Details for: LCAT
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 52.0749
Cell Significance Index: -8.1000 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 33.6693
Cell Significance Index: -8.5400 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 17.0507
Cell Significance Index: -8.0500 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 6.9102
Cell Significance Index: -8.5200 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 2.4944
Cell Significance Index: 152.9300 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 2.1769
Cell Significance Index: -8.5900 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: 0.6730
Cell Significance Index: 11.0900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.6380
Cell Significance Index: 17.8300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.6192
Cell Significance Index: 122.8800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.5526
Cell Significance Index: 7.5400 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.5368
Cell Significance Index: 102.1700 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5302
Cell Significance Index: 52.4500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.5161
Cell Significance Index: 16.5300 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.4345
Cell Significance Index: 392.2900 - Cell Name: myometrial cell (CL0002366)
Fold Change: 0.3091
Cell Significance Index: 3.5600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.2099
Cell Significance Index: 16.1100 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.1786
Cell Significance Index: 5.1200 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.1508
Cell Significance Index: 2.5400 - Cell Name: decidual cell (CL2000002)
Fold Change: 0.1487
Cell Significance Index: 2.3900 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.1409
Cell Significance Index: 2.7500 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 0.1363
Cell Significance Index: 1.9600 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.1319
Cell Significance Index: 3.5900 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1276
Cell Significance Index: 20.7500 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.1272
Cell Significance Index: 13.8400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.0844
Cell Significance Index: 9.8400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.0805
Cell Significance Index: 4.1800 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: 0.0713
Cell Significance Index: 3.6000 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0698
Cell Significance Index: 2.0100 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0681
Cell Significance Index: 8.7300 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0676
Cell Significance Index: 9.2800 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.0532
Cell Significance Index: 0.8900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0521
Cell Significance Index: 9.4000 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0518
Cell Significance Index: 22.9200 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 0.0476
Cell Significance Index: 0.7000 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.0411
Cell Significance Index: 2.8400 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.0310
Cell Significance Index: 2.1900 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0300
Cell Significance Index: 0.8000 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.0258
Cell Significance Index: 0.3700 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0149
Cell Significance Index: 8.1600 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0079
Cell Significance Index: 0.9700 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0056
Cell Significance Index: 10.4600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0054
Cell Significance Index: 0.1900 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0047
Cell Significance Index: 7.1700 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0020
Cell Significance Index: 3.6600 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: -0.0021
Cell Significance Index: -0.0300 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0030
Cell Significance Index: -1.9100 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0034
Cell Significance Index: -4.6300 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0052
Cell Significance Index: -2.3600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0083
Cell Significance Index: -6.2500 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.0084
Cell Significance Index: -0.2100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0086
Cell Significance Index: -6.2800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0094
Cell Significance Index: -1.3700 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0123
Cell Significance Index: -9.1400 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0136
Cell Significance Index: -8.4800 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0148
Cell Significance Index: -0.3200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0157
Cell Significance Index: -5.6200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0158
Cell Significance Index: -8.8900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0172
Cell Significance Index: -0.7800 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0190
Cell Significance Index: -3.2400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0220
Cell Significance Index: -6.3300 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0221
Cell Significance Index: -1.0300 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0268
Cell Significance Index: -3.0700 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0271
Cell Significance Index: -2.7700 - Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: -0.0300
Cell Significance Index: -0.4200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0328
Cell Significance Index: -6.5900 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0335
Cell Significance Index: -0.8600 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.0423
Cell Significance Index: -0.9000 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0432
Cell Significance Index: -5.0900 - Cell Name: subcutaneous adipocyte (CL0002521)
Fold Change: -0.0436
Cell Significance Index: -0.1900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0437
Cell Significance Index: -9.2000 - Cell Name: intrahepatic cholangiocyte (CL0002538)
Fold Change: -0.0504
Cell Significance Index: -0.1900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0516
Cell Significance Index: -6.6700 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0582
Cell Significance Index: -1.5600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0690
Cell Significance Index: -7.1800 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0717
Cell Significance Index: -3.3700 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0825
Cell Significance Index: -5.3300 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0832
Cell Significance Index: -1.4000 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0843
Cell Significance Index: -6.2800 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0929
Cell Significance Index: -7.3600 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.0942
Cell Significance Index: -1.3900 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: -0.1064
Cell Significance Index: -1.8400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1151
Cell Significance Index: -6.4600 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1181
Cell Significance Index: -7.2600 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: -0.1207
Cell Significance Index: -1.2500 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1209
Cell Significance Index: -8.1300 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.1215
Cell Significance Index: -2.5200 - Cell Name: mature astrocyte (CL0002627)
Fold Change: -0.1332
Cell Significance Index: -1.4800 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.1334
Cell Significance Index: -2.8400 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.1570
Cell Significance Index: -2.4900 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1629
Cell Significance Index: -3.4100 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: -0.1667
Cell Significance Index: -1.4000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1695
Cell Significance Index: -8.9000 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: -0.1702
Cell Significance Index: -0.9800 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1717
Cell Significance Index: -5.9700 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: -0.2018
Cell Significance Index: -2.9300 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2069
Cell Significance Index: -9.1500 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: -0.2123
Cell Significance Index: -2.9800 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: -0.2184
Cell Significance Index: -2.2800 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2206
Cell Significance Index: -5.8000 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.2301
Cell Significance Index: -3.2700
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2525910493
Symbol: LCAT_HUMAN
Name: Phosphatidylcholine-sterol acyltransferase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 3797244
Title: Human lecithin-cholesterol acyltransferase gene: complete gene sequence and sites of expression.
PubMed ID: 3797244
PubMed ID: 3458198
Title: Cloning and expression of human lecithin-cholesterol acyltransferase cDNA.
PubMed ID: 3458198
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2823898
Title: The isolation and characterisation of cDNA and genomic clones for human lecithin: cholesterol acyltransferase.
PubMed ID: 2823898
PubMed ID: 2823801
Title: The isolation and characterisation of a cDNA clone for human lecithin:cholesterol acyl transferase and its use to analyse the genes in patients with LCAT deficiency and fish eye disease.
PubMed ID: 2823801
PubMed ID: 2880847
Title: Lecithin:cholesterol acyltransferase. Functional regions and a structural model of the enzyme.
PubMed ID: 2880847
PubMed ID: 8016111
Title: Hydrolysis and transesterification of platelet-activating factor by lecithin-cholesterol acyltransferase.
PubMed ID: 8016111
PubMed ID: 7613477
Title: Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion.
PubMed ID: 7613477
PubMed ID: 8820107
Title: Comparative studies on the substrate specificity of lecithin:cholesterol acyltransferase towards the molecular species of phosphatidylcholine in the plasma of 14 vertebrates.
PubMed ID: 8820107
PubMed ID: 10222237
Title: Secretion of lecithin:cholesterol acyltransferase by brain neuroglial cell lines.
PubMed ID: 10222237
PubMed ID: 10329423
Title: Binding affinity and reactivity of lecithin cholesterol acyltransferase with native lipoproteins.
PubMed ID: 10329423
PubMed ID: 10722751
Title: Formation of spherical, reconstituted high density lipoproteins containing both apolipoproteins A-I and A-II is mediated by lecithin:cholesterol acyltransferase.
PubMed ID: 10722751
PubMed ID: 12354767
Title: Serum lysophosphatidic acid is produced through diverse phospholipase pathways.
PubMed ID: 12354767
PubMed ID: 14636062
Title: Negative charge at amino acid 149 is the molecular determinant for substrate specificity of lecithin: cholesterol acyltransferase for phosphatidylcholine containing 20-carbon sn-2 fatty acyl chains.
PubMed ID: 14636062
DOI: 10.1021/bi035460u
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 17950106
Title: Relationship of endogenous hyperleptinemia to serum paraoxonase 1, cholesteryl ester transfer protein, and lecithin cholesterol acyltransferase in obese individuals.
PubMed ID: 17950106
PubMed ID: 19065001
Title: LCAT synthesized by primary astrocytes esterifies cholesterol on glia-derived lipoproteins.
PubMed ID: 19065001
PubMed ID: 24620755
Title: The enzyme lecithin-cholesterol acyltransferase esterifies cerebrosterol and limits the toxic effect of this oxysterol on SH-SY5Y cells.
PubMed ID: 24620755
DOI: 10.1111/jnc.12713
PubMed ID: 26195816
Title: The high resolution crystal structure of human LCAT.
PubMed ID: 26195816
DOI: 10.1194/jlr.m059873
PubMed ID: 25727495
Title: Structure and function of lysosomal phospholipase A2 and lecithin:cholesterol acyltransferase.
PubMed ID: 25727495
DOI: 10.1038/ncomms7250
PubMed ID: 1571050
Title: An amino acid exchange in exon I of the human lecithin: cholesterol acyltransferase (LCAT) gene is associated with fish eye disease.
PubMed ID: 1571050
PubMed ID: 1737840
Title: Two different allelic mutations in the lecithin-cholesterol acyltransferase gene associated with the fish eye syndrome. Lecithin-cholesterol acyltransferase (Thr123-->Ile) and lecithin-cholesterol acyltransferase (Thr347-->Met).
PubMed ID: 1737840
DOI: 10.1172/jci115612
PubMed ID: 2370048
Title: Lecithin cholesterol acyl transferase deficiency: molecular analysis of a mutated allele.
PubMed ID: 2370048
DOI: 10.1007/bf00193195
PubMed ID: 1681161
Title: Differential phenotypic expression by three mutant alleles in familial lecithin:cholesterol acyltransferase deficiency.
PubMed ID: 1681161
PubMed ID: 1516702
Title: The genetic defect of the original Norwegian lecithin:cholesterol acyltransferase deficiency families.
PubMed ID: 1516702
PubMed ID: 1859405
Title: Lecithin-cholesterol acyltransferase (LCAT) deficiency with a missense mutation in exon 6 of the LCAT gene.
PubMed ID: 1859405
PubMed ID: 8432868
Title: Genetic and phenotypic heterogeneity in familial lecithin: cholesterol acyltransferase (LCAT) deficiency. Six newly identified defective alleles further contribute to the structural heterogeneity in this disease.
PubMed ID: 8432868
DOI: 10.1172/jci116248
PubMed ID: 8318557
Title: Lecithin:cholesterol acyltransferase deficiency: identification of a causative gene mutation and a co-inherited protein polymorphism.
PubMed ID: 8318557
PubMed ID: 7607641
Title: A single G to A nucleotide transition in exon IV of the lecithin: cholesterol acyltransferase (LCAT) gene results in an Arg140 to His substitution and causes LCAT-deficiency.
PubMed ID: 7607641
DOI: 10.1007/bf00214196
PubMed ID: 7711728
Title: Deficiency of lecithin:cholesterol acyltransferase due to compound heterozygosity of two novel mutations (Gly33Arg and 30 bp ins) in the LCAT gene.
PubMed ID: 7711728
DOI: 10.1093/hmg/4.1.143
PubMed ID: 8620346
Title: Two novel molecular defects in the LCAT gene are associated with fish eye disease.
PubMed ID: 8620346
PubMed ID: 8807342
Title: Complete deficiency of plasma lecithin-cholesterol acyltransferase (LCAT) activity due to a novel homozygous mutation (Gly-30-Ser) in the LCAT gene.
PubMed ID: 8807342
DOI: 10.1002/(sici)1098-1004(1996)8:1<79::aid-humu13>3.0.co;2-o
PubMed ID: 9007616
Title: A novel missense mutation (Asn5-->Ile) in lecithin: cholesterol acyltransferase (LCAT) gene in a Japanese patient with LCAT deficiency.
PubMed ID: 9007616
DOI: 10.1007/bf02602958
PubMed ID: 9261271
Title: Molecular basis of fish-eye disease in a patient from Spain. Characterization of a novel mutation in the LCAT gene and lipid analysis of the cornea.
PubMed ID: 9261271
PubMed ID: 9741700
Title: Transmission of two novel mutations in a pedigree with familial lecithin:cholesterol acyltransferase deficiency: structure-function relationships and studies in a compound heterozygous proband.
PubMed ID: 9741700
PubMed ID: 11423760
Title: Hypocomplementemic type II membranoproliferative glomerulonephritis in a male patient with familial lecithin-cholesterol acyltransferase deficiency due to two different allelic mutations.
PubMed ID: 11423760
DOI: 10.1159/000046001
PubMed ID: 12957688
Title: A novel LCAT mutation (Phe382-->Val) in a kindred with familial LCAT deficiency and defective apolipoprotein B-100.
PubMed ID: 12957688
PubMed ID: 12966036
Title: Association of extreme blood lipid profile phenotypic variation with 11 reverse cholesterol transport genes and 10 non-genetic cardiovascular disease risk factors.
PubMed ID: 12966036
DOI: 10.1093/hmg/ddg314
PubMed ID: 15994445
Title: The molecular basis of lecithin:cholesterol acyltransferase deficiency syndromes: a comprehensive study of molecular and biochemical findings in 13 unrelated Italian families.
PubMed ID: 15994445
PubMed ID: 16051254
Title: Familial lecithin-cholesterol acyltransferase deficiency: biochemical characteristics and molecular analysis of a new LCAT mutation in a Polish family.
PubMed ID: 16051254
PubMed ID: 16216249
Title: Compound heterozygosity (G71R/R140H) in the lecithin:cholesterol acyltransferase (LCAT) gene results in an intermediate phenotype between LCAT-deficiency and fish-eye disease.
PubMed ID: 16216249
PubMed ID: 16874701
Title: LCAT deficiency: molecular and phenotypic characterization of an Italian family.
PubMed ID: 16874701
PubMed ID: 21901787
Title: High prevalence of mutations in LCAT in patients with low HDL cholesterol levels in The Netherlands: identification and characterization of eight novel mutations.
PubMed ID: 21901787
DOI: 10.1002/humu.21578
Sequence Information:
- Length: 440
- Mass: 49578
- Checksum: B315EF118AA7A378
- Sequence:
MGPPGSPWQW VTLLLGLLLP PAAPFWLLNV LFPPHTTPKA ELSNHTRPVI LVPGCLGNQL EAKLDKPDVV NWMCYRKTED FFTIWLDLNM FLPLGVDCWI DNTRVVYNRS SGLVSNAPGV QIRVPGFGKT YSVEYLDSSK LAGYLHTLVQ NLVNNGYVRD ETVRAAPYDW RLEPGQQEEY YRKLAGLVEE MHAAYGKPVF LIGHSLGCLH LLYFLLRQPQ AWKDRFIDGF ISLGAPWGGS IKPMLVLASG DNQGIPIMSS IKLKEEQRIT TTSPWMFPSR MAWPEDHVFI STPSFNYTGR DFQRFFADLH FEEGWYMWLQ SRDLLAGLPA PGVEVYCLYG VGLPTPRTYI YDHGFPYTDP VGVLYEDGDD TVATRSTELC GLWQGRQPQP VHLLPLHGIQ HLNMVFSNLT LEHINAILLG AYRQGPPASP TASPEPPPPE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.