Details for: PSEN2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 57.7324
Cell Significance Index: -8.9800 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 33.5510
Cell Significance Index: -8.5100 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 18.5597
Cell Significance Index: -7.5400 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 7.9917
Cell Significance Index: -7.6300 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 7.2995
Cell Significance Index: -9.0000 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 2.8296
Cell Significance Index: -7.5800 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 2.2833
Cell Significance Index: -9.0100 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 1.5258
Cell Significance Index: 40.8900 - Cell Name: glomerular capillary endothelial cell (CL1001005)
Fold Change: 0.9954
Cell Significance Index: 3.7100 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.8883
Cell Significance Index: 12.1200 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.8367
Cell Significance Index: 43.5800 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.6521
Cell Significance Index: 39.1500 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.6494
Cell Significance Index: 586.3600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5422
Cell Significance Index: 53.6400 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.5311
Cell Significance Index: 57.7700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.4999
Cell Significance Index: 25.9700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.4018
Cell Significance Index: 65.3500 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.3664
Cell Significance Index: 69.7200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3388
Cell Significance Index: 7.3400 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.2925
Cell Significance Index: 20.2300 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.2617
Cell Significance Index: 5.7300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.2348
Cell Significance Index: 6.7700 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.2187
Cell Significance Index: 5.7500 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.2162
Cell Significance Index: 43.3600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.2098
Cell Significance Index: 9.7800 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.1581
Cell Significance Index: 2.2700 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.1297
Cell Significance Index: 5.8800 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1138
Cell Significance Index: 19.4300 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1053
Cell Significance Index: 12.9500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.1005
Cell Significance Index: 18.1200 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.0957
Cell Significance Index: 11.1600 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0864
Cell Significance Index: 11.0700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0842
Cell Significance Index: 11.5600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.0621
Cell Significance Index: 4.6300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0591
Cell Significance Index: 21.2000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0584
Cell Significance Index: 1.4600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0564
Cell Significance Index: 76.6400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0522
Cell Significance Index: 10.3500 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.0506
Cell Significance Index: 5.8000 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0488
Cell Significance Index: 1.0400 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.0438
Cell Significance Index: 2.3000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0432
Cell Significance Index: 23.5900 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0248
Cell Significance Index: 0.8700 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.0182
Cell Significance Index: 0.5000 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0095
Cell Significance Index: 1.2300 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 0.0095
Cell Significance Index: 0.0800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0088
Cell Significance Index: 4.0100 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0074
Cell Significance Index: 3.2700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0049
Cell Significance Index: 7.5500 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0023
Cell Significance Index: 4.4100 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0023
Cell Significance Index: 4.2100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.0021
Cell Significance Index: 0.1300 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.0010
Cell Significance Index: 0.1400 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0000
Cell Significance Index: 0.0000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0007
Cell Significance Index: -0.4900 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0008
Cell Significance Index: -0.0700 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0023
Cell Significance Index: -1.4600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0031
Cell Significance Index: -1.9600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0033
Cell Significance Index: -2.4000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0040
Cell Significance Index: -3.0600 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0044
Cell Significance Index: -2.4600 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0066
Cell Significance Index: -0.7500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0091
Cell Significance Index: -0.9300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0159
Cell Significance Index: -3.3500 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0232
Cell Significance Index: -0.8800 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0261
Cell Significance Index: -7.5000 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0276
Cell Significance Index: -1.3000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0294
Cell Significance Index: -0.6100 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0409
Cell Significance Index: -1.8100 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.0446
Cell Significance Index: -1.3100 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.0567
Cell Significance Index: -0.9000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0567
Cell Significance Index: -3.8100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0636
Cell Significance Index: -7.5000 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.0662
Cell Significance Index: -0.6100 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0702
Cell Significance Index: -2.2500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0706
Cell Significance Index: -7.3500 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0822
Cell Significance Index: -5.8100 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0825
Cell Significance Index: -5.0700 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0881
Cell Significance Index: -5.4000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0925
Cell Significance Index: -5.1900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0999
Cell Significance Index: -7.9200 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.1053
Cell Significance Index: -2.2500 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.1059
Cell Significance Index: -2.9600 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1108
Cell Significance Index: -3.8500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1161
Cell Significance Index: -1.9900 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: -0.1231
Cell Significance Index: -1.2900 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.1243
Cell Significance Index: -1.7700 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1247
Cell Significance Index: -8.0500 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.1293
Cell Significance Index: -3.6900 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: -0.1382
Cell Significance Index: -1.9400 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1398
Cell Significance Index: -3.7400 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.1447
Cell Significance Index: -1.1800 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.1473
Cell Significance Index: -2.2200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.1477
Cell Significance Index: -2.1200 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.1495
Cell Significance Index: -3.8200 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.1589
Cell Significance Index: -3.1900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.1648
Cell Significance Index: -5.2500 - Cell Name: peg cell (CL4033014)
Fold Change: -0.1662
Cell Significance Index: -3.8400 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.1677
Cell Significance Index: -2.4800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.1724
Cell Significance Index: -3.6600
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2250014720
Symbol: PSN2_HUMAN
Name: Presenilin-2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7638622
Title: Candidate gene for the chromosome 1 familial Alzheimer's disease locus.
PubMed ID: 7638622
PubMed ID: 7651536
Title: Familial Alzheimer's disease in kindreds with missense mutations in a gene on chromosome 1 related to the Alzheimer's disease type 3 gene.
PubMed ID: 7651536
DOI: 10.1038/376775a0
PubMed ID: 8618867
Title: Identification and expression analysis of a potential familial Alzheimer disease gene on chromosome 1 related to AD3.
PubMed ID: 8618867
PubMed ID: 8661049
Title: Genomic structure and expression of STM2, the chromosome 1 familial Alzheimer disease gene.
PubMed ID: 8661049
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8574969
Title: Alzheimer-associated presenilins 1 and 2: neuronal expression in brain and localization to intracellular membranes in mammalian cells.
PubMed ID: 8574969
DOI: 10.1038/nm0296-224
PubMed ID: 9437013
Title: Interaction of presenilins with the filamin family of actin-binding proteins.
PubMed ID: 9437013
PubMed ID: 10497236
Title: A loss of function mutation of presenilin-2 interferes with amyloid beta-peptide production and notch signaling.
PubMed ID: 10497236
PubMed ID: 10652302
Title: The transmembrane aspartates in presenilin 1 and 2 are obligatory for gamma-secretase activity and amyloid beta-protein generation.
PubMed ID: 10652302
PubMed ID: 11799129
Title: Endoplasmic reticulum stress-inducible protein, Herp, enhances presenilin-mediated generation of amyloid beta-protein.
PubMed ID: 11799129
PubMed ID: 9521418
Title: Presenilin mutations in Alzheimer's disease.
PubMed ID: 9521418
DOI: 10.1002/(sici)1098-1004(1998)11:3<183::aid-humu1>3.0.co;2-j
PubMed ID: 15385547
Title: Consensus analysis of signal peptide peptidase and homologous human aspartic proteases reveals opposite topology of catalytic domains compared with presenilins.
PubMed ID: 15385547
PubMed ID: 16959576
Title: Presenilins form ER Ca2+ leak channels, a function disrupted by familial Alzheimer's disease-linked mutations.
PubMed ID: 16959576
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21285369
Title: Presenilin 2 modulates endoplasmic reticulum (ER)-mitochondria interactions and Ca2+ cross-talk.
PubMed ID: 21285369
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 9384602
Title: Estimation of the genetic contribution of presenilin-1 and -2 mutations in a population-based study of presenile Alzheimer disease.
PubMed ID: 9384602
DOI: 10.1093/hmg/7.1.43
PubMed ID: 10732806
Title: A novel mutation in the predicted TM2 domain of the presenilin 2 gene in Spanish patient with late-onset Alzheimer's disease.
PubMed ID: 10732806
PubMed ID: 10631141
Title: High prevalence of pathogenic mutations in patients with early-onset dementia detected by sequence analyses of four different genes.
PubMed ID: 10631141
DOI: 10.1086/302702
PubMed ID: 14681895
Title: Atypical dementia associated with a novel presenilin-2 mutation.
PubMed ID: 14681895
DOI: 10.1002/ana.10760
PubMed ID: 17186461
Title: Mutations of presenilin genes in dilated cardiomyopathy and heart failure.
PubMed ID: 17186461
DOI: 10.1086/509900
PubMed ID: 16752394
Title: Mean age-of-onset of familial alzheimer disease caused by presenilin mutations correlates with both increased Abeta42 and decreased Abeta40.
PubMed ID: 16752394
DOI: 10.1002/humu.20336
PubMed ID: 21544564
Title: Presenilin 2 mutation R71W in an Italian early-onset sporadic Alzheimer's disease case.
PubMed ID: 21544564
PubMed ID: 22503161
Title: Identification of PSEN1 and PSEN2 gene mutations and variants in Turkish dementia patients.
PubMed ID: 22503161
PubMed ID: 24844686
Title: Previously unrecognized missense mutation E126K of PSEN2 segregates with early onset Alzheimer's disease in a family.
PubMed ID: 24844686
DOI: 10.3233/jad-140399
PubMed ID: 24838186
Title: Novel mutation in the PSEN2 gene (N141Y) associated with early-onset autosomal dominant Alzheimer's disease in a Chinese Han family.
PubMed ID: 24838186
Sequence Information:
- Length: 448
- Mass: 50140
- Checksum: A927EEC623468116
- Sequence:
MLTFMASDSE EEVCDERTSL MSAESPTPRS CQEGRQGPED GENTAQWRSQ ENEEDGEEDP DRYVCSGVPG RPPGLEEELT LKYGAKHVIM LFVPVTLCMI VVVATIKSVR FYTEKNGQLI YTPFTEDTPS VGQRLLNSVL NTLIMISVIV VMTIFLVVLY KYRCYKFIHG WLIMSSLMLL FLFTYIYLGE VLKTYNVAMD YPTLLLTVWN FGAVGMVCIH WKGPLVLQQA YLIMISALMA LVFIKYLPEW SAWVILGAIS VYDLVAVLCP KGPLRMLVET AQERNEPIFP ALIYSSAMVW TVGMAKLDPS SQGALQLPYD PEMEEDSYDS FGEPSYPEVF EPPLTGYPGE ELEEEEERGV KLGLGDFIFY SVLVGKAAAT GSGDWNTTLA CFVAILIGLC LTLLLLAVFK KALPALPISI TFGLIFYFST DNLVRPFMDT LASHQLYI
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.