Details for: LETM1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 128.1299
Cell Significance Index: -19.9300 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 87.2091
Cell Significance Index: -22.1200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 51.0760
Cell Significance Index: -20.7500 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 46.6771
Cell Significance Index: -24.0100 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 21.7650
Cell Significance Index: -20.7800 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 19.2545
Cell Significance Index: -23.7400 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 8.5260
Cell Significance Index: -22.8400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 6.1961
Cell Significance Index: -24.4500 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 6.0330
Cell Significance Index: -18.5300 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 5.2454
Cell Significance Index: -11.4800 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 1.4001
Cell Significance Index: 38.1100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.0760
Cell Significance Index: 64.6000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.8926
Cell Significance Index: 97.0900 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.7731
Cell Significance Index: 90.1000 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.7725
Cell Significance Index: 16.7400 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.7085
Cell Significance Index: 115.2300 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.7010
Cell Significance Index: 31.7800 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.6721
Cell Significance Index: 19.3700 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.6546
Cell Significance Index: 591.0100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.6541
Cell Significance Index: 131.2100 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 0.6427
Cell Significance Index: 9.6300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.5918
Cell Significance Index: 16.5400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5329
Cell Significance Index: 27.6800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.5223
Cell Significance Index: 38.9300 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4673
Cell Significance Index: 32.3200 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.4520
Cell Significance Index: 29.1600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.4497
Cell Significance Index: 81.0700 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.4296
Cell Significance Index: 85.2500 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.4283
Cell Significance Index: 58.8200 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.4193
Cell Significance Index: 54.1800 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.3793
Cell Significance Index: 23.9100 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.3785
Cell Significance Index: 46.5400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.2965
Cell Significance Index: 106.3500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.2826
Cell Significance Index: 124.9500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.2479
Cell Significance Index: 11.6500 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.2171
Cell Significance Index: 10.1200 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.2043
Cell Significance Index: 14.4500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.1821
Cell Significance Index: 5.2200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.1781
Cell Significance Index: 13.6700 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1628
Cell Significance Index: 88.9100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1386
Cell Significance Index: 95.8500 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0920
Cell Significance Index: 1.9600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0766
Cell Significance Index: 7.5800 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0545
Cell Significance Index: 6.9900 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: 0.0437
Cell Significance Index: 0.2900 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0305
Cell Significance Index: 5.8000 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0298
Cell Significance Index: 0.5100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.0293
Cell Significance Index: 3.4600 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0230
Cell Significance Index: 3.9400 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0136
Cell Significance Index: 9.9800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0091
Cell Significance Index: 17.1800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0049
Cell Significance Index: 7.4800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0004
Cell Significance Index: -0.8100 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0059
Cell Significance Index: -3.7300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0091
Cell Significance Index: -12.3800 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0107
Cell Significance Index: -8.1100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0271
Cell Significance Index: -1.8200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0292
Cell Significance Index: -13.2500 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0292
Cell Significance Index: -21.6000 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0398
Cell Significance Index: -1.7600 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0408
Cell Significance Index: -2.5100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0415
Cell Significance Index: -23.3900 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0426
Cell Significance Index: -4.3500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0487
Cell Significance Index: -30.3900 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0504
Cell Significance Index: -1.7700 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0520
Cell Significance Index: -1.9700 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0634
Cell Significance Index: -18.2300 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0669
Cell Significance Index: -1.7900 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0994
Cell Significance Index: -14.4500 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1097
Cell Significance Index: -2.9400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1159
Cell Significance Index: -1.9400 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1160
Cell Significance Index: -13.3000 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.1209
Cell Significance Index: -1.6500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1293
Cell Significance Index: -27.2300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.1334
Cell Significance Index: -3.4300 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.1376
Cell Significance Index: -1.6400 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1413
Cell Significance Index: -7.4200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1781
Cell Significance Index: -6.1900 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1936
Cell Significance Index: -4.2400 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2140
Cell Significance Index: -6.8600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2170
Cell Significance Index: -22.6000 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.2181
Cell Significance Index: -11.3600 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.2325
Cell Significance Index: -5.9400 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.2373
Cell Significance Index: -2.1900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2395
Cell Significance Index: -18.9700 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.2400
Cell Significance Index: -13.4700 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2808
Cell Significance Index: -7.0200 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.3452
Cell Significance Index: -21.1700 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.3500
Cell Significance Index: -10.2800 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.3683
Cell Significance Index: -5.5500 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.3977
Cell Significance Index: -11.3500 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.4039
Cell Significance Index: -5.7500 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.4067
Cell Significance Index: -10.8800 - Cell Name: peg cell (CL4033014)
Fold Change: -0.4099
Cell Significance Index: -9.4700 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.4113
Cell Significance Index: -8.6100 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.4286
Cell Significance Index: -11.2700 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.4308
Cell Significance Index: -6.3600 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.4895
Cell Significance Index: -15.5900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.4957
Cell Significance Index: -16.2300 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.4958
Cell Significance Index: -18.2000
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2565376657
Symbol: LETM1_HUMAN
Name: Leucine zipper-EF-hand-containing transmembrane protein 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10486213
Title: LETM1, a novel gene encoding a putative EF-hand Ca(2+)-binding protein, flanks the Wolf-Hirschhorn syndrome (WHS) critical region and is deleted in most WHS patients.
PubMed ID: 10486213
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14706454
Title: LETM1, a gene deleted in Wolf-Hirschhorn syndrome, encodes an evolutionarily conserved mitochondrial protein.
PubMed ID: 14706454
PubMed ID: 15138253
Title: The LETM1/YOL027 gene family encodes a factor of the mitochondrial K+ homeostasis with a potential role in the Wolf-Hirschhorn syndrome.
PubMed ID: 15138253
PubMed ID: 18628306
Title: Characterization of the mitochondrial protein LETM1, which maintains the mitochondrial tubular shapes and interacts with the AAA-ATPase BCS1L.
PubMed ID: 18628306
DOI: 10.1242/jcs.026625
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 19797662
Title: Genome-wide RNAi screen identifies Letm1 as a mitochondrial Ca2+/H+ antiporter.
PubMed ID: 19797662
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 24898248
Title: NCLX protein, but not LETM1, mediates mitochondrial Ca2+ extrusion, thereby limiting Ca2+-induced NAD(P)H production and modulating matrix redox state.
PubMed ID: 24898248
PubMed ID: 24344246
Title: Functional reconstitution of the mitochondrial Ca2+/H+ antiporter Letm1.
PubMed ID: 24344246
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 29123128
Title: PINK1-mediated phosphorylation of LETM1 regulates mitochondrial calcium transport and protects neurons against mitochondrial stress.
PubMed ID: 29123128
PubMed ID: 32139798
Title: The mitochondrial inner membrane protein LETM1 modulates cristae organization through its LETM domain.
PubMed ID: 32139798
PubMed ID: 36321428
Title: TMBIM5 is the Ca2+ /H+ antiporter of mammalian mitochondria.
PubMed ID: 36321428
PubMed ID: 36055214
Title: Bi-allelic LETM1 variants perturb mitochondrial ion homeostasis leading to a clinical spectrum with predominant nervous system involvement.
PubMed ID: 36055214
Sequence Information:
- Length: 739
- Mass: 83354
- Checksum: 942E9138F299D94F
- Sequence:
MASILLRSCR GRAPARLPPP PRYTVPRGSP GDPAHLSCAS TLGLRNCLNV PFGCCTPIHP VYTSSRGDHL GCWALRPECL RIVSRAPWTS TSVGFVAVGP QCLPVRGWHS SRPVRDDSVV EKSLKSLKDK NKKLEEGGPV YSPPAEVVVK KSLGQRVLDE LKHYYHGFRL LWIDTKIAAR MLWRILNGHS LTRRERRQFL RICADLFRLV PFLVFVVVPF MEFLLPVAVK LFPNMLPSTF ETQSLKEERL KKELRVKLEL AKFLQDTIEE MALKNKAAKG SATKDFSVFF QKIRETGERP SNEEIMRFSK LFEDELTLDN LTRPQLVALC KLLELQSIGT NNFLRFQLTM RLRSIKADDK LIAEEGVDSL NVKELQAACR ARGMRALGVT EDRLRGQLKQ WLDLHLHQEI PTSLLILSRA MYLPDTLSPA DQLKSTLQTL PEIVAKEAQV KVAEVEGEQV DNKAKLEATL QEEAAIQQEH REKELQKRSE VAKDFEPERV VAAPQRPGTE PQPEMPDTVL QSETLKDTAP VLEGLKEEEI TKEEIDILSD ACSKLQEQKK SLTKEKEELE LLKEDVQDYS EDLQEIKKEL SKTGEEKYVE ESKASKRLTK RVQQMIGQID GLISQLEMDQ QAGKLAPANG MPTGENVISV AELINAMKQV KHIPESKLTS LAAALDENKD GKVNIDDLVK VIELVDKEDV HISTSQVAEI VATLEKEEKV EEKEKAKEKA EKEVAEVKS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.