Details for: SEPSECS
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 95.5671
Cell Significance Index: -14.8700 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 59.0593
Cell Significance Index: -14.9800 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 33.0529
Cell Significance Index: -15.6100 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 31.7533
Cell Significance Index: -12.9000 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 13.5639
Cell Significance Index: -12.9500 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 12.5106
Cell Significance Index: -15.4300 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 5.6741
Cell Significance Index: -15.2000 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 3.9457
Cell Significance Index: -15.5700 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 3.7010
Cell Significance Index: -8.1000 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.6566
Cell Significance Index: 163.8800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.0149
Cell Significance Index: 110.3900 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.9962
Cell Significance Index: 59.8100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.8206
Cell Significance Index: 133.4600 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.7005
Cell Significance Index: 11.8000 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.5667
Cell Significance Index: 39.1900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.5359
Cell Significance Index: 106.3500 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.5260
Cell Significance Index: 15.1600 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.3797
Cell Significance Index: 5.1800 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3711
Cell Significance Index: 8.0400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.3337
Cell Significance Index: 38.8900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.3086
Cell Significance Index: 13.9900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.2284
Cell Significance Index: 41.1800 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.2268
Cell Significance Index: 204.7700 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.1821
Cell Significance Index: 3.5600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.1793
Cell Significance Index: 35.9600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1722
Cell Significance Index: 32.7800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.1712
Cell Significance Index: 4.4000 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.1603
Cell Significance Index: 12.3100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1485
Cell Significance Index: 102.7300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.1150
Cell Significance Index: 2.4500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.1149
Cell Significance Index: 41.2100 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0937
Cell Significance Index: 5.2600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0814
Cell Significance Index: 2.8600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.0603
Cell Significance Index: 3.1300 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0583
Cell Significance Index: 2.7200 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0554
Cell Significance Index: 30.2800 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.0458
Cell Significance Index: 1.2800 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0437
Cell Significance Index: 19.3000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0421
Cell Significance Index: 5.7800 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0392
Cell Significance Index: 4.8200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0211
Cell Significance Index: 39.6800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0106
Cell Significance Index: 19.5800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0094
Cell Significance Index: 0.5800 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0091
Cell Significance Index: 5.7900 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0084
Cell Significance Index: 3.8200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0058
Cell Significance Index: 8.9200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0015
Cell Significance Index: -0.2500 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0036
Cell Significance Index: -4.9000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0048
Cell Significance Index: -0.3000 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0102
Cell Significance Index: -1.3100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0107
Cell Significance Index: -7.8600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0176
Cell Significance Index: -13.0400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0195
Cell Significance Index: -14.7400 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0223
Cell Significance Index: -3.2400 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0257
Cell Significance Index: -14.4900 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0278
Cell Significance Index: -17.3700 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.0312
Cell Significance Index: -0.4600 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0315
Cell Significance Index: -3.7200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0414
Cell Significance Index: -4.2300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0438
Cell Significance Index: -12.5900 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0537
Cell Significance Index: -1.4400 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0580
Cell Significance Index: -4.1000 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0599
Cell Significance Index: -3.8700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0622
Cell Significance Index: -7.1300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0777
Cell Significance Index: -16.3700 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0959
Cell Significance Index: -2.5600 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.1036
Cell Significance Index: -0.8500 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1065
Cell Significance Index: -13.7600 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1079
Cell Significance Index: -5.0700 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1108
Cell Significance Index: -7.4500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1232
Cell Significance Index: -12.8300 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1257
Cell Significance Index: -6.5500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1517
Cell Significance Index: -2.6000 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1542
Cell Significance Index: -12.2100 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.1612
Cell Significance Index: -4.0300 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1652
Cell Significance Index: -12.3100 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.1759
Cell Significance Index: -8.8900 - Cell Name: slow muscle cell (CL0000189)
Fold Change: -0.1765
Cell Significance Index: -2.6400 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2027
Cell Significance Index: -8.9700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2079
Cell Significance Index: -6.6600 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.2139
Cell Significance Index: -13.1200 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.2186
Cell Significance Index: -5.9500 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.2304
Cell Significance Index: -4.9300 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.2318
Cell Significance Index: -6.2000 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.2344
Cell Significance Index: -3.4600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.2393
Cell Significance Index: -9.0600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.2604
Cell Significance Index: -13.6700 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.2630
Cell Significance Index: -4.2200 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.2901
Cell Significance Index: -8.5200 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2963
Cell Significance Index: -7.7900 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.3054
Cell Significance Index: -4.3400 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: -0.3087
Cell Significance Index: -2.3600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.3115
Cell Significance Index: -10.2000 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.3273
Cell Significance Index: -6.8500 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.3331
Cell Significance Index: -11.6700 - Cell Name: proerythroblast (CL0000547)
Fold Change: -0.3339
Cell Significance Index: -4.7900 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.3358
Cell Significance Index: -11.6700 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.3433
Cell Significance Index: -10.9400 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.3490
Cell Significance Index: -5.8700 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.3515
Cell Significance Index: -8.4300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 236608983
Symbol: SPCS_HUMAN
Name: O-phosphoseryl-tRNA(Sec) selenium transferase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10801173
Title: Identification of target antigen for SLA/LP autoantibodies in autoimmune hepatitis.
PubMed ID: 10801173
PubMed ID: 10931155
Title: Isolation and characterization of cDNA encoding the antigenic protein of the human tRNP(Ser)Sec complex recognized by autoantibodies from patients with type-1 autoimmune hepatitis.
PubMed ID: 10931155
PubMed ID: 11230739
Title: Soluble liver antigen: isolation of a 35-kd recombinant protein (SLA-p35) specifically recognizing sera from patients with autoimmune hepatitis.
PubMed ID: 11230739
PubMed ID: 11826415
Title: Fine specificity of autoantibodies to soluble liver antigen and liver/pancreas.
PubMed ID: 11826415
PubMed ID: 17142313
Title: RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea.
PubMed ID: 17142313
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 19608919
Title: The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
PubMed ID: 19608919
PubMed ID: 20920667
Title: Mutations disrupting selenocysteine formation cause progressive cerebello-cerebral atrophy.
PubMed ID: 20920667
PubMed ID: 26115735
Title: Selenoprotein biosynthesis defect causes progressive encephalopathy with elevated lactate.
PubMed ID: 26115735
Sequence Information:
- Length: 501
- Mass: 55726
- Checksum: 7136FB390B18760B
- Sequence:
MNRESFAAGE RLVSPAYVRQ GCEARRSHEH LIRLLLEKGK CPENGWDEST LELFLHELAI MDSNNFLGNC GVGEREGRVA SALVARRHYR FIHGIGRSGD ISAVQPKAAG SSLLNKITNS LVLDIIKLAG VHTVANCFVV PMATGMSLTL CFLTLRHKRP KAKYIIWPRI DQKSCFKSMI TAGFEPVVIE NVLEGDELRT DLKAVEAKVQ ELGPDCILCI HSTTSCFAPR VPDRLEELAV ICANYDIPHI VNNAYGVQSS KCMHLIQQGA RVGRIDAFVQ SLDKNFMVPV GGAIIAGFND SFIQEISKMY PGRASASPSL DVLITLLSLG SNGYKKLLKE RKEMFSYLSN QIKKLSEAYN ERLLHTPHNP ISLAMTLKTL DEHRDKAVTQ LGSMLFTRQV SGARVVPLGS MQTVSGYTFR GFMSHTNNYP CAYLNAASAI GMKMQDVDLF IKRLDRCLKA VRKERSKESD DNYDKTEDVD IEEMALKLDN VLLDTYQDAS S
Genular Protein ID: 1216137735
Symbol: A1A4F3_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11181995
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 441
- Mass: 48836
- Checksum: DF8F2FF846061F46
- Sequence:
MDSNNFLGNC GVGEREGRVA SALVARRHYR FIHGIGRSGD ISAVQPKAAG SSLLNKITNS LVLDIIKLAG VHTVANCFVV PMATGMSLTL CFLTLRHKRP KAKYIIWPRI DQKSCFKSMI TAGFEPVVIE NVLEGDELRT DLKAVEAKVQ ELGPDCILCI HSTTSCFAPR VPDRLEELAV ICANYDIPHI VNNAYGVQSS KCMHLIQQGA RVGRIDAFVQ SLDKNFMVPV GGAIIAGFND SFIQEISKMY PGRASASPSL DVLITLLSLG SNGYKKLLKE RKEMFSYLSN QIKKLSEAYN ERLLHTPHNP ISLAMTLKTL DEHRDKAVTQ LGSMLFTRQV SGARVVPLGS MQTVSGYTFR GFMSHTNNYP CAYLNAASAI GMKMQDVDLF IKRLDRCLKA VRKERSKESD DNYDKTEDVD IEEMALKLDN VLLDTYQDAS S
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.