Details for: HIF3A
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 23.85rCSI 34.23%PRS 77.51
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CSI 22.04rCSI 49.41%PRS 71.7
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CSI 13.8rCSI 36.61%PRS 89.38
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CSI 12.36rCSI 16.91%PRS 78.16
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CSI 12.17rCSI 19.41%PRS 78.43
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CSI 11.06rCSI 20.1%PRS 78.85
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CSI 7.48rCSI 10.36%PRS 82.71
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CSI 7.32rCSI 9.32%PRS 90.37
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CSI 6.51rCSI 8.87%PRS 79.01
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CSI 6.39rCSI 7%PRS 87.91
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CSI 6.37rCSI 23.86%PRS 80.41
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CSI 6.34rCSI 10.08%PRS 80.63
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CSI 6.33rCSI 10.95%PRS 79.63
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CSI 4.93rCSI 7.93%PRS 72.27
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CSI 4.81rCSI 20.43%PRS 79.78
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CSI 4.67rCSI 7.37%PRS 87.3
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CSI 4.49rCSI 7.17%PRS 89.47
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CSI 4.46rCSI 11.46%PRS 82.57
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CSI 4.34rCSI 4.04%PRS 87.22
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CSI 3.88rCSI 9.33%PRS 88.03
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CSI 3.87rCSI 7.37%PRS 93.25
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CSI 3.82rCSI 3.17%PRS 87.35
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CSI 3.78rCSI 4.85%PRS 77.24
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CSI 3.61rCSI 2.93%PRS 85.73
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CSI 3.6rCSI 8.17%PRS 85.58
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CSI 3.59rCSI 14.49%PRS 86.77
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CSI 3.45rCSI 7.6%PRS 69.2
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CSI 3.45rCSI 6.09%PRS 70.39
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CSI 3.41rCSI 3.14%PRS 87.33
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CSI 3.32rCSI 3.47%PRS 83.88
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CSI 3.27rCSI 6.79%PRS 83.86
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CSI 3.13rCSI 5.74%PRS 88.62
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CSI 3.08rCSI 7.19%PRS 93.53
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CSI 3.05rCSI 6.97%PRS 78.97
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CSI 2.84rCSI 3.39%PRS 71.03
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CSI 2.72rCSI 3.89%PRS 86.78
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CSI 2.69rCSI 3.99%PRS 88.81
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CSI 2.62rCSI 2.47%PRS 84.4
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CSI 2.62rCSI 12.01%PRS 88.78
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CSI 2.61rCSI 6.21%PRS 81.29
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CSI 2.52rCSI 3.02%PRS 84.6
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CSI 2.49rCSI 13.62%PRS 82.66
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CSI 2.43rCSI 6.9%PRS 82.09
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CSI 2.4rCSI 2.31%PRS 85.49
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CSI 2.39rCSI 3.25%PRS 92.16
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CSI 2.31rCSI 2.87%PRS 86.53
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CSI 2.23rCSI 3.91%PRS 81.64
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CSI 2.23rCSI 3.16%PRS 83.61
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CSI 2.21rCSI 10.6%PRS 82.43
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CSI 2.2rCSI 3.41%PRS 88.42
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CSI 2.14rCSI 5.77%PRS 89.31
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CSI 2.09rCSI 5%PRS 89.08
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CSI 2.09rCSI 5.02%PRS 88.19
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CSI 2.08rCSI 6.68%PRS 83.2
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CSI 2rCSI 14.13%PRS 79.83
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CSI 1.96rCSI 4.86%PRS 86.85
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CSI 1.84rCSI 5.87%PRS 84.38
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CSI 1.8rCSI 5.55%PRS 89.13
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CSI 1.79rCSI 5.83%PRS 83.62
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CSI 1.78rCSI 9.9%PRS 87.68
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CSI 1.68rCSI 4.97%PRS 85.47
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CSI 1.68rCSI 4.26%PRS 80.22
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CSI 1.66rCSI 2.92%PRS 89.89
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CSI 1.55rCSI 4.1%PRS 91.12
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CSI 1.55rCSI 1.49%PRS 81.25
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CSI 1.45rCSI 2.72%PRS 89.9
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CSI 1.31rCSI 3.6%PRS 82.59
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CSI 1.26rCSI 3.66%PRS 85.5
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CSI 1.21rCSI 3.4%PRS 81.61
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CSI 1.11rCSI 6.18%PRS 92.63
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CSI 1.07rCSI 4.85%PRS 90.98
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CSI 1.03rCSI 5.05%PRS 91.6
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CSI 1.02rCSI 4.9%PRS 86.75
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CSI 0.96rCSI 3.66%PRS 78.64
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CSI 0.91rCSI 6.96%PRS 86.71
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CSI 0.81rCSI 5.06%PRS 79.35
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CSI 0.79rCSI 2.8%PRS 88.29
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CSI 0.74rCSI 3.89%PRS 86.98
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CSI 0.71rCSI 4.05%PRS 89.77
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CSI 0.7rCSI 4.04%PRS 82.96
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CSI 0.63rCSI 6.56%PRS 80.2
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CSI 0.53rCSI 4.19%PRS 91.75
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CSI 0.44rCSI 3%PRS 90.47
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CSI 0.32rCSI 6.09%PRS 91.57
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CSI 0.3rCSI 2.18%PRS 75.82
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CSI 0.25rCSI 2.7%PRS 89.31
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
-
Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 2974439232
Symbol: HIF3A_HUMAN
Name: Basic-helix-loop-helix-PAS protein MOP7
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11573933
Title: Expression and characterization of hypoxia-inducible factor (HIF)-3alpha in human kidney: suppression of HIF-mediated gene expression by HIF-3alpha.
PubMed ID: 11573933
PubMed ID: 16126907
Title: Human HIF-3alpha4 is a dominant-negative regulator of HIF-1 and is down-regulated in renal cell carcinoma.
PubMed ID: 16126907
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 12538644
Title: Multiple splice variants of the human HIF-3 alpha locus are targets of the von Hippel-Lindau E3 ubiquitin ligase complex.
PubMed ID: 12538644
PubMed ID: 16775626
Title: Hypoxia upregulates hypoxia inducible factor (HIF)-3alpha expression in lung epithelial cells: characterization and comparison with HIF-1alpha.
PubMed ID: 16775626
PubMed ID: 17998805
Title: Dominant-negative HIF-3 alpha 4 suppresses VHL-null renal cell carcinoma progression.
PubMed ID: 17998805
DOI: 10.4161/cc.6.22.4947
PubMed ID: 19694616
Title: The human HIF (hypoxia-inducible factor)-3alpha gene is a HIF-1 target gene and may modulate hypoxic gene induction.
PubMed ID: 19694616
DOI: 10.1042/bj20090120
PubMed ID: 20416395
Title: Hypoxia-inducible factor (HIF)-3alpha is subject to extensive alternative splicing in human tissues and cancer cells and is regulated by HIF-1 but not HIF-2.
PubMed ID: 20416395
PubMed ID: 21069422
Title: Cell-specific and hypoxia-dependent regulation of human HIF-3alpha: inhibition of the expression of HIF target genes in vascular cells.
PubMed ID: 21069422
Sequence Information:
- Length: 669
- Mass: 72433
- Checksum: 81C4C84517000DE2
- Sequence:
MALGLQRARS TTELRKEKSR DAARSRRSQE TEVLYQLAHT LPFARGVSAH LDKASIMRLT ISYLRMHRLC AAGEWNQVGA GGEPLDACYL KALEGFVMVL TAEGDMAYLS ENVSKHLGLS QLELIGHSIF DFIHPCDQEE LQDALTPQQT LSRRKVEAPT ERCFSLRMKS TLTSRGRTLN LKAATWKVLN CSGHMRAYKP PAQTSPAGSP DSEPPLQCLV LICEAIPHPG SLEPPLGRGA FLSRHSLDMK FTYCDDRIAE VAGYSPDDLI GCSAYEYIHA LDSDAVSKSI HTLLSKGQAV TGQYRFLARS GGYLWTQTQA TVVSGGRGPQ SESIVCVHFL ISQVEETGVV LSLEQTEQHS RRPIQRGAPS QKDTPNPGDS LDTPGPRILA FLHPPSLSEA ALAADPRRFC SPDLRRLLGP ILDGASVAAT PSTPLATRHP QSPLSADLPD ELPVGTENVH RLFTSGKDTE AVETDLDIAQ DADALDLEML APYISMDDDF QLNASEQLPR AYHRPLGAVP RPRARSFHGL SPPALEPSLL PRWGSDPRLS CSSPSRGDPS ASSPMAGARK RTLAQSSEDE DEGVELLGVR PPKRSPSPEH ENFLLFPLSL SFLLTGGPAP GSLQDPSTPL LNLNEPLGLG PSLLSPYSDE DTTQPGGPFQ PRAGSAQAD
Genular Protein ID: 2221852890
Symbol: H0YDZ5_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 11181995
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
Sequence Information:
- Length: 450
- Mass: 48574
- Checksum: 75E1791B14449283
- Sequence:
MRPAAGAARR PRCCTSWLTR CPSPAASAPT WTRPLSCASP SATCACTASA PQLELIGHSI FDFIHPCDQE ELQDALTPQQ TLSRRKVEAP TERCFSLRMK STLTSRGRTL NLKAATWKVL NCSGHMRAYK PPAQTSPAGS PDSEPPLQCL VLICEAIPHP GSLEPPLGRG AFLSRHSLDM KFTYCDDRIA EVAGYSPDDL IGCSAYEYIH ALDSDAVSKS IHTLLSKGQA VTGQYRFLAR SGGYLWTQTQ ATVVSGGRGP QSESIVCVHF LISQVEETGV VLSLEQTEQH SRRPIQRGAP SQKDTPNPGD SLDTPGPRIL AFLHPPSLSE AALAADPRRF CSPDLRRLLG PILDGASVAA TPSTPLATRH PQSPLSADLP DELPVGTENV HRLFTSGKDT EAVETDLDIA QDPSTPLLNL NEPLGFHFVT QSGVQWHKHS SPQPRPPGLK
Genular Protein ID: 1963473332
Symbol: B2RBI6_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 667
- Mass: 72328
- Checksum: 4C6E76238238DF85
- Sequence:
MDWQDHRSTT ELRKEKSRDA ARSRRSQETE VLYQLAHTLP LARGVSAHLD KASIMRLTIS YLRMHRLCAA GEWNQVGAGG EPLDACYLKA LEGFVMVLTA EGDMAYLSEN VSKHLGLSQL ELIGHSIFDF IHPCDQEELQ DALTPQQTLS RRKVEAPTER CFSLRMKSTL TSRGRTLNLK AATWKVLNCS GHMRAYKPPA QTSPAGSPDS EPPLQCLVLI CEAIPHPGSL EPPLGRGAFL SRHSLDMKFT YCDDRIAEVA GYSPDDLIGC SAYEYIHALD SDAVSKSIHT LLSKGQAVTG QYRFLARSGG YLWTQTQATV VSGGRGPQSE SIVCVHFLIS QVEETGVVLS LEQTEQHSRR PIQRGAPSQK DTPNPGDSLD TPGPRILAFL HPPSLSEAAL AADPRRFCGP DLRRLLGPIL DGASVAATPS TPLATRHPQS PLSADLPDEL PVGTENVHRL FTSGKDTEAV ETDLDTAQDA DALDLEMLAP YISMDDDFQL NASEQLPRAY HRPLGAVPRP RARSFHGLSP PALEPSLLPR WGSDPRLSCS SPSRGDPSAS SPMAGARKRT LAQSSEDEDE GVELLGVRPP KRSPSPEHEN FLLFPLSLSF LLTGGPAPGS LQDPSTPLLN LNEPLGLGPS LLSPYSDEDT TQPGGPFQPR AGSAQAD
Genular Protein ID: 3477765206
Symbol: M0R104_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
Sequence Information:
- Length: 594
- Mass: 64082
- Checksum: 00A4DAE1AFCB39B8
- Sequence:
MRPAAGAARR PRCCTSWLTR CPSPAASAPT WTRPLSCASP SATCACTASA PQLELIGHSI FDFIHPCDQE ELQDALTPQQ TLSRRKVEAP TERCFSLRMK STLTSRGRTL NLKAATWKVL NCSGHMRAYK PPAQTSPAGS PDSEPPLQCL VLICEAIPHP GSLEPPLGRG AFLSRHSLDM KFTYCDDRIA EVAGYSPDDL IGCSAYEYIH ALDSDAVSKS IHTLLSKGQA VTGQYRFLAR SGGYLWTQTQ ATVVSGGRGP QSESIVCVHF LISQVEETGV VLSLEQTEQH SRRPIQRGAP SQKDTPNPGD SLDTPGPRIL AFLHPPSLSE AALAADPRRF CSPDLRRLLG PILDGASVAA TPSTPLATRH PQSPLSADLP DELPVGTENV HRLFTSGKDT EAVETDLDIA QDADALDLEM LAPYISMDDD FQLNASEQLP RAYHRPLGAV PRPRARSFHG LSPPALEPSL LPRWGSDPRL SCSSPSRGDP SASSPMAGAR KRTLAQSSED EDEGVELLGV RPPKRSPSPE HENFLLFPLS LSFLLTGGPA PGSLQDPSTP LLNLNEPLGF HFVTQSGVQW HKHSSPQPRP PGLK