Details for: STXBP6

Gene ID: 29091

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: STXBP6

Ensembl ID: ENSG00000168952

Description: syntaxin binding protein 6

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • sst GABAergic cortical interneuron CL4023017
    CSI 55.96
    rCSI 72.14%
    PRS 60.55
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 32.59
    rCSI 40.54%
    PRS 57.27
  • conventional dendritic cell CL0000990
    CSI 32.49
    rCSI 27.13%
    PRS 79.15
  • sncg GABAergic cortical interneuron CL4023015
    CSI 24.5
    rCSI 39.4%
    PRS 61.12
  • CD8-positive, alpha-beta memory T cell, CD45RO-positive CL0001203
    CSI 23.77
    rCSI 28.81%
    PRS 59.04
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 22.45
    rCSI 70.23%
    PRS 63.53
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 20.65
    rCSI 44.8%
    PRS 65.26
  • capillary endothelial cell CL0002144
    CSI 18.48
    rCSI 33.87%
    PRS 82.46
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 17.82
    rCSI 67.34%
    PRS 59.9
  • cardiac muscle cell CL0000746
    CSI 17.62
    rCSI 25.29%
    PRS 67.4
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 15.62
    rCSI 37.97%
    PRS 57.43
  • cerebral cortex endothelial cell CL1001602
    CSI 14.26
    rCSI 24.66%
    PRS 68.86
  • melanocyte CL0000148
    CSI 13.72
    rCSI 10.16%
    PRS 70.93
  • club cell CL0000158
    CSI 13.37
    rCSI 19.58%
    PRS 72.03
  • ependymal cell CL0000065
    CSI 12.62
    rCSI 25.61%
    PRS 55.98
  • endothelial cell of placenta CL0009092
    CSI 10.86
    rCSI 53.51%
    PRS 85.6
  • regulatory T cell CL0000815
    CSI 10.04
    rCSI 11.64%
    PRS 79.66
  • neural crest cell CL0011012
    CSI 9.49
    rCSI 7.5%
    PRS 65.91
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 9.35
    rCSI 15.7%
    PRS 59.4
  • small intestine goblet cell CL1000495
    CSI 9.19
    rCSI 20.14%
    PRS 83.57
  • pulmonary capillary endothelial cell CL4028001
    CSI 9.1
    rCSI 17.35%
    PRS 87.55
  • BEST4+ enteroycte CL4030026
    CSI 9.03
    rCSI 11.23%
    PRS 78.99
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 8.47
    rCSI 9.79%
    PRS 69.96
  • cerebral cortex neuron CL0010012
    CSI 8.46
    rCSI 34.48%
    PRS 69.82
  • duct epithelial cell CL0000068
    CSI 8.2
    rCSI 11.99%
    PRS 82.42
  • basal cell of epidermis CL0002187
    CSI 8.08
    rCSI 14.32%
    PRS 47.31
  • starburst amacrine cell CL0004232
    CSI 7.92
    rCSI 66.62%
    PRS 66.16
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 7.6
    rCSI 9.75%
    PRS 73.85
  • secretory cell CL0000151
    CSI 7.5
    rCSI 7.83%
    PRS 76.9
  • basophil CL0000767
    CSI 7.08
    rCSI 14.98%
    PRS 89.4
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 7
    rCSI 12.36%
    PRS 58.61
  • GABAergic amacrine cell CL4030027
    CSI 6.45
    rCSI 22.1%
    PRS 64.25
  • inhibitory interneuron CL0000498
    CSI 6.19
    rCSI 14.29%
    PRS 65.58
  • stem cell CL0000034
    CSI 6.18
    rCSI 5.95%
    PRS 70.51
  • adipocyte CL0000136
    CSI 6
    rCSI 7.71%
    PRS 67.99
  • Mueller cell CL0000636
    CSI 5.92
    rCSI 13.51%
    PRS 69.07
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.78
    rCSI 5.56%
    PRS 76.85
  • neural progenitor cell CL0011020
    CSI 5.57
    rCSI 24.5%
    PRS 66.18
  • enteroendocrine cell CL0000164
    CSI 5.54
    rCSI 7.57%
    PRS 77.88
  • intestine goblet cell CL0019031
    CSI 5.15
    rCSI 4.57%
    PRS 75.4
  • cytotoxic T cell CL0000910
    CSI 5.12
    rCSI 29.36%
    PRS 82.19
  • keratinocyte CL0000312
    CSI 5.11
    rCSI 4.29%
    PRS 80.59
  • astrocyte of the cerebral cortex CL0002605
    CSI 5.06
    rCSI 11.35%
    PRS 60.15
  • Hofbauer cell CL3000001
    CSI 4.92
    rCSI 9.29%
    PRS 85.96
  • regular atrial cardiac myocyte CL0002129
    CSI 4.86
    rCSI 15.65%
    PRS 74.6
  • chondrocyte CL0000138
    CSI 4.85
    rCSI 7.72%
    PRS 70.42
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 4.78
    rCSI 4.32%
    PRS 75.81
  • pancreatic A cell CL0000171
    CSI 4.56
    rCSI 4.78%
    PRS 81.14
  • myofibroblast cell CL0000186
    CSI 4.55
    rCSI 6.31%
    PRS 75.11
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 4.45
    rCSI 11.61%
    PRS 78.57
  • transit amplifying cell of colon CL0009011
    CSI 4.27
    rCSI 5.02%
    PRS 79.37
  • blood vessel endothelial cell CL0000071
    CSI 4.26
    rCSI 8.84%
    PRS 74.35
  • melanocyte of skin CL1000458
    CSI 4.18
    rCSI 5.7%
    PRS 44.8
  • VIP GABAergic cortical interneuron CL4023016
    CSI 3.91
    rCSI 4.67%
    PRS 59.37
  • goblet cell CL0000160
    CSI 3.8
    rCSI 3.59%
    PRS 76.46
  • mononuclear phagocyte CL0000113
    CSI 3.74
    rCSI 8.22%
    PRS 81.42
  • glutamatergic neuron CL0000679
    CSI 3.68
    rCSI 7.56%
    PRS 65.35
  • central nervous system neuron CL2000029
    CSI 3.67
    rCSI 27%
    PRS 64.73
  • enteroendocrine cell of small intestine CL0009006
    CSI 3.64
    rCSI 8%
    PRS 86.29
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 3.55
    rCSI 12.79%
    PRS 57.34
  • innate lymphoid cell CL0001065
    CSI 3.43
    rCSI 7.08%
    PRS 75.41
  • helper T cell CL0000912
    CSI 3.29
    rCSI 4.65%
    PRS 77.55
  • pulmonary alveolar type 1 cell CL0002062
    CSI 3.28
    rCSI 18.91%
    PRS 74.53
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 3.27
    rCSI 4.64%
    PRS 74.35
  • lung secretory cell CL1000272
    CSI 3.24
    rCSI 8.03%
    PRS 77.14
  • luminal cell of prostate epithelium CL0002340
    CSI 3.18
    rCSI 17.1%
    PRS 85.56
  • pulmonary artery endothelial cell CL1001568
    CSI 3.17
    rCSI 4.31%
    PRS 86.4
  • intestinal epithelial cell CL0002563
    CSI 3.13
    rCSI 3.27%
    PRS 75.22
  • intrahepatic cholangiocyte CL0002538
    CSI 3.05
    rCSI 7.32%
    PRS 82.44
  • fibroblast of cardiac tissue CL0002548
    CSI 2.98
    rCSI 14.25%
    PRS 77.62
  • granulocyte CL0000094
    CSI 2.97
    rCSI 4.54%
    PRS 85.11
  • direct pathway medium spiny neuron CL4023026
    CSI 2.86
    rCSI 68.37%
    PRS 57.82
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.84
    rCSI 68.45%
    PRS 58.37
  • mast cell CL0000097
    CSI 2.8
    rCSI 6.05%
    PRS 83.99
  • retinal blood vessel endothelial cell CL0002585
    CSI 2.68
    rCSI 4.27%
    PRS 81.3
  • respiratory goblet cell CL0002370
    CSI 2.55
    rCSI 27.71%
    PRS 86.37
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 2.4
    rCSI 14.14%
    PRS 60.22
  • endocardial cell CL0002350
    CSI 2.4
    rCSI 11.48%
    PRS 74.4
  • alveolar adventitial fibroblast CL4028006
    CSI 2.39
    rCSI 3.78%
    PRS 79.33
  • lung neuroendocrine cell CL1000223
    CSI 2.38
    rCSI 3.52%
    PRS 82.07
  • mesothelial cell CL0000077
    CSI 2.32
    rCSI 9.06%
    PRS 55.76
  • amacrine cell CL0000561
    CSI 2.3
    rCSI 6.67%
    PRS 66.94
  • cardiac endothelial cell CL0010008
    CSI 2.3
    rCSI 9.27%
    PRS 77.17
  • respiratory basal cell CL0002633
    CSI 2.29
    rCSI 2.37%
    PRS 81.97
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 2.19
    rCSI 3.98%
    PRS 68.99
  • colonocyte CL1000347
    CSI 2.18
    rCSI 3.12%
    PRS 78.7
  • lung endothelial cell CL1001567
    CSI 2.14
    rCSI 5%
    PRS 88.68
  • mucus secreting cell CL0000319
    CSI 2.13
    rCSI 3.38%
    PRS 86.68
  • GABAergic neuron CL0000617
    CSI 2.07
    rCSI 6.94%
    PRS 61.71
  • pancreatic ductal cell CL0002079
    CSI 2
    rCSI 3.89%
    PRS 80.78
  • pancreatic PP cell CL0002275
    CSI 1.97
    rCSI 7.84%
    PRS 85.79
  • intestinal tuft cell CL0019032
    CSI 1.94
    rCSI 2.96%
    PRS 81.59
  • adventitial cell CL0002503
    CSI 1.9
    rCSI 4.55%
    PRS 82.09
  • colon goblet cell CL0009039
    CSI 1.87
    rCSI 4.45%
    PRS 83.49
  • vascular leptomeningeal cell CL4023051
    CSI 1.81
    rCSI 3.18%
    PRS 71.03
  • acinar cell CL0000622
    CSI 1.8
    rCSI 2.64%
    PRS 87.11
  • hepatic stellate cell CL0000632
    CSI 1.76
    rCSI 6.6%
    PRS 69.93
  • lung microvascular endothelial cell CL2000016
    CSI 1.74
    rCSI 33.52%
    PRS 86.15
  • parietal epithelial cell CL1000452
    CSI 1.68
    rCSI 4.5%
    PRS 69.08
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.67
    rCSI 4.83%
    PRS 77.3
  • mesenchymal stem cell CL0000134
    CSI 0.2
    rCSI 2.2%
    PRS 83.5%
  • megakaryocyte progenitor cell CL0000553
    CSI 0.2
    rCSI 3.8%
    PRS 94.0%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.3
    rCSI 4.4%
    PRS 86.6%
  • P/D1 enteroendocrine cell CL0002268
    CSI 0.6
    rCSI 3.2%
    PRS 86.6%
  • stromal cell CL0000499
    CSI 0.7
    rCSI 1.9%
    PRS 72.6%
  • type EC enteroendocrine cell CL0000577
    CSI 0.7
    rCSI 2.5%
    PRS 82.2%
  • pancreatic epsilon cell CL0005019
    CSI 0.7
    rCSI 3.3%
    PRS 87.3%
  • cardiac blood vessel endothelial cell CL0010006
    CSI 0.7
    rCSI 5.3%
    PRS 71.2%
  • transit amplifying cell of small intestine CL0009012
    CSI 0.8
    rCSI 3.7%
    PRS 86.4%
  • vein endothelial cell of respiratory system CL4033008
    CSI 0.9
    rCSI 6.2%
    PRS 84.8%
  • kidney collecting duct intercalated cell CL1001432
    CSI 1.0
    rCSI 6.8%
    PRS 76.2%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 1.0
    rCSI 5.0%
    PRS 83.8%
  • endothelial cell of uterus CL0009095
    CSI 1.0
    rCSI 7.6%
    PRS 86.3%
  • tracheobronchial serous cell CL0019001
    CSI 1.1
    rCSI 4.6%
    PRS 85.2%
  • mesenchymal cell CL0008019
    CSI 1.2
    rCSI 3.1%
    PRS 71.0%
  • transit amplifying cell CL0009010
    CSI 1.2
    rCSI 1.8%
    PRS 86.4%
  • M cell of gut CL0000682
    CSI 1.2
    rCSI 1.3%
    PRS 83.0%
  • tuft cell of colon CL0009041
    CSI 1.2
    rCSI 2.8%
    PRS 84.2%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.2
    rCSI 3.2%
    PRS 72.9%
  • renal principal cell CL0005009
    CSI 1.2
    rCSI 3.2%
    PRS 79.0%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 1.3
    rCSI 3.4%
    PRS 82.9%
  • epithelial cell of proximal tubule CL0002306
    CSI 1.3
    rCSI 3.1%
    PRS 70.2%
  • keratocyte CL0002363
    CSI 1.3
    rCSI 3.2%
    PRS 81.3%
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 1.4
    rCSI 3.2%
    PRS 64.5%
  • retinal ganglion cell CL0000740
    CSI 1.4
    rCSI 3.0%
    PRS 63.3%
  • respiratory suprabasal cell CL4033048
    CSI 1.4
    rCSI 1.8%
    PRS 81.0%
  • medium spiny neuron CL1001474
    CSI 1.4
    rCSI 12.3%
    PRS 65.3%
  • brain vascular cell CL4023072
    CSI 1.5
    rCSI 15.4%
    PRS 71.6%
  • dopaminergic neuron CL0000700
    CSI 1.5
    rCSI 8.7%
    PRS 63.4%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.6
    rCSI 4.3%
    PRS 85.4%
  • tendon cell CL0000388
    CSI 1.6
    rCSI 4.1%
    PRS 85.3%
  • colon epithelial cell CL0011108
    CSI 1.6
    rCSI 1.7%
    PRS 74.9%
  • suprabasal keratinocyte CL4033013
    CSI 1.6
    rCSI 2.6%
    PRS 44.8%
  • conjunctival epithelial cell CL1000432
    CSI 1.6
    rCSI 2.5%
    PRS 77.9%
  • regular ventricular cardiac myocyte CL0002131
    CSI 1.6
    rCSI 10.1%
    PRS 69.3%
  • pancreatic acinar cell CL0002064
    CSI 1.6
    rCSI 2.2%
    PRS 83.3%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.7
    rCSI 4.8%
    PRS 77.3%
  • parietal epithelial cell CL1000452
    CSI 1.7
    rCSI 4.5%
    PRS 69.1%
  • lung microvascular endothelial cell CL2000016
    CSI 1.7
    rCSI 33.5%
    PRS 86.2%
  • hepatic stellate cell CL0000632
    CSI 1.8
    rCSI 6.6%
    PRS 69.9%
  • acinar cell CL0000622
    CSI 1.8
    rCSI 2.6%
    PRS 87.1%
  • vascular leptomeningeal cell CL4023051
    CSI 1.8
    rCSI 3.2%
    PRS 71.0%
  • colon goblet cell CL0009039
    CSI 1.9
    rCSI 4.5%
    PRS 83.5%
  • adventitial cell CL0002503
    CSI 1.9
    rCSI 4.6%
    PRS 82.1%
  • intestinal tuft cell CL0019032
    CSI 1.9
    rCSI 3.0%
    PRS 81.6%
  • pancreatic PP cell CL0002275
    CSI 2.0
    rCSI 7.8%
    PRS 85.8%
  • pancreatic ductal cell CL0002079
    CSI 2.0
    rCSI 3.9%
    PRS 80.8%
  • GABAergic neuron CL0000617
    CSI 2.1
    rCSI 6.9%
    PRS 61.7%
  • mucus secreting cell CL0000319
    CSI 2.1
    rCSI 3.4%
    PRS 86.7%
  • lung endothelial cell CL1001567
    CSI 2.1
    rCSI 5.0%
    PRS 88.7%
  • colonocyte CL1000347
    CSI 2.2
    rCSI 3.1%
    PRS 78.7%
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 2.2
    rCSI 4.0%
    PRS 69.0%
  • respiratory basal cell CL0002633
    CSI 2.3
    rCSI 2.4%
    PRS 82.0%
  • cardiac endothelial cell CL0010008
    CSI 2.3
    rCSI 9.3%
    PRS 77.2%
  • amacrine cell CL0000561
    CSI 2.3
    rCSI 6.7%
    PRS 66.9%
  • mesothelial cell CL0000077
    CSI 2.3
    rCSI 9.1%
    PRS 55.8%
  • lung neuroendocrine cell CL1000223
    CSI 2.4
    rCSI 3.5%
    PRS 82.1%
  • alveolar adventitial fibroblast CL4028006
    CSI 2.4
    rCSI 3.8%
    PRS 79.3%
  • endocardial cell CL0002350
    CSI 2.4
    rCSI 11.5%
    PRS 74.4%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 2.4
    rCSI 14.1%
    PRS 60.2%
  • respiratory goblet cell CL0002370
    CSI 2.6
    rCSI 27.7%
    PRS 86.4%
  • retinal blood vessel endothelial cell CL0002585
    CSI 2.7
    rCSI 4.3%
    PRS 81.3%
  • mast cell CL0000097
    CSI 2.8
    rCSI 6.1%
    PRS 84.0%
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.8
    rCSI 68.5%
    PRS 58.4%
  • direct pathway medium spiny neuron CL4023026
    CSI 2.9
    rCSI 68.4%
    PRS 57.8%
  • granulocyte CL0000094
    CSI 3.0
    rCSI 4.5%
    PRS 85.1%
  • fibroblast of cardiac tissue CL0002548
    CSI 3.0
    rCSI 14.3%
    PRS 77.6%
  • intrahepatic cholangiocyte CL0002538
    CSI 3.1
    rCSI 7.3%
    PRS 82.4%
  • intestinal epithelial cell CL0002563
    CSI 3.1
    rCSI 3.3%
    PRS 75.2%
  • pulmonary artery endothelial cell CL1001568
    CSI 3.2
    rCSI 4.3%
    PRS 86.4%
  • luminal cell of prostate epithelium CL0002340
    CSI 3.2
    rCSI 17.1%
    PRS 85.6%
  • lung secretory cell CL1000272
    CSI 3.2
    rCSI 8.0%
    PRS 77.1%
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 3.3
    rCSI 4.6%
    PRS 74.4%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 3.3
    rCSI 18.9%
    PRS 74.5%
  • helper T cell CL0000912
    CSI 3.3
    rCSI 4.7%
    PRS 77.6%
  • innate lymphoid cell CL0001065
    CSI 3.4
    rCSI 7.1%
    PRS 75.4%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 3.6
    rCSI 12.8%
    PRS 57.3%
  • enteroendocrine cell of small intestine CL0009006
    CSI 3.6
    rCSI 8.0%
    PRS 86.3%
  • central nervous system neuron CL2000029
    CSI 3.7
    rCSI 27.0%
    PRS 64.7%
  • glutamatergic neuron CL0000679
    CSI 3.7
    rCSI 7.6%
    PRS 65.4%
  • mononuclear phagocyte CL0000113
    CSI 3.7
    rCSI 8.2%
    PRS 81.4%
  • goblet cell CL0000160
    CSI 3.8
    rCSI 3.6%
    PRS 76.5%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 3.9
    rCSI 4.7%
    PRS 59.4%
  • melanocyte of skin CL1000458
    CSI 4.2
    rCSI 5.7%
    PRS 44.8%
  • blood vessel endothelial cell CL0000071
    CSI 4.3
    rCSI 8.8%
    PRS 74.4%
  • transit amplifying cell of colon CL0009011
    CSI 4.3
    rCSI 5.0%
    PRS 79.4%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 4.5
    rCSI 11.6%
    PRS 78.6%
  • myofibroblast cell CL0000186
    CSI 4.6
    rCSI 6.3%
    PRS 75.1%
  • pancreatic A cell CL0000171
    CSI 4.6
    rCSI 4.8%
    PRS 81.1%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 4.8
    rCSI 4.3%
    PRS 75.8%
  • chondrocyte CL0000138
    CSI 4.9
    rCSI 7.7%
    PRS 70.4%
  • regular atrial cardiac myocyte CL0002129
    CSI 4.9
    rCSI 15.7%
    PRS 74.6%
  • Hofbauer cell CL3000001
    CSI 4.9
    rCSI 9.3%
    PRS 86.0%
  • astrocyte of the cerebral cortex CL0002605
    CSI 5.1
    rCSI 11.4%
    PRS 60.2%
  • keratinocyte CL0000312
    CSI 5.1
    rCSI 4.3%
    PRS 80.6%
  • cytotoxic T cell CL0000910
    CSI 5.1
    rCSI 29.4%
    PRS 82.2%
  • intestine goblet cell CL0019031
    CSI 5.2
    rCSI 4.6%
    PRS 75.4%
  • enteroendocrine cell CL0000164
    CSI 5.5
    rCSI 7.6%
    PRS 77.9%
  • neural progenitor cell CL0011020
    CSI 5.6
    rCSI 24.5%
    PRS 66.2%
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.8
    rCSI 5.6%
    PRS 76.9%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [STXBP6](/details-gene/29091) (Syntaxin Binding Protein 6), also known as Amisyn, is a protein-coding gene located on chromosome 14q12. Functionally, it is characterized as a negative regulator of SNARE complex assembly and exocytosis, and it also participates in cell-cell adhesion through cadherin binding ([Link](https://doi.org/10.1074/jbc.m204929200)). Expression data indicate that [STXBP6](/details-gene/29091) is a significant gene in a diverse array of cell types, with particularly high significance in neuronal subtypes, such as [sst GABAergic cortical interneuron](/details-cell/CL4023017), and in immune cells, including [conventional dendritic cell](/details-cell/CL0000990). This broad but distinct expression profile suggests it plays a fundamental role in regulating cellular secretion and adhesion across multiple biological systems. ## Cellular Roles and Expression Landscape The expression profile of [STXBP6](/details-gene/29091) highlights its importance in functionally distinct cellular systems, most notably the central nervous system and the immune system. **Overall**, the gene shows the highest significance in specific subtypes of inhibitory neurons, including [sst GABAergic cortical interneuron](/details-cell/CL4023017) (CSI: 55.96) and [pvalb GABAergic cortical interneuron](/details-cell/CL4023018) (CSI: 32.59), as well as certain glutamatergic neurons like [L2/3 intratelencephalic projecting glutamatergic neuron](/details-cell/CL4030059) (CSI: 20.65). This pattern strongly suggests a role in modulating neurotransmitter release and synaptic function within the cerebral cortex. Concurrently, [STXBP6](/details-gene/29091) is a significant gene in key immune cell populations. It is highly ranked in [conventional dendritic cell](/details-cell/CL0000990) (CSI: 32.49) and [CD8-positive, alpha-beta memory T cell, CD45RO-positive](/details-cell/CL0001203) (CSI: 23.77), indicating potential involvement in antigen presentation, immune cell trafficking, or cytotoxic granule release. Beyond these primary domains, the gene is also notably expressed in various structural and barrier cells, such as [capillary endothelial cell](/details-cell/CL0002144) (CSI: 18.48), [cardiac muscle cell](/details-cell/CL0000746) (CSI: 17.62), [melanocyte](/details-cell/CL0000148) (CSI: 13.72), and [club cell](/details-cell/CL0000158) (CSI: 13.37). This diverse expression landscape points to a conserved role for [STXBP6](/details-gene/29091) in regulating vesicle trafficking and membrane fusion events that are common to many cell types. ## Pathways and Molecular Function The functional annotations for [STXBP6](/details-gene/29091) are highly consistent with its observed cellular expression pattern. Its primary molecular function involves the regulation of SNARE complexes, which are central to membrane fusion events. - **Regulation of Exocytosis:** [STXBP6](/details-gene/29091) is annotated for the negative regulation of exocytosis ([GO:0045920](https://www.ebi.ac.uk/QuickGO/term/GO:0045920)) and regulation of SNARE complex assembly ([GO:0035542](https://www.ebi.ac.uk/QuickGO/term/GO:0035542)). This function is likely critical in its highest-expressing cells, the GABAergic interneurons, where it may act as a brake on the release of the inhibitory neurotransmitter GABA. This role was first suggested in its initial characterization as a novel syntaxin-binding protein ([Link](https://doi.org/10.1074/jbc.m204929200)). - **Cell Adhesion:** The gene is also involved in cell-cell adhesion ([GO:0098609](https://www.ebi.ac.uk/QuickGO/term/GO:0098609)) and cadherin binding ([GO:0098641](https://www.ebi.ac.uk/QuickGO/term/GO:0098641)), with localization to the adherens junction ([GO:0005912](https://www.ebi.ac.uk/QuickGO/term/GO:0005912)). This function may be particularly relevant in endothelial cells, where it could regulate vascular integrity, or in immune cells, where it might contribute to the stability of cell-cell contacts during processes like antigen presentation. ## Research Directions The widespread yet specific expression of [STXBP6](/details-gene/29091) in both the nervous and immune systems, coupled with its dual roles in exocytosis and adhesion, opens several avenues for future investigation. **Testable Hypotheses:** 1. Given its high significance in GABAergic interneurons and its known function as a negative regulator of exocytosis, [STXBP6](/details-gene/29091) likely acts as a key molecular brake on GABA release. Its dysregulation could therefore contribute to an imbalance of excitation-inhibition in the cortex, a hallmark of neurological disorders such as epilepsy. 2. The co-expression of [STXBP6](/details-gene/29091) in [conventional dendritic cell](/details-cell/CL0000990)s and memory T cells, combined with its role in cell adhesion, suggests that it may function to stabilize the immunological synapse. In this model, [STXBP6](/details-gene/29091) would modulate T-cell activation by regulating either cytokine secretion or the duration and avidity of the T-cell-APC interaction. **Proposed Key Experiment:** To test the first hypothesis regarding its role in inhibitory neurotransmission, a cell-type-specific knockout approach would be informative. A conditional knockout mouse model could be generated to delete [STXBP6](/details-gene/29091) specifically in cortical interneurons (e.g., using a Pvalb-Cre or Sst-Cre driver line). Brain slices from these mice could then be analyzed using whole-cell patch-clamp electrophysiology. An increase in the frequency or amplitude of spontaneous and miniature inhibitory postsynaptic currents (IPSCs) in postsynaptic pyramidal neurons would provide direct evidence that [STXBP6](/details-gene/29091) negatively regulates GABA release. **Therapeutic Potential:** The broad expression of [STXBP6](/details-gene/29091) in critical cell types like neurons and immune cells makes it a challenging systemic drug target due to the high risk of off-target effects. However, its role in regulating exocytosis makes it a mechanistically interesting protein. If its dysregulation is definitively linked to pathologies characterized by either excessive (e.g., epilepsy) or insufficient (e.g., certain immunodeficiencies) cellular secretion, then cell-type-specific delivery systems (e.g., AAVs with neuron-specific promoters) targeting [STXBP6](/details-gene/29091) expression or function could be explored. Inhibition of its function might be beneficial in conditions of neuronal hyperexcitability, whereas activation or overexpression could be a strategy for diseases involving impaired secretion.

Genular Protein ID: 3253204239

Symbol: STXB6_HUMAN

Name: Syntaxin-binding protein 6

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 12145319

Title: Amisyn, a novel syntaxin-binding protein that may regulate SNARE complex assembly.

PubMed ID: 12145319

DOI: 10.1074/jbc.m204929200

PubMed ID: 11042152

Title: Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.

PubMed ID: 11042152

DOI: 10.1101/gr.140200

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 12508121

Title: The DNA sequence and analysis of human chromosome 14.

PubMed ID: 12508121

DOI: 10.1038/nature01348

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

Sequence Information:

  • Length: 210
  • Mass: 23554
  • Checksum: 7C046A90D4C4B2D8
  • Sequence:
  • MSAKSAISKE IFAPLDERML GAVQVKRRTK KKIPFLATGG QGEYLTYICL SVTNKKPTQA 
    SITKVKQFEG STSFVRRSQW MLEQLRQVNG IDPNGDSAEF DLLFENAFDQ WVASTASEKC 
    TFFQILHHTC QRYLTDRKPE FINCQSKIMG GNSILHSAAD SVTSAVQKAS QALNERGERL 
    GRAEEKTEDL KNSAQQFAET AHKLAMKHKC