Details for: COL5A3
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: 5.6510
Cell Significance Index: 79.0200 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 1.3193
Cell Significance Index: 14.6600 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.9138
Cell Significance Index: 15.8000 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.6686
Cell Significance Index: 13.0500 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.5056
Cell Significance Index: 7.2600 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.4486
Cell Significance Index: 57.5100 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.3464
Cell Significance Index: 9.9300 - Cell Name: subcutaneous adipocyte (CL0002521)
Fold Change: 0.3285
Cell Significance Index: 1.4300 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.2671
Cell Significance Index: 6.6600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.2191
Cell Significance Index: 43.9500 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.1817
Cell Significance Index: 11.4500 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 0.1728
Cell Significance Index: 2.0600 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 0.1414
Cell Significance Index: 1.0900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0703
Cell Significance Index: 48.5900 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: 0.0528
Cell Significance Index: 32.9700 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0501
Cell Significance Index: 22.1300 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 0.0500
Cell Significance Index: 0.4200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0199
Cell Significance Index: 7.1300 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 0.0000
Cell Significance Index: 0.0000 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0061
Cell Significance Index: -11.4800 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0089
Cell Significance Index: -6.6200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0132
Cell Significance Index: -7.4400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0137
Cell Significance Index: -25.2000 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0168
Cell Significance Index: -25.9200 - Cell Name: adipocyte of breast (CL0002617)
Fold Change: -0.0206
Cell Significance Index: -0.2600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0206
Cell Significance Index: -28.0000 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0212
Cell Significance Index: -15.5300 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0230
Cell Significance Index: -14.5900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0242
Cell Significance Index: -3.3300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0307
Cell Significance Index: -23.2100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0384
Cell Significance Index: -17.4400 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0403
Cell Significance Index: -21.9900 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0408
Cell Significance Index: -4.6600 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0423
Cell Significance Index: -8.9000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0552
Cell Significance Index: -9.4300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0571
Cell Significance Index: -16.4200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0676
Cell Significance Index: -12.1800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0852
Cell Significance Index: -12.3900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0896
Cell Significance Index: -17.7800 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.1178
Cell Significance Index: -14.4800 - Cell Name: perivascular cell (CL4033054)
Fold Change: -0.1256
Cell Significance Index: -0.5800 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.1338
Cell Significance Index: -6.7600 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1524
Cell Significance Index: -19.6900 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1698
Cell Significance Index: -17.3400 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.1755
Cell Significance Index: -20.7000 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: -0.1807
Cell Significance Index: -2.1900 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1913
Cell Significance Index: -22.2900 - Cell Name: astrocyte (CL0000127)
Fold Change: -0.2001
Cell Significance Index: -2.2900 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.2050
Cell Significance Index: -15.7400 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.2129
Cell Significance Index: -15.0600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2151
Cell Significance Index: -22.4000 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2215
Cell Significance Index: -25.3800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.2631
Cell Significance Index: -19.6100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.2644
Cell Significance Index: -17.7800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.2724
Cell Significance Index: -16.7400 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.3196
Cell Significance Index: -16.6500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.3458
Cell Significance Index: -16.2500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.3523
Cell Significance Index: -21.6000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3862
Cell Significance Index: -21.6700 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.4087
Cell Significance Index: -21.4600 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.4254
Cell Significance Index: -6.8300 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.4272
Cell Significance Index: -22.1900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.4513
Cell Significance Index: -19.9600 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.4561
Cell Significance Index: -9.5200 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.4570
Cell Significance Index: -11.0700 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.4742
Cell Significance Index: -6.7500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.4768
Cell Significance Index: -16.5700 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.5121
Cell Significance Index: -8.1300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.5138
Cell Significance Index: -16.3700 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.5140
Cell Significance Index: -18.8700 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.5170
Cell Significance Index: -8.8600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.5292
Cell Significance Index: -20.0400 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.5335
Cell Significance Index: -18.6900 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.5469
Cell Significance Index: -11.6900 - Cell Name: mural cell (CL0008034)
Fold Change: -0.5487
Cell Significance Index: -6.6800 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.5565
Cell Significance Index: -16.3900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.5580
Cell Significance Index: -18.2700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.5714
Cell Significance Index: -26.6400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.6065
Cell Significance Index: -10.1500 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.6170
Cell Significance Index: -15.4100 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.6213
Cell Significance Index: -17.7300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.6262
Cell Significance Index: -17.5000 - Cell Name: ON-bipolar cell (CL0000749)
Fold Change: -0.6382
Cell Significance Index: -7.2100 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.6384
Cell Significance Index: -8.7100 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.6608
Cell Significance Index: -23.2200 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6779
Cell Significance Index: -19.9100 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.6859
Cell Significance Index: -17.6300 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.7172
Cell Significance Index: -19.1500 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.7590
Cell Significance Index: -16.6200 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.7699
Cell Significance Index: -20.6300 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.7723
Cell Significance Index: -11.0600 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.7809
Cell Significance Index: -19.4800 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.7873
Cell Significance Index: -21.0600 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.7922
Cell Significance Index: -20.8300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.7931
Cell Significance Index: -22.8500 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.7954
Cell Significance Index: -19.0800 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.8065
Cell Significance Index: -16.4100 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.8104
Cell Significance Index: -17.5100 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.8229
Cell Significance Index: -20.9700 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.8269
Cell Significance Index: -8.9900
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3293139256
Symbol: CO5A3_HUMAN
Name: Collagen alpha-3(V) chain
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10722718
Title: The pro-alpha3 (V) collagen chain. Complete primary structure, expression domains in adult and developing tissues, and comparison to the structures and expression domains of the other types V and XI procollagen chains.
PubMed ID: 10722718
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 1571108
Title: Isolation of the alpha 3-chain of human type V collagen and characterization by partial sequencing.
PubMed ID: 1571108
PubMed ID: 19159218
Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
PubMed ID: 19159218
DOI: 10.1021/pr8008012
PubMed ID: 36213313
Title: Mass spectrometric analysis of chondroitin sulfate-linked peptides.
PubMed ID: 36213313
PubMed ID: 37453717
Title: Mapping the Human Chondroitin Sulfate Glycoproteome Reveals an Unexpected Correlation Between Glycan Sulfation and Attachment Site Characteristics.
PubMed ID: 37453717
Sequence Information:
- Length: 1745
- Mass: 172121
- Checksum: 4F5644D2A919D864
- Sequence:
MGNRRDLGQP RAGLCLLLAA LQLLPGTQAD PVDVLKALGV QGGQAGVPEG PGFCPQRTPE GDRAFRIGQA STLGIPTWEL FPEGHFPENF SLLITLRGQP ANQSVLLSIY DERGARQLGL ALGPALGLLG DPFRPLPQQV NLTDGRWHRV AVSIDGEMVT LVADCEAQPP VLGHGPRFIS IAGLTVLGTQ DLGEKTFEGD IQELLISPDP QAAFQACERY LPDCDNLAPA ATVAPQGEPE TPRPRRKGKG KGRKKGRGRK GKGRKKNKEI WTSSPPPDSA ENQTSTDIPK TETPAPNLPP TPTPLVVTST VTTGLNATIL ERSLDPDSGT ELGTLETKAA REDEEGDDST MGPDFRAAEY PSRTQFQIFP GAGEKGAKGE PAVIEKGQQF EGPPGAPGPQ GVVGPSGPPG PPGFPGDPGP PGPAGLPGIP GIDGIRGPPG TVIMMPFQFA GGSFKGPPVS FQQAQAQAVL QQTQLSMKGP PGPVGLTGRP GPVGLPGHPG LKGEEGAEGP QGPRGLQGPH GPPGRVGKMG RPGADGARGL PGDTGPKGDR GFDGLPGLPG EKGQRGDFGH VGQPGPPGED GERGAEGPPG PTGQAGEPGP RGLLGPRGSP GPTGRPGVTG IDGAPGAKGN VGPPGEPGPP GQQGNHGSQG LPGPQGLIGT PGEKGPPGNP GIPGLPGSDG PLGHPGHEGP TGEKGAQGPP GSAGPPGYPG PRGVKGTSGN RGLQGEKGEK GEDGFPGFKG DVGLKGDQGK PGAPGPRGED GPEGPKGQAG QAGEEGPPGS AGEKGKLGVP GLPGYPGRPG PKGSIGFPGP LGPIGEKGKS GKTGQPGLEG ERGPPGSRGE RGQPGATGQP GPKGDVGQDG APGIPGEKGL PGLQGPPGFP GPKGPPGHQG KDGRPGHPGQ RGELGFQGQT GPPGPAGVLG PQGKTGEVGP LGERGPPGPP GPPGEQGLPG LEGREGAKGE LGPPGPLGKE GPAGLRGFPG PKGGPGDPGP TGLKGDKGPP GPVGANGSPG ERGPLGPAGG IGLPGQSGSE GPVGPAGKKG SRGERGPPGP TGKDGIPGPL GPLGPPGAAG PSGEEGDKGD VGAPGHKGSK GDKGDAGPPG QPGIRGPAGH PGPPGADGAQ GRRGPPGLFG QKGDDGVRGF VGVIGPPGLQ GLPGPPGEKG EVGDVGSMGP HGAPGPRGPQ GPTGSEGTPG LPGGVGQPGA VGEKGERGDA GDPGPPGAPG IPGPKGDIGE KGDSGPSGAA GPPGKKGPPG EDGAKGSVGP TGLPGDLGPP GDPGVSGIDG SPGEKGDPGD VGGPGPPGAS GEPGAPGPPG KRGPSGHMGR EGREGEKGAK GEPGPDGPPG RTGPMGARGP PGRVGPEGLR GIPGPVGEPG LLGAPGQMGP PGPLGPSGLP GLKGDTGPKG EKGHIGLIGL IGPPGEAGEK GDQGLPGVQG PPGPKGDPGP PGPIGSLGHP GPPGVAGPLG QKGSKGSPGS MGPRGDTGPA GPPGPPGAPA ELHGLRRRRR FVPVPLPVVE GGLEEVLASL TSLSLELEQL RRPPGTAERP GLVCHELHRN HPHLPDGEYW IDPNQGCARD SFRVFCNFTA GGETCLYPDK KFEIVKLASW SKEKPGGWYS TFRRGKKFSY VDADGSPVNV VQLNFLKLLS ATARQNFTYS CQNAAAWLDE ATGDYSHSAR FLGTNGEELS FNQTTAATVS VPQDGCRLRK GQTKTLFEFS SSRAGFLPLW DVAATDFGQT NQKFGFELGP VCFSS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.