Details for: KCNA1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: granule cell (CL0000120)
Fold Change: 1.1015
Cell Significance Index: 12.5400 - Cell Name: L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (CL4023050)
Fold Change: 1.0690
Cell Significance Index: 14.2600 - Cell Name: stellate neuron (CL0000122)
Fold Change: 0.9299
Cell Significance Index: 10.5600 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.8160
Cell Significance Index: 23.2900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.7110
Cell Significance Index: 142.6300 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.7029
Cell Significance Index: 9.5900 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 0.6913
Cell Significance Index: 16.7500 - Cell Name: L6 corticothalamic-projecting glutamatergic cortical neuron (CL4023042)
Fold Change: 0.5919
Cell Significance Index: 6.5300 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.5085
Cell Significance Index: 34.2000 - Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
Fold Change: 0.2720
Cell Significance Index: 3.0200 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.1879
Cell Significance Index: 2.3300 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1452
Cell Significance Index: 100.4200 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: 0.1073
Cell Significance Index: 1.4300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0603
Cell Significance Index: 21.6300 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.0063
Cell Significance Index: 0.1000 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
Fold Change: 0.0046
Cell Significance Index: 0.0500 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 0.0011
Cell Significance Index: 0.0400 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.0065
Cell Significance Index: -0.0500 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0126
Cell Significance Index: -9.3200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0162
Cell Significance Index: -9.1500 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0195
Cell Significance Index: -0.6400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0232
Cell Significance Index: -6.6800 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0352
Cell Significance Index: -1.0100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0374
Cell Significance Index: -7.8800 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0522
Cell Significance Index: -7.1700 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0552
Cell Significance Index: -9.4200 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0625
Cell Significance Index: -8.0800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0801
Cell Significance Index: -1.7000 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0830
Cell Significance Index: -9.5100 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0902
Cell Significance Index: -3.1600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1084
Cell Significance Index: -8.0800 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1183
Cell Significance Index: -2.5900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1208
Cell Significance Index: -6.3400 - Cell Name: neuron (CL0000540)
Fold Change: -0.1245
Cell Significance Index: -1.1800 - Cell Name: neural cell (CL0002319)
Fold Change: -0.1260
Cell Significance Index: -1.4700 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.1264
Cell Significance Index: -1.8100 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.1275
Cell Significance Index: -2.7300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1276
Cell Significance Index: -7.8400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1282
Cell Significance Index: -7.2000 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.1349
Cell Significance Index: -6.2900 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.1360
Cell Significance Index: -2.7300 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1366
Cell Significance Index: -2.8600 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.1502
Cell Significance Index: -2.9700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1515
Cell Significance Index: -7.1200 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.1619
Cell Significance Index: -7.3400 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.1676
Cell Significance Index: -2.8900 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1762
Cell Significance Index: -3.0200 - Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
Fold Change: -0.1777
Cell Significance Index: -1.9400 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.1833
Cell Significance Index: -6.7300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.1879
Cell Significance Index: -5.2500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.1962
Cell Significance Index: -3.8300 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.2007
Cell Significance Index: -3.2200 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.2068
Cell Significance Index: -5.3100 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.2120
Cell Significance Index: -2.3100 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.2205
Cell Significance Index: -5.5000 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: -0.2217
Cell Significance Index: -2.9000 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: -0.2274
Cell Significance Index: -2.7200 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: -0.2301
Cell Significance Index: -3.1600 - Cell Name: cytotoxic T cell (CL0000910)
Fold Change: -0.2377
Cell Significance Index: -3.4700 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.2399
Cell Significance Index: -12.1200 - Cell Name: osteoclast (CL0000092)
Fold Change: -0.2400
Cell Significance Index: -2.4500 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: -0.2478
Cell Significance Index: -3.1400 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.2530
Cell Significance Index: -5.2800 - Cell Name: neuroplacodal cell (CL0000032)
Fold Change: -0.2623
Cell Significance Index: -3.2300 - Cell Name: retinal astrocyte (CL4033015)
Fold Change: -0.2677
Cell Significance Index: -2.6200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.2699
Cell Significance Index: -9.3800 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.2712
Cell Significance Index: -6.9100 - Cell Name: prostate gland microvascular endothelial cell (CL2000059)
Fold Change: -0.2729
Cell Significance Index: -1.9600 - Cell Name: pro-B cell (CL0000826)
Fold Change: -0.2744
Cell Significance Index: -2.9500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.2763
Cell Significance Index: -7.5200 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: -0.2764
Cell Significance Index: -2.6300 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: -0.2772
Cell Significance Index: -3.3600 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.2835
Cell Significance Index: -3.5400 - Cell Name: ependymal cell (CL0000065)
Fold Change: -0.2843
Cell Significance Index: -3.3500 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.2847
Cell Significance Index: -7.1100 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.2852
Cell Significance Index: -3.6000 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.2865
Cell Significance Index: -6.8700 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.2935
Cell Significance Index: -7.1600 - Cell Name: tendon cell (CL0000388)
Fold Change: -0.2942
Cell Significance Index: -4.0000 - Cell Name: non-classical monocyte (CL0000875)
Fold Change: -0.2981
Cell Significance Index: -3.3000 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.2999
Cell Significance Index: -6.4800 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.3045
Cell Significance Index: -3.3100 - Cell Name: T follicular helper cell (CL0002038)
Fold Change: -0.3089
Cell Significance Index: -3.2800 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: -0.3094
Cell Significance Index: -3.6400 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: -0.3099
Cell Significance Index: -3.9100 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.3104
Cell Significance Index: -7.9300 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: -0.3148
Cell Significance Index: -3.7200 - Cell Name: peg cell (CL4033014)
Fold Change: -0.3151
Cell Significance Index: -7.2800 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: -0.3177
Cell Significance Index: -5.4300 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.3226
Cell Significance Index: -8.0400 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.3237
Cell Significance Index: -9.5400 - Cell Name: myelocyte (CL0002193)
Fold Change: -0.3266
Cell Significance Index: -3.4900 - Cell Name: osteoblast (CL0000062)
Fold Change: -0.3360
Cell Significance Index: -3.2600 - Cell Name: immature B cell (CL0000816)
Fold Change: -0.3403
Cell Significance Index: -3.2200 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
Fold Change: -0.3425
Cell Significance Index: -6.8300 - Cell Name: macroglial cell (CL0000126)
Fold Change: -0.3455
Cell Significance Index: -4.0000 - Cell Name: promonocyte (CL0000559)
Fold Change: -0.3483
Cell Significance Index: -3.7200 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.3509
Cell Significance Index: -7.1400 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: -0.3515
Cell Significance Index: -4.8600 - Cell Name: common dendritic progenitor (CL0001029)
Fold Change: -0.3527
Cell Significance Index: -3.6700
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 663898923
Symbol: KCNA1_HUMAN
Name: Voltage-gated potassium channel subunit Kv1.1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 19912772
Title: Human potassium channel genes: molecular cloning and functional expression.
PubMed ID: 19912772
PubMed ID: 16541075
Title: The finished DNA sequence of human chromosome 12.
PubMed ID: 16541075
DOI: 10.1038/nature04569
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2128063
Title: Cloning and characterization of a cDNA encoding a human brain potassium channel.
PubMed ID: 2128063
DOI: 10.1042/bst0180891
PubMed ID: 11086297
Title: Subunit composition and novel localization of K+ channels in spinal cord.
PubMed ID: 11086297
DOI: 10.1002/1096-9861(20000101)429:1<166::aid-cne13>3.0.co;2-y
PubMed ID: 12907802
Title: Nervous system targets of RNA editing identified by comparative genomics.
PubMed ID: 12907802
PubMed ID: 15837928
Title: The human Kv1.1 channel is palmitoylated, modulating voltage sensing: Identification of a palmitoylation consensus sequence.
PubMed ID: 15837928
PubMed ID: 17917103
Title: Ionic channel function in action potential generation: current perspective.
PubMed ID: 17917103
PubMed ID: 19968958
Title: Potassium channel regulator KCNRG regulates surface expression of Shaker-type potassium channels.
PubMed ID: 19968958
PubMed ID: 21106501
Title: Nerve excitability studies characterize Kv1.1 fast potassium channel dysfunction in patients with episodic ataxia type 1.
PubMed ID: 21106501
DOI: 10.1093/brain/awq318
PubMed ID: 21483673
Title: Evidence for presence and functional effects of Kv1.1 channels in beta-cells: general survey and results from mceph/mceph mice.
PubMed ID: 21483673
PubMed ID: 23774215
Title: Potassium channel KCNA1 modulates oncogene-induced senescence and transformation.
PubMed ID: 23774215
PubMed ID: 23903368
Title: Ankyrin-3 is a novel binding partner of the voltage-gated potassium channel Kv1.1 implicated in renal magnesium handling.
PubMed ID: 23903368
DOI: 10.1038/ki.2013.280
PubMed ID: 7842011
Title: Episodic ataxia/myokymia syndrome is associated with point mutations in the human potassium channel gene, KCNA1.
PubMed ID: 7842011
DOI: 10.1038/ng1094-136
PubMed ID: 8541859
Title: Identification of two new KCNA1 mutations in episodic ataxia/myokymia families.
PubMed ID: 8541859
DOI: 10.1093/hmg/4.9.1671
PubMed ID: 8845167
Title: Episodic ataxia results from voltage-dependent potassium channels with altered functions.
PubMed ID: 8845167
PubMed ID: 8871592
Title: Episodic ataxia and myokymia syndrome: a new mutation of potassium channel gene Kv1.1.
PubMed ID: 8871592
PubMed ID: 9600245
Title: Three novel KCNA1 mutations in episodic ataxia type I families.
PubMed ID: 9600245
PubMed ID: 10355668
Title: A novel mutation in the human voltage-gated potassium channel gene (Kv1.1) associates with episodic ataxia type 1 and sometimes with partial epilepsy.
PubMed ID: 10355668
PubMed ID: 11026449
Title: Clinical, genetic, and expression studies of mutations in the potassium channel gene KCNA1 reveal new phenotypic variability.
PubMed ID: 11026449
DOI: 10.1002/1531-8249(200010)48:4<647::aid-ana12>3.3.co;2-h
PubMed ID: 11013453
Title: Identification of a novel missense mutation L329I in the episodic ataxia type 1 gene KCNA1 -- a challenging problem.
PubMed ID: 11013453
DOI: 10.1002/1098-1004(200010)16:4<374::aid-humu15>3.0.co;2-4
PubMed ID: 12077175
Title: Episodic ataxia type 1 mutations in the human Kv1.1 potassium channel alter hKvbeta 1-induced N-type inactivation.
PubMed ID: 12077175
PubMed ID: 15532032
Title: A novel mutation in KCNA1 causes episodic ataxia without myokymia.
PubMed ID: 15532032
DOI: 10.1002/humu.9295
PubMed ID: 17156368
Title: Episodic ataxia type 1 mutations in the KCNA1 gene impair the fast inactivation properties of the human potassium channels Kv1.4-1.1/Kvbeta1.1 and Kv1.4-1.1/Kvbeta1.2.
PubMed ID: 17156368
PubMed ID: 17136396
Title: Functional analysis of a novel potassium channel (KCNA1) mutation in hereditary myokymia.
PubMed ID: 17136396
PubMed ID: 19307729
Title: A missense mutation in the Kv1.1 voltage-gated potassium channel-encoding gene KCNA1 is linked to human autosomal dominant hypomagnesemia.
PubMed ID: 19307729
DOI: 10.1172/jci36948
PubMed ID: 19903818
Title: Functional analysis of the Kv1.1 N255D mutation associated with autosomal dominant hypomagnesemia.
PubMed ID: 19903818
PubMed ID: 27864847
Title: Diagnostic targeted resequencing in 349 patients with drug-resistant pediatric epilepsies identifies causative mutations in 30 different genes.
PubMed ID: 27864847
DOI: 10.1002/humu.23149
Sequence Information:
- Length: 495
- Mass: 56466
- Checksum: 0A1B1AB87BCDDEBA
- Sequence:
MTVMSGENVD EASAAPGHPQ DGSYPRQADH DDHECCERVV INISGLRFET QLKTLAQFPN TLLGNPKKRM RYFDPLRNEY FFDRNRPSFD AILYYYQSGG RLRRPVNVPL DMFSEEIKFY ELGEEAMEKF REDEGFIKEE ERPLPEKEYQ RQVWLLFEYP ESSGPARVIA IVSVMVILIS IVIFCLETLP ELKDDKDFTG TVHRIDNTTV IYNSNIFTDP FFIVETLCII WFSFELVVRF FACPSKTDFF KNIMNFIDIV AIIPYFITLG TEIAEQEGNQ KGEQATSLAI LRVIRLVRVF RIFKLSRHSK GLQILGQTLK ASMRELGLLI FFLFIGVILF SSAVYFAEAE EAESHFSSIP DAFWWAVVSM TTVGYGDMYP VTIGGKIVGS LCAIAGVLTI ALPVPVIVSN FNYFYHRETE GEEQAQLLHV SSPNLASDSD LSRRSSSTMS KSEYMEIEED MNNSIAHYRQ VNIRTANCTT ANQNCVNKSK LLTDV
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.