Details for: LCAT
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.59
Marker Score: 1158 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 1.12
Marker Score: 4335 - Cell Name: neuroendocrine cell (CL0000165)
Fold Change: 1.07
Marker Score: 417 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71813 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48038 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30407 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.97
Marker Score: 498 - Cell Name: hepatoblast (CL0005026)
Fold Change: 0.96
Marker Score: 3155 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.95
Marker Score: 451 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: 0.95
Marker Score: 4100 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2411 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.91
Marker Score: 2735 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.91
Marker Score: 5205 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.91
Marker Score: 364 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.88
Marker Score: 317 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5295 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 0.82
Marker Score: 4382 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.77
Marker Score: 1252 - Cell Name: brush cell (CL0002204)
Fold Change: 0.77
Marker Score: 700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.76
Marker Score: 350 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.75
Marker Score: 386 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.68
Marker Score: 2868 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.67
Marker Score: 4320 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.67
Marker Score: 172 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.62
Marker Score: 413 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.62
Marker Score: 474.5 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.62
Marker Score: 9690 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.6
Marker Score: 519.5 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.55
Marker Score: 442 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.53
Marker Score: 168 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 0.52
Marker Score: 340 - Cell Name: hepatocyte (CL0000182)
Fold Change: 0.48
Marker Score: 329 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.48
Marker Score: 544 - Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
Fold Change: 0.46
Marker Score: 493 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.45
Marker Score: 9602 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 0.45
Marker Score: 262 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.44
Marker Score: 2650 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 0.4
Marker Score: 503 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 0.4
Marker Score: 772 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.4
Marker Score: 6386 - Cell Name: type I pneumocyte (CL0002062)
Fold Change: 0.39
Marker Score: 465 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 0.38
Marker Score: 358 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 0.37
Marker Score: 151 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 0.37
Marker Score: 139 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 0.36
Marker Score: 415 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.35
Marker Score: 167 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.35
Marker Score: 145 - Cell Name: parietal epithelial cell (CL1000452)
Fold Change: 0.34
Marker Score: 125 - Cell Name: erythroblast (CL0000765)
Fold Change: 0.34
Marker Score: 211 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.33
Marker Score: 147 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: 0.33
Marker Score: 271 - Cell Name: contractile cell (CL0000183)
Fold Change: 0.32
Marker Score: 172 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.32
Marker Score: 10750 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.32
Marker Score: 132 - Cell Name: subcutaneous fat cell (CL0002521)
Fold Change: 0.31
Marker Score: 115 - Cell Name: cholangiocyte (CL1000488)
Fold Change: 0.3
Marker Score: 112 - Cell Name: inflammatory macrophage (CL0000863)
Fold Change: 0.29
Marker Score: 91 - Cell Name: fat cell (CL0000136)
Fold Change: 0.29
Marker Score: 161 - Cell Name: smooth muscle cell of prostate (CL1000487)
Fold Change: 0.29
Marker Score: 73 - Cell Name: skin fibroblast (CL0002620)
Fold Change: 0.27
Marker Score: 71 - Cell Name: endothelial cell (CL0000115)
Fold Change: 0.27
Marker Score: 245 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.27
Marker Score: 117 - Cell Name: pro-B cell (CL0000826)
Fold Change: 0.27
Marker Score: 258 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 0.26
Marker Score: 198 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.26
Marker Score: 536 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.26
Marker Score: 68 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 0.26
Marker Score: 1260 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.25
Marker Score: 169 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: 0.25
Marker Score: 219 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.24
Marker Score: 253 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 0.24
Marker Score: 262 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.24
Marker Score: 952 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 0.24
Marker Score: 117 - Cell Name: fibroblast of lung (CL0002553)
Fold Change: 0.24
Marker Score: 616 - Cell Name: multi-ciliated epithelial cell (CL0005012)
Fold Change: 0.23
Marker Score: 440 - Cell Name: epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.23
Marker Score: 102 - Cell Name: endothelial cell of periportal hepatic sinusoid (CL0019021)
Fold Change: 0.22
Marker Score: 61 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.22
Marker Score: 63 - Cell Name: basal cell (CL0000646)
Fold Change: 0.22
Marker Score: 285 - Cell Name: bronchial smooth muscle cell (CL0002598)
Fold Change: 0.22
Marker Score: 62 - Cell Name: kidney connecting tubule epithelial cell (CL1000768)
Fold Change: 0.22
Marker Score: 309 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: 0.22
Marker Score: 155 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.22
Marker Score: 139 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 0.21
Marker Score: 128 - Cell Name: fibroblast (CL0000057)
Fold Change: 0.21
Marker Score: 206 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.21
Marker Score: 72 - Cell Name: pericyte (CL0000669)
Fold Change: 0.21
Marker Score: 124 - Cell Name: Kupffer cell (CL0000091)
Fold Change: 0.21
Marker Score: 210 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 0.21
Marker Score: 167 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.21
Marker Score: 125 - Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
Fold Change: 0.21
Marker Score: 211 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 0.21
Marker Score: 4618 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.2
Marker Score: 186 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 0.2
Marker Score: 382 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: 0.2
Marker Score: 707 - Cell Name: ependymal cell (CL0000065)
Fold Change: 0.2
Marker Score: 69 - Cell Name: preosteoblast (CL0007010)
Fold Change: 0.2
Marker Score: 56 - Cell Name: retina horizontal cell (CL0000745)
Fold Change: 0.19
Marker Score: 186 - Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
Fold Change: 0.19
Marker Score: 204 - Cell Name: podocyte (CL0000653)
Fold Change: 0.19
Marker Score: 70
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Other Information
Genular Protein ID: 2525910493
Symbol: LCAT_HUMAN
Name: Phosphatidylcholine-sterol acyltransferase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 3797244
Title: Human lecithin-cholesterol acyltransferase gene: complete gene sequence and sites of expression.
PubMed ID: 3797244
PubMed ID: 3458198
Title: Cloning and expression of human lecithin-cholesterol acyltransferase cDNA.
PubMed ID: 3458198
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2823898
Title: The isolation and characterisation of cDNA and genomic clones for human lecithin: cholesterol acyltransferase.
PubMed ID: 2823898
PubMed ID: 2823801
Title: The isolation and characterisation of a cDNA clone for human lecithin:cholesterol acyl transferase and its use to analyse the genes in patients with LCAT deficiency and fish eye disease.
PubMed ID: 2823801
PubMed ID: 2880847
Title: Lecithin:cholesterol acyltransferase. Functional regions and a structural model of the enzyme.
PubMed ID: 2880847
PubMed ID: 8016111
Title: Hydrolysis and transesterification of platelet-activating factor by lecithin-cholesterol acyltransferase.
PubMed ID: 8016111
PubMed ID: 7613477
Title: Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion.
PubMed ID: 7613477
PubMed ID: 8820107
Title: Comparative studies on the substrate specificity of lecithin:cholesterol acyltransferase towards the molecular species of phosphatidylcholine in the plasma of 14 vertebrates.
PubMed ID: 8820107
PubMed ID: 10222237
Title: Secretion of lecithin:cholesterol acyltransferase by brain neuroglial cell lines.
PubMed ID: 10222237
PubMed ID: 10329423
Title: Binding affinity and reactivity of lecithin cholesterol acyltransferase with native lipoproteins.
PubMed ID: 10329423
PubMed ID: 10722751
Title: Formation of spherical, reconstituted high density lipoproteins containing both apolipoproteins A-I and A-II is mediated by lecithin:cholesterol acyltransferase.
PubMed ID: 10722751
PubMed ID: 12354767
Title: Serum lysophosphatidic acid is produced through diverse phospholipase pathways.
PubMed ID: 12354767
PubMed ID: 14636062
Title: Negative charge at amino acid 149 is the molecular determinant for substrate specificity of lecithin: cholesterol acyltransferase for phosphatidylcholine containing 20-carbon sn-2 fatty acyl chains.
PubMed ID: 14636062
DOI: 10.1021/bi035460u
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 17950106
Title: Relationship of endogenous hyperleptinemia to serum paraoxonase 1, cholesteryl ester transfer protein, and lecithin cholesterol acyltransferase in obese individuals.
PubMed ID: 17950106
PubMed ID: 19065001
Title: LCAT synthesized by primary astrocytes esterifies cholesterol on glia-derived lipoproteins.
PubMed ID: 19065001
PubMed ID: 24620755
Title: The enzyme lecithin-cholesterol acyltransferase esterifies cerebrosterol and limits the toxic effect of this oxysterol on SH-SY5Y cells.
PubMed ID: 24620755
DOI: 10.1111/jnc.12713
PubMed ID: 26195816
Title: The high resolution crystal structure of human LCAT.
PubMed ID: 26195816
DOI: 10.1194/jlr.m059873
PubMed ID: 25727495
Title: Structure and function of lysosomal phospholipase A2 and lecithin:cholesterol acyltransferase.
PubMed ID: 25727495
DOI: 10.1038/ncomms7250
PubMed ID: 1571050
Title: An amino acid exchange in exon I of the human lecithin: cholesterol acyltransferase (LCAT) gene is associated with fish eye disease.
PubMed ID: 1571050
PubMed ID: 1737840
Title: Two different allelic mutations in the lecithin-cholesterol acyltransferase gene associated with the fish eye syndrome. Lecithin-cholesterol acyltransferase (Thr123-->Ile) and lecithin-cholesterol acyltransferase (Thr347-->Met).
PubMed ID: 1737840
DOI: 10.1172/jci115612
PubMed ID: 2370048
Title: Lecithin cholesterol acyl transferase deficiency: molecular analysis of a mutated allele.
PubMed ID: 2370048
DOI: 10.1007/bf00193195
PubMed ID: 1681161
Title: Differential phenotypic expression by three mutant alleles in familial lecithin:cholesterol acyltransferase deficiency.
PubMed ID: 1681161
PubMed ID: 1516702
Title: The genetic defect of the original Norwegian lecithin:cholesterol acyltransferase deficiency families.
PubMed ID: 1516702
PubMed ID: 1859405
Title: Lecithin-cholesterol acyltransferase (LCAT) deficiency with a missense mutation in exon 6 of the LCAT gene.
PubMed ID: 1859405
PubMed ID: 8432868
Title: Genetic and phenotypic heterogeneity in familial lecithin: cholesterol acyltransferase (LCAT) deficiency. Six newly identified defective alleles further contribute to the structural heterogeneity in this disease.
PubMed ID: 8432868
DOI: 10.1172/jci116248
PubMed ID: 8318557
Title: Lecithin:cholesterol acyltransferase deficiency: identification of a causative gene mutation and a co-inherited protein polymorphism.
PubMed ID: 8318557
PubMed ID: 7607641
Title: A single G to A nucleotide transition in exon IV of the lecithin: cholesterol acyltransferase (LCAT) gene results in an Arg140 to His substitution and causes LCAT-deficiency.
PubMed ID: 7607641
DOI: 10.1007/bf00214196
PubMed ID: 7711728
Title: Deficiency of lecithin:cholesterol acyltransferase due to compound heterozygosity of two novel mutations (Gly33Arg and 30 bp ins) in the LCAT gene.
PubMed ID: 7711728
DOI: 10.1093/hmg/4.1.143
PubMed ID: 8620346
Title: Two novel molecular defects in the LCAT gene are associated with fish eye disease.
PubMed ID: 8620346
PubMed ID: 8807342
Title: Complete deficiency of plasma lecithin-cholesterol acyltransferase (LCAT) activity due to a novel homozygous mutation (Gly-30-Ser) in the LCAT gene.
PubMed ID: 8807342
DOI: 10.1002/(sici)1098-1004(1996)8:1<79::aid-humu13>3.0.co;2-o
PubMed ID: 9007616
Title: A novel missense mutation (Asn5-->Ile) in lecithin: cholesterol acyltransferase (LCAT) gene in a Japanese patient with LCAT deficiency.
PubMed ID: 9007616
DOI: 10.1007/bf02602958
PubMed ID: 9261271
Title: Molecular basis of fish-eye disease in a patient from Spain. Characterization of a novel mutation in the LCAT gene and lipid analysis of the cornea.
PubMed ID: 9261271
PubMed ID: 9741700
Title: Transmission of two novel mutations in a pedigree with familial lecithin:cholesterol acyltransferase deficiency: structure-function relationships and studies in a compound heterozygous proband.
PubMed ID: 9741700
PubMed ID: 11423760
Title: Hypocomplementemic type II membranoproliferative glomerulonephritis in a male patient with familial lecithin-cholesterol acyltransferase deficiency due to two different allelic mutations.
PubMed ID: 11423760
DOI: 10.1159/000046001
PubMed ID: 12957688
Title: A novel LCAT mutation (Phe382-->Val) in a kindred with familial LCAT deficiency and defective apolipoprotein B-100.
PubMed ID: 12957688
PubMed ID: 12966036
Title: Association of extreme blood lipid profile phenotypic variation with 11 reverse cholesterol transport genes and 10 non-genetic cardiovascular disease risk factors.
PubMed ID: 12966036
DOI: 10.1093/hmg/ddg314
PubMed ID: 15994445
Title: The molecular basis of lecithin:cholesterol acyltransferase deficiency syndromes: a comprehensive study of molecular and biochemical findings in 13 unrelated Italian families.
PubMed ID: 15994445
PubMed ID: 16051254
Title: Familial lecithin-cholesterol acyltransferase deficiency: biochemical characteristics and molecular analysis of a new LCAT mutation in a Polish family.
PubMed ID: 16051254
PubMed ID: 16216249
Title: Compound heterozygosity (G71R/R140H) in the lecithin:cholesterol acyltransferase (LCAT) gene results in an intermediate phenotype between LCAT-deficiency and fish-eye disease.
PubMed ID: 16216249
PubMed ID: 16874701
Title: LCAT deficiency: molecular and phenotypic characterization of an Italian family.
PubMed ID: 16874701
PubMed ID: 21901787
Title: High prevalence of mutations in LCAT in patients with low HDL cholesterol levels in The Netherlands: identification and characterization of eight novel mutations.
PubMed ID: 21901787
DOI: 10.1002/humu.21578
Sequence Information:
- Length: 440
- Mass: 49578
- Checksum: B315EF118AA7A378
- Sequence:
MGPPGSPWQW VTLLLGLLLP PAAPFWLLNV LFPPHTTPKA ELSNHTRPVI LVPGCLGNQL EAKLDKPDVV NWMCYRKTED FFTIWLDLNM FLPLGVDCWI DNTRVVYNRS SGLVSNAPGV QIRVPGFGKT YSVEYLDSSK LAGYLHTLVQ NLVNNGYVRD ETVRAAPYDW RLEPGQQEEY YRKLAGLVEE MHAAYGKPVF LIGHSLGCLH LLYFLLRQPQ AWKDRFIDGF ISLGAPWGGS IKPMLVLASG DNQGIPIMSS IKLKEEQRIT TTSPWMFPSR MAWPEDHVFI STPSFNYTGR DFQRFFADLH FEEGWYMWLQ SRDLLAGLPA PGVEVYCLYG VGLPTPRTYI YDHGFPYTDP VGVLYEDGDD TVATRSTELC GLWQGRQPQP VHLLPLHGIQ HLNMVFSNLT LEHINAILLG AYRQGPPASP TASPEPPPPE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.