine amidinotransferase gene is elevated in heart failure and normalized after recovery: potential implications for local creatine synthesis.
PubMed ID: 16820567
PubMed ID: 16125225
Title: Unbalanced placental expression of imprinted genes in human intrauterine growth restriction.
PubMed ID: 16125225
PubMed ID: 16614068
Title: Limited evolutionary conservation of imprinting in the human placenta.
PubMed ID: 16614068
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 36543883
Title: Guanidino acid hydrolysis by the human enzyme annotated as agmatinase.
PubMed ID: 36543883
PubMed ID: 9218780
Title: Crystal structure and mechanism of human L-arginine:glycine amidinotransferase: a mitochondrial enzyme involved in creatine biosynthesis.
PubMed ID: 9218780
PubMed ID: 9266688
Title: Substrate binding and catalysis by L-arginine:glycine amidinotransferase -- a mutagenesis and crystallographic study.
PubMed ID: 9266688
PubMed ID: 9915841
Title: The ligand-induced structural changes of human L-arginine:glycine amidinotransferase. A mutational and crystallographic study.
PubMed ID: 9915841
PubMed ID: 11555793
Title: Arginine:glycine amidinotransferase deficiency: the third inborn error of creatine metabolism in humans.
PubMed ID: 11555793
DOI: 10.1086/323765
PubMed ID: 20682460
Title: l-arginine:glycine amidinotransferase (AGAT) deficiency: clinical presentation and response to treatment in two patients with a novel mutation.
PubMed ID: 20682460
PubMed ID: 22386973
Title: Developmental progress and creatine restoration upon long-term creatine supplementation of a patient with arginine:glycine amidinotransferase deficiency.
PubMed ID: 22386973
PubMed ID: 23660394
Title: Biochemical, molecular, and clinical diagnoses of patients with cerebral creatine deficiency syndromes.
PubMed ID: 23660394
PubMed ID: 23770102
Title: Creatine deficiency syndrome. A treatable myopathy due to arginine-glycine amidinotransferase (AGAT) deficiency.
PubMed ID: 23770102
PubMed ID: 26490222
Title: Arginine:glycine amidinotransferase (AGAT) deficiency: Clinical features and long term outcomes in 16 patients diagnosed worldwide.
PubMed ID: 26490222
PubMed ID: 27233232
Title: Arginine-Glycine Amidinotransferase Deficiency and Functional Characterization of Missense Variants in GATM.
PubMed ID: 27233232
DOI: 10.1002/humu.23018
PubMed ID: 29654216
Title: Glycine amidinotransferase (GATM), renal Fanconi syndrome, and kidney failure.
PubMed ID: 29654216
Sequence Information:
- Length: 423
- Mass: 48455
- Checksum: 5BEF7A8A039B70FB
- Sequence:
MLRVRCLRGG SRGAEAVHYI GSRLGRTLTG WVQRTFQSTQ AATASSRNSC AADDKATEPL PKDCPVSSYN EWDPLEEVIV GRAENACVPP FTIEVKANTY EKYWPFYQKQ GGHYFPKDHL KKAVAEIEEM CNILKTEGVT VRRPDPIDWS LKYKTPDFES TGLYSAMPRD ILIVVGNEII EAPMAWRSRF FEYRAYRSII KDYFHRGAKW TTAPKPTMAD ELYNQDYPIH SVEDRHKLAA QGKFVTTEFE PCFDAADFIR AGRDIFAQRS QVTNYLGIEW MRRHLAPDYR VHIISFKDPN PMHIDATFNI IGPGIVLSNP DRPCHQIDLF KKAGWTIITP PTPIIPDDHP LWMSSKWLSM NVLMLDEKRV MVDANEVPIQ KMFEKLGITT IKVNIRNANS LGGGFHCWTC DVRRRGTLQS YLD
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.