Details for: TRAF6
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 3.75rCSI 6.63%PRS 76.52
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CSI 3.56rCSI 2.8%PRS 92.47
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CSI 3.56rCSI 2.95%PRS 91.52
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CSI 2.89rCSI 1.94%PRS 97.54
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CSI 2.78rCSI 2.67%PRS 96.38
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CSI 2.7rCSI 2.83%PRS 87.91
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CSI 2.69rCSI 1.99%PRS 86.46
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CSI 2.41rCSI 5%PRS 88.41
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CSI 2.3rCSI 3.97%PRS 84.74
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CSI 2.13rCSI 4.32%PRS 72.59
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CSI 2.08rCSI 2.44%PRS 97.05
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CSI 1.92rCSI 1.48%PRS 93.06
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CSI 1.79rCSI 3%PRS 77.07
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CSI 1.77rCSI 7.16%PRS 90.79
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CSI 1.57rCSI 3.51%PRS 77.54
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CSI 1.37rCSI 3.47%PRS 83.86
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CSI 1.32rCSI 2.34%PRS 61.3
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CSI 1.2rCSI 2.92%PRS 74.91
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CSI 1.11rCSI 4.9%PRS 79.85
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CSI 1.02rCSI 1.44%PRS 86.25
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CSI 1.01rCSI 1.38%PRS 60.85
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CSI 0.93rCSI 5.47%PRS 77.56
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CSI 0.88rCSI 2.5%PRS 90.69
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CSI 0.84rCSI 1.02%PRS 71.08
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CSI 0.71rCSI 2.56%PRS 75.03
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CSI 0.67rCSI 2.53%PRS 77.3
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CSI 0.59rCSI 1.86%PRS 80.1
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CSI 0.28rCSI 6.69%PRS 74.78
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CSI 0.26rCSI 6.23%PRS 74.94
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 1370190705
Symbol: TRAF6_HUMAN
Name: TNF receptor-associated factor 6
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8837778
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9020361
Title: MAP3K-related kinase involved in NF-kappaB induction by TNF, CD95 and IL-1.
PubMed ID: 9020361
DOI: 10.1038/385540a0
PubMed ID: 9374458
Title: IRAK (Pelle) family member IRAK-2 and MyD88 as proximal mediators of IL-1 signaling.
PubMed ID: 9374458
PubMed ID: 9642260
Title: RIP2 is a novel NF-kappaB-activating and cell death-inducing kinase.
PubMed ID: 9642260
PubMed ID: 9774460
Title: The TRAF family of signal transducers mediates NF-kappaB activation by the TRANCE receptor.
PubMed ID: 9774460
PubMed ID: 9432981
Title: Tumor necrosis factor receptor-associated factor 6 (TRAF6) stimulates extracellular signal-regulated kinase (ERK) activity in CD40 signaling along a ras-independent pathway.
PubMed ID: 9432981
PubMed ID: 9774977
Title: ASK1 is essential for JNK/SAPK activation by TRAF2.
PubMed ID: 9774977
PubMed ID: 10346818
Title: Signaling by proinflammatory cytokines: oligomerization of TRAF2 and TRAF6 is sufficient for JNK and IKK activation and target gene induction via an amino-terminal effector domain.
PubMed ID: 10346818
PubMed ID: 9915784
Title: Association of the p75 neurotrophin receptor with TRAF6.
PubMed ID: 9915784
PubMed ID: 10383454
Title: IRAK-M is a novel member of the Pelle/interleukin-1 receptor-associated kinase (IRAK) family.
PubMed ID: 10383454
PubMed ID: 10514511
Title: TRAF family proteins interact with the common neurotrophin receptor and modulate apoptosis induction.
PubMed ID: 10514511
PubMed ID: 10635328
Title: TRANCE, a TNF family member, activates Akt/PKB through a signaling complex involving TRAF6 and c-Src.
PubMed ID: 10635328
PubMed ID: 10094049
Title: The kinase TAK1 can activate the NIK-I kappaB as well as the MAP kinase cascade in the IL-1 signalling pathway.
PubMed ID: 10094049
DOI: 10.1038/18465
PubMed ID: 10523862
Title: Mediation of TNF receptor-associated factor effector functions by apoptosis signal-regulating kinase-1 (ASK1).
PubMed ID: 10523862
PubMed ID: 11057907
Title: Activation of the IkappaB kinase complex by TRAF6 requires a dimeric ubiquitin-conjugating enzyme complex and a unique polyubiquitin chain.
PubMed ID: 11057907
PubMed ID: 10764746
Title: TTRAP, a novel protein that associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor-associated factors (TRAFs), and that inhibits nuclear factor-kappa B activation.
PubMed ID: 10764746
PubMed ID: 10908663
Title: B cell maturation protein is a receptor for the tumor necrosis factor family member TALL-1.
PubMed ID: 10908663
PubMed ID: 10920205
Title: T6BP, a TRAF6-interacting protein involved in IL-1 signaling.
PubMed ID: 10920205
PubMed ID: 11460167
Title: TAK1 is a ubiquitin-dependent kinase of MKK and IKK.
PubMed ID: 11460167
DOI: 10.1038/35085597
PubMed ID: 12459498
Title: NF-kappaB activator Act1 associates with IL-1/Toll pathway adapter molecule TRAF6.
PubMed ID: 12459498
PubMed ID: 11751921
Title: A novel zinc finger protein that inhibits osteoclastogenesis and the function of tumor necrosis factor receptor-associated factor 6.
PubMed ID: 11751921
PubMed ID: 11960013
Title: IRAK4: a novel member of the IRAK family with the properties of an IRAK-kinase.
PubMed ID: 11960013
PubMed ID: 12496252
Title: Pellino 1 is required for interleukin-1 (IL-1)-mediated signaling through its interaction with the IL-1 receptor-associated kinase 4 (IRAK4)-IRAK-tumor necrosis factor receptor-associated factor 6 (TRAF6) complex.
PubMed ID: 12496252
PubMed ID: 12804775
Title: Pellino2 activates the mitogen activated protein kinase pathway.
PubMed ID: 12804775
PubMed ID: 12721283
Title: TIRP, a novel Toll/interleukin-1 receptor (TIR) domain-containing adapter protein involved in TIR signaling.
PubMed ID: 12721283
PubMed ID: 12874243
Title: Pellino3, a novel member of the Pellino protein family, promotes activation of c-Jun and Elk-1 and may act as a scaffolding protein.
PubMed ID: 12874243
PubMed ID: 14530355
Title: Toll/IL-1 receptor domain-containing adapter inducing IFN-beta (TRIF) associates with TNF receptor-associated factor 6 and TANK-binding kinase 1, and activates two distinct transcription factors, NF-kappa B and IFN-regulatory factor-3, in the Toll-like receptor signaling.
PubMed ID: 14530355
PubMed ID: 14739303
Title: Mechanisms of the TRIF-induced interferon-stimulated response element and NF-kappaB activation and apoptosis pathways.
PubMed ID: 14739303
PubMed ID: 14754897
Title: ZNF216 is an A20-like and IkappaB kinase gamma-interacting inhibitor of NFkappaB activation.
PubMed ID: 14754897
PubMed ID: 15121867
Title: TRAF family proteins link PKR with NF-kappa B activation.
PubMed ID: 15121867
PubMed ID: 14982987
Title: Toll-like receptor 3-mediated activation of NF-kappaB and IRF3 diverges at Toll-IL-1 receptor domain-containing adapter inducing IFN-beta.
PubMed ID: 14982987
PubMed ID: 16125763
Title: Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-kappaB and IRF 3.
PubMed ID: 16125763
PubMed ID: 16286016
Title: IL-33, an interleukin-1-like cytokine that signals via the IL-1 receptor-related protein ST 2 and induces T helper type 2-associated cytokines.
PubMed ID: 16286016
PubMed ID: 16221674
Title: FLN29, a novel interferon- and LPS-inducible gene acting as a negative regulator of toll-like receptor signaling.
PubMed ID: 16221674
PubMed ID: 16153868
Title: VISA is an adapter protein required for virus-triggered IFN-beta Signaling.
PubMed ID: 16153868
PubMed ID: 15870274
Title: The LIM protein Ajuba influences interleukin-1-induced NF-kappaB activation by affecting the assembly and activity of the protein kinase Czeta/p62/TRAF6 signaling complex.
PubMed ID: 15870274
PubMed ID: 16378096
Title: Association of beta-arrestin and TRAF6 negatively regulates Toll-like receptor-interleukin 1 receptor signaling.
PubMed ID: 16378096
DOI: 10.1038/ni1294
PubMed ID: 16951688
Title: Smad6 negatively regulates interleukin 1-receptor-Toll-like receptor signaling through direct interaction with the adapter Pellino-1.
PubMed ID: 16951688
DOI: 10.1038/ni1383
PubMed ID: 17135271
Title: Site-specific Lys-63-linked tumor necrosis factor receptor-associated factor 6 auto-ubiquitination is a critical determinant of I kappa B kinase activation.
PubMed ID: 17135271
PubMed ID: 17449468
Title: RBCK1 negatively regulates tumor necrosis factor- and interleukin-1-triggered NF-kappaB activation by targeting TAB2/3 for degradation.
PubMed ID: 17449468
PubMed ID: 17703191
Title: Essential role for TAX1BP1 in the termination of TNF-alpha-, IL-1- and LPS-mediated NF-kappaB and JNK signaling.
PubMed ID: 17703191
PubMed ID: 18093978
Title: Nuclear tumor necrosis factor receptor-associated factor 6 in lymphoid cells negatively regulates c-Myb-mediated transactivation through small ubiquitin-related modifier-1 modification.
PubMed ID: 18093978
PubMed ID: 18347055
Title: Lys63-linked polyubiquitination of IRAK-1 is required for interleukin-1 receptor- and toll-like receptor-mediated NF-kappaB activation.
PubMed ID: 18347055
DOI: 10.1128/mcb.02098-07
PubMed ID: 18758450
Title: The type I TGF-beta receptor engages TRAF6 to activate TAK1 in a receptor kinase-independent manner.
PubMed ID: 18758450
DOI: 10.1038/ncb1780
PubMed ID: 19521662
Title: WDR34 is a novel TAK1-associated suppressor of the IL-1R/TLR3/TLR4-induced NF-kappaB activation pathway.
PubMed ID: 19521662
PubMed ID: 19675569
Title: Direct activation of protein kinases by unanchored polyubiquitin chains.
PubMed ID: 19675569
DOI: 10.1038/nature08247
PubMed ID: 19713527
Title: The E3 ligase TRAF6 regulates Akt ubiquitination and activation.
PubMed ID: 19713527
PubMed ID: 19825828
Title: Act1, a U-box E3 ubiquitin ligase for IL-17 signaling.
PubMed ID: 19825828
PubMed ID: 20079715
Title: NUMBL interacts with TRAF6 and promotes the degradation of TRAF6.
PubMed ID: 20079715
PubMed ID: 20628368
Title: Tom70 mediates activation of interferon regulatory factor 3 on mitochondria.
PubMed ID: 20628368
DOI: 10.1038/cr.2010.103
PubMed ID: 21302310
Title: Alternative splicing of CARMA2/CARD14 transcripts generates protein variants with differential effect on NF-kappaB activation and endoplasmic reticulum stress-induced cell death.
PubMed ID: 21302310
DOI: 10.1002/jcp.22667
PubMed ID: 21813773
Title: IFN-induced TPR protein IFIT3 potentiates antiviral signaling by bridging MAVS and TBK1.
PubMed ID: 21813773
PubMed ID: 23776175
Title: SASH1 is a scaffold molecule in endothelial TLR4 signaling.
PubMed ID: 23776175
PubMed ID: 23524951
Title: mTOR inhibits autophagy by controlling ULK1 ubiquitylation, self-association and function through AMBRA1 and TRAF6.
PubMed ID: 23524951
DOI: 10.1038/ncb2708
PubMed ID: 23514740
Title: TNFR-associated factor 6 regulates TCR signaling via interaction with and modification of LAT adapter.
PubMed ID: 23514740
PubMed ID: 24586164
Title: Epstein-Barr virus large tegument protein BPLF1 contributes to innate immune evasion through interference with toll-like receptor signaling.
PubMed ID: 24586164
PubMed ID: 25026888
Title: LRRC19 expressed in the kidney induces TRAF2/6-mediated signals to prevent infection by uropathogenic bacteria.
PubMed ID: 25026888
DOI: 10.1038/ncomms5434
PubMed ID: 25907557
Title: The Us3 Protein of Herpes Simplex Virus 1 Inhibits T Cell Signaling by Confining Linker for Activation of T Cells (LAT) Activation via TRAF6 Protein.
PubMed ID: 25907557
PubMed ID: 25736436
Title: WDFY1 mediates TLR3/4 signaling by recruiting TRIF.
PubMed ID: 25736436
PubMed ID: 25861989
Title: TRAF family member-associated NF-kappaB activator (TANK) inhibits genotoxic nuclear factor kappaB activation by facilitating deubiquitinase USP10-dependent deubiquitination of TRAF6 ligase.
PubMed ID: 25861989
PubMed ID: 28087809
Title: Trim13 potentiates toll-like receptor 2-mediated nuclear factor kappaB activation via K29-linked polyubiquitination of tumor necrosis factor receptor-associated factor 6.
PubMed ID: 28087809
PubMed ID: 31620128
Title: CRBN Is a Negative Regulator of Bactericidal Activity and Autophagy Activation Through Inhibiting the Ubiquitination of ECSIT and BECN1.
PubMed ID: 31620128
PubMed ID: 12140561
Title: Distinct molecular mechanism for initiating TRAF6 signalling.
PubMed ID: 12140561
DOI: 10.1038/nature00888
PubMed ID: 17327397
Title: Structure, interactions, and dynamics of the RING domain from human TRAF6.
PubMed ID: 17327397
DOI: 10.1110/ps.062358007
PubMed ID: 19465916
Title: E2 interaction and dimerization in the crystal structure of TRAF6.
PubMed ID: 19465916
DOI: 10.1038/nsmb.1605
Sequence Information:
- Length: 522
- Mass: 59573
- Checksum: 5AB9C255CCFEE749
- Sequence:
MSLLNCENSC GSSQSESDCC VAMASSCSAV TKDDSVGGTA STGNLSSSFM EEIQGYDVEF DPPLESKYEC PICLMALREA VQTPCGHRFC KACIIKSIRD AGHKCPVDNE ILLENQLFPD NFAKREILSL MVKCPNEGCL HKMELRHLED HQAHCEFALM DCPQCQRPFQ KFHINIHILK DCPRRQVSCD NCAASMAFED KEIHDQNCPL ANVICEYCNT ILIREQMPNH YDLDCPTAPI PCTFSTFGCH EKMQRNHLAR HLQENTQSHM RMLAQAVHSL SVIPDSGYIS EVRNFQETIH QLEGRLVRQD HQIRELTAKM ETQSMYVSEL KRTIRTLEDK VAEIEAQQCN GIYIWKIGNF GMHLKCQEEE KPVVIHSPGF YTGKPGYKLC MRLHLQLPTA QRCANYISLF VHTMQGEYDS HLPWPFQGTI RLTILDQSEA PVRQNHEEIM DAKPELLAFQ RPTIPRNPKG FGYVTFMHLE ALRQRTFIKD DTLLVRCEVS TRFDMGSLRR EGFQPRSTDA GV