Details for: TYROBP

Gene ID: 7305

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: TYROBP

Ensembl ID: ENSG00000011600

Description: transmembrane immune signaling adaptor TYROBP

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • CD16-positive, CD56-dim natural killer cell, human CL0000939
    CSI 104.68
    rCSI 69.76%
    PRS 95.67
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 98.88
    rCSI 76.18%
    PRS 93.17
  • elicited macrophage CL0000861
    CSI 87.94
    rCSI 80.74%
    PRS 94.54
  • CD16-negative, CD56-bright natural killer cell, human CL0000938
    CSI 81.79
    rCSI 61.33%
    PRS 97.6
  • plasmacytoid dendritic cell, human CL0001058
    CSI 80.8
    rCSI 56.41%
    PRS 93.25
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 63.43
    rCSI 76.61%
    PRS 94.7
  • activated type II NK T cell CL0000931
    CSI 63.32
    rCSI 71.27%
    PRS 96.93
  • myeloid leukocyte CL0000766
    CSI 62.78
    rCSI 57.92%
    PRS 91.44
  • alternatively activated macrophage CL0000890
    CSI 62.19
    rCSI 78.18%
    PRS 95.28
  • CD14-positive, CD16-positive monocyte CL0002397
    CSI 60.44
    rCSI 79.2%
    PRS 95.95
  • CD14-positive monocyte CL0001054
    CSI 59.8
    rCSI 74.48%
    PRS 95.44
  • classical monocyte CL0000860
    CSI 47.38
    rCSI 70.24%
    PRS 94.89
  • non-classical monocyte CL0000875
    CSI 46.89
    rCSI 75.16%
    PRS 94.83
  • alveolar macrophage CL0000583
    CSI 45.91
    rCSI 75.61%
    PRS 92.06
  • promonocyte CL0000559
    CSI 43.47
    rCSI 74.47%
    PRS 92.33
  • intermediate monocyte CL0002393
    CSI 43.15
    rCSI 65.11%
    PRS 94.04
  • dendritic cell CL0000451
    CSI 42.65
    rCSI 52.54%
    PRS 89.99
  • dendritic cell, human CL0001056
    CSI 39.75
    rCSI 61.05%
    PRS 95.34
  • myeloid dendritic cell CL0000782
    CSI 39.03
    rCSI 56.54%
    PRS 97.08
  • Hofbauer cell CL3000001
    CSI 38.52
    rCSI 72.72%
    PRS 94.77
  • granulocyte monocyte progenitor cell CL0000557
    CSI 38.42
    rCSI 33.27%
    PRS 92.28
  • Langerhans cell CL0000453
    CSI 36.94
    rCSI 56.42%
    PRS 95.79
  • gamma-delta T cell CL0000798
    CSI 36.33
    rCSI 42.67%
    PRS 95.45
  • inflammatory macrophage CL0000863
    CSI 35.94
    rCSI 61.42%
    PRS 97.19
  • plasmacytoid dendritic cell CL0000784
    CSI 35.67
    rCSI 36.13%
    PRS 95.78
  • conventional dendritic cell CL0000990
    CSI 35.22
    rCSI 29.4%
    PRS 85.3
  • macrophage CL0000235
    CSI 33.99
    rCSI 61.84%
    PRS 90.89
  • monocyte CL0000576
    CSI 32.34
    rCSI 58.45%
    PRS 91.49
  • lung macrophage CL1001603
    CSI 32.12
    rCSI 71.75%
    PRS 94.48
  • mononuclear phagocyte CL0000113
    CSI 31.69
    rCSI 69.76%
    PRS 92.57
  • Kupffer cell CL0000091
    CSI 31.64
    rCSI 72.36%
    PRS 91.36
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 31.32
    rCSI 23.83%
    PRS 97.76
  • hematopoietic precursor cell CL0008001
    CSI 31.05
    rCSI 31.95%
    PRS 95.8
  • group 3 innate lymphoid cell CL0001071
    CSI 30.79
    rCSI 23.13%
    PRS 93.55
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 29.3
    rCSI 19.74%
    PRS 97.62
  • mature NK T cell CL0000814
    CSI 29.19
    rCSI 37.34%
    PRS 94.29
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 28.59
    rCSI 34.14%
    PRS 97.55
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 28.26
    rCSI 25.74%
    PRS 97.1
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 26.99
    rCSI 28.19%
    PRS 95.99
  • common dendritic progenitor CL0001029
    CSI 26.81
    rCSI 33.65%
    PRS 94.92
  • T follicular helper cell CL0002038
    CSI 25.77
    rCSI 19.28%
    PRS 96.79
  • hematopoietic stem cell CL0000037
    CSI 25.36
    rCSI 16.85%
    PRS 91.69
  • mature T cell CL0002419
    CSI 24.62
    rCSI 19.15%
    PRS 97.14
  • activated CD8-positive, alpha-beta T cell CL0000906
    CSI 23.27
    rCSI 22.87%
    PRS 96.58
  • intraepithelial lymphocyte CL0002496
    CSI 22.41
    rCSI 60.99%
    PRS 97.34
  • natural killer cell CL0000623
    CSI 22.3
    rCSI 43.22%
    PRS 92.7
  • innate lymphoid cell CL0001065
    CSI 20.46
    rCSI 42.23%
    PRS 84.78
  • myeloid cell CL0000763
    CSI 20.34
    rCSI 83.75%
    PRS 93.09
  • early lymphoid progenitor CL0000936
    CSI 19.86
    rCSI 17.44%
    PRS 93.23
  • promyelocyte CL0000836
    CSI 19.38
    rCSI 27.95%
    PRS 92.41
  • granulocyte CL0000094
    CSI 18.31
    rCSI 27.97%
    PRS 94.2
  • glial cell CL0000125
    CSI 17.44
    rCSI 66.42%
    PRS 83.74
  • lung interstitial macrophage CL4033043
    CSI 17.3
    rCSI 38.83%
    PRS 96.76
  • basophil CL0000767
    CSI 16.79
    rCSI 35.53%
    PRS 95.13
  • memory T cell CL0000813
    CSI 16.42
    rCSI 31.63%
    PRS 97.79
  • colon macrophage CL0009038
    CSI 15.83
    rCSI 73.11%
    PRS 96.36
  • erythrocyte CL0000232
    CSI 15.57
    rCSI 35.32%
    PRS 88.69
  • class switched memory B cell CL0000972
    CSI 14.69
    rCSI 10.97%
    PRS 96.3
  • hepatic stellate cell CL0000632
    CSI 14.34
    rCSI 53.72%
    PRS 85.66
  • fibroblast of lung CL0002553
    CSI 13.55
    rCSI 12.61%
    PRS 91.53
  • pulmonary artery endothelial cell CL1001568
    CSI 13.49
    rCSI 18.35%
    PRS 94.54
  • myeloid dendritic cell, human CL0001057
    CSI 12.67
    rCSI 71.3%
    PRS 96.79
  • CD14-positive, CD16-negative classical monocyte CL0002057
    CSI 12.53
    rCSI 75.78%
    PRS 95.31
  • professional antigen presenting cell CL0000145
    CSI 12.37
    rCSI 42.6%
    PRS 94.12
  • CD4-positive, alpha-beta cytotoxic T cell CL0000934
    CSI 12.28
    rCSI 16.88%
    PRS 97.76
  • mast cell CL0000097
    CSI 12.08
    rCSI 26.09%
    PRS 89.33
  • midzonal region hepatocyte CL0019028
    CSI 11.99
    rCSI 28.14%
    PRS 88.06
  • epithelial cell of lower respiratory tract CL0002632
    CSI 11.97
    rCSI 9.28%
    PRS 92.75
  • bronchus fibroblast of lung CL2000093
    CSI 11.21
    rCSI 9.11%
    PRS 89.58
  • platelet CL0000233
    CSI 10.99
    rCSI 45.61%
    PRS 87.04
  • plasmablast CL0000980
    CSI 10.68
    rCSI 8.4%
    PRS 92.64
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 10.23
    rCSI 26.66%
    PRS 91.69
  • common myeloid progenitor CL0000049
    CSI 10.01
    rCSI 8.09%
    PRS 91.5
  • precursor B cell CL0000817
    CSI 9.6
    rCSI 8.41%
    PRS 94.08
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 9.19
    rCSI 8.3%
    PRS 89.04
  • myelocyte CL0002193
    CSI 9.02
    rCSI 59.25%
    PRS 95.78
  • multi-ciliated epithelial cell CL0005012
    CSI 8.77
    rCSI 8.75%
    PRS 84.84
  • microglial cell CL0000129
    CSI 8.36
    rCSI 33.64%
    PRS 88.69
  • neutrophil CL0000775
    CSI 7.68
    rCSI 42.95%
    PRS 87.78
  • common lymphoid progenitor CL0000051
    CSI 6.72
    rCSI 8.98%
    PRS 97.37
  • double negative thymocyte CL0002489
    CSI 6.62
    rCSI 4.6%
    PRS 97.16
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 6.6
    rCSI 33.12%
    PRS 96.9
  • mature B cell CL0000785
    CSI 6.6
    rCSI 5.74%
    PRS 95.85
  • decidual natural killer cell, human CL0002343
    CSI 6.55
    rCSI 66.57%
    PRS 95.67
  • lung ciliated cell CL1000271
    CSI 6.49
    rCSI 7.51%
    PRS 84.86
  • metallothionein-positive alveolar macrophage CL4033042
    CSI 6.33
    rCSI 68.88%
    PRS 95.36
  • epithelial cell of lung CL0000082
    CSI 6.04
    rCSI 5.01%
    PRS 91.08
  • megakaryocyte CL0000556
    CSI 5.69
    rCSI 24.68%
    PRS 91.69
  • exhausted T cell CL0011025
    CSI 5.39
    rCSI 91.29%
    PRS 93.5
  • alveolar adventitial fibroblast CL4028006
    CSI 5.39
    rCSI 8.52%
    PRS 91.17
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 5.38
    rCSI 7.33%
    PRS 97.92
  • endothelial cell of pericentral hepatic sinusoid CL0019022
    CSI 4.68
    rCSI 14.41%
    PRS 92.13
  • lung resident memory CD8-positive, alpha-beta T cell CL4033039
    CSI 4.38
    rCSI 11.34%
    PRS 97.66
  • fraction A pre-pro B cell CL0002045
    CSI 4.05
    rCSI 4.64%
    PRS 94.23
  • eosinophil CL0000771
    CSI 3.87
    rCSI 25.36%
    PRS 96.83
  • tissue-resident macrophage CL0000864
    CSI 3.81
    rCSI 17.81%
    PRS 96.3
  • alpha-beta T cell CL0000789
    CSI 3.12
    rCSI 3.65%
    PRS 97.13
  • endothelial cell of placenta CL0009092
    CSI 2.84
    rCSI 14.01%
    PRS 93.98
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 2.83
    rCSI 14.61%
    PRS 97.13
  • kidney resident macrophage CL1000698
    CSI 2.28
    rCSI 45.49%
    PRS 95.89
  • pre-conventional dendritic cell CL0002010
    CSI 0.4
    rCSI 5.0%
    PRS 97.2%
  • erythroid progenitor cell CL0000038
    CSI 0.6
    rCSI 3.1%
    PRS 92.4%
  • group 2 innate lymphoid cell CL0001069
    CSI 0.8
    rCSI 4.5%
    PRS 97.7%
  • transitional stage B cell CL0000818
    CSI 1.0
    rCSI 3.3%
    PRS 97.0%
  • cytotoxic T cell CL0000910
    CSI 1.1
    rCSI 6.5%
    PRS 89.6%
  • CD8-positive, alpha-beta memory T cell, CD45RO-positive CL0001203
    CSI 1.6
    rCSI 1.9%
    PRS 71.3%
  • kidney resident macrophage CL1000698
    CSI 2.3
    rCSI 45.5%
    PRS 95.9%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 2.8
    rCSI 14.6%
    PRS 97.1%
  • endothelial cell of placenta CL0009092
    CSI 2.8
    rCSI 14.0%
    PRS 94.0%
  • alpha-beta T cell CL0000789
    CSI 3.1
    rCSI 3.7%
    PRS 97.1%
  • tissue-resident macrophage CL0000864
    CSI 3.8
    rCSI 17.8%
    PRS 96.3%
  • eosinophil CL0000771
    CSI 3.9
    rCSI 25.4%
    PRS 96.8%
  • fraction A pre-pro B cell CL0002045
    CSI 4.1
    rCSI 4.6%
    PRS 94.2%
  • lung resident memory CD8-positive, alpha-beta T cell CL4033039
    CSI 4.4
    rCSI 11.3%
    PRS 97.7%
  • endothelial cell of pericentral hepatic sinusoid CL0019022
    CSI 4.7
    rCSI 14.4%
    PRS 92.1%
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 5.4
    rCSI 7.3%
    PRS 97.9%
  • alveolar adventitial fibroblast CL4028006
    CSI 5.4
    rCSI 8.5%
    PRS 91.2%
  • exhausted T cell CL0011025
    CSI 5.4
    rCSI 91.3%
    PRS 93.5%
  • megakaryocyte CL0000556
    CSI 5.7
    rCSI 24.7%
    PRS 91.7%
  • epithelial cell of lung CL0000082
    CSI 6.0
    rCSI 5.0%
    PRS 91.1%
  • metallothionein-positive alveolar macrophage CL4033042
    CSI 6.3
    rCSI 68.9%
    PRS 95.4%
  • lung ciliated cell CL1000271
    CSI 6.5
    rCSI 7.5%
    PRS 84.9%
  • decidual natural killer cell, human CL0002343
    CSI 6.6
    rCSI 66.6%
    PRS 95.7%
  • mature B cell CL0000785
    CSI 6.6
    rCSI 5.7%
    PRS 95.9%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 6.6
    rCSI 33.1%
    PRS 96.9%
  • double negative thymocyte CL0002489
    CSI 6.6
    rCSI 4.6%
    PRS 97.2%
  • common lymphoid progenitor CL0000051
    CSI 6.7
    rCSI 9.0%
    PRS 97.4%
  • neutrophil CL0000775
    CSI 7.7
    rCSI 43.0%
    PRS 87.8%
  • microglial cell CL0000129
    CSI 8.4
    rCSI 33.6%
    PRS 88.7%
  • multi-ciliated epithelial cell CL0005012
    CSI 8.8
    rCSI 8.8%
    PRS 84.8%
  • myelocyte CL0002193
    CSI 9.0
    rCSI 59.3%
    PRS 95.8%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 9.2
    rCSI 8.3%
    PRS 89.0%
  • precursor B cell CL0000817
    CSI 9.6
    rCSI 8.4%
    PRS 94.1%
  • common myeloid progenitor CL0000049
    CSI 10.0
    rCSI 8.1%
    PRS 91.5%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 10.2
    rCSI 26.7%
    PRS 91.7%
  • plasmablast CL0000980
    CSI 10.7
    rCSI 8.4%
    PRS 92.6%
  • platelet CL0000233
    CSI 11.0
    rCSI 45.6%
    PRS 87.0%
  • bronchus fibroblast of lung CL2000093
    CSI 11.2
    rCSI 9.1%
    PRS 89.6%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 12.0
    rCSI 9.3%
    PRS 92.8%
  • midzonal region hepatocyte CL0019028
    CSI 12.0
    rCSI 28.1%
    PRS 88.1%
  • mast cell CL0000097
    CSI 12.1
    rCSI 26.1%
    PRS 89.3%
  • CD4-positive, alpha-beta cytotoxic T cell CL0000934
    CSI 12.3
    rCSI 16.9%
    PRS 97.8%
  • professional antigen presenting cell CL0000145
    CSI 12.4
    rCSI 42.6%
    PRS 94.1%
  • CD14-positive, CD16-negative classical monocyte CL0002057
    CSI 12.5
    rCSI 75.8%
    PRS 95.3%
  • myeloid dendritic cell, human CL0001057
    CSI 12.7
    rCSI 71.3%
    PRS 96.8%
  • pulmonary artery endothelial cell CL1001568
    CSI 13.5
    rCSI 18.4%
    PRS 94.5%
  • fibroblast of lung CL0002553
    CSI 13.6
    rCSI 12.6%
    PRS 91.5%
  • hepatic stellate cell CL0000632
    CSI 14.3
    rCSI 53.7%
    PRS 85.7%
  • class switched memory B cell CL0000972
    CSI 14.7
    rCSI 11.0%
    PRS 96.3%
  • erythrocyte CL0000232
    CSI 15.6
    rCSI 35.3%
    PRS 88.7%
  • colon macrophage CL0009038
    CSI 15.8
    rCSI 73.1%
    PRS 96.4%
  • memory T cell CL0000813
    CSI 16.4
    rCSI 31.6%
    PRS 97.8%
  • basophil CL0000767
    CSI 16.8
    rCSI 35.5%
    PRS 95.1%
  • lung interstitial macrophage CL4033043
    CSI 17.3
    rCSI 38.8%
    PRS 96.8%
  • glial cell CL0000125
    CSI 17.4
    rCSI 66.4%
    PRS 83.7%
  • granulocyte CL0000094
    CSI 18.3
    rCSI 28.0%
    PRS 94.2%
  • promyelocyte CL0000836
    CSI 19.4
    rCSI 28.0%
    PRS 92.4%
  • early lymphoid progenitor CL0000936
    CSI 19.9
    rCSI 17.4%
    PRS 93.2%
  • myeloid cell CL0000763
    CSI 20.3
    rCSI 83.8%
    PRS 93.1%
  • innate lymphoid cell CL0001065
    CSI 20.5
    rCSI 42.2%
    PRS 84.8%
  • natural killer cell CL0000623
    CSI 22.3
    rCSI 43.2%
    PRS 92.7%
  • intraepithelial lymphocyte CL0002496
    CSI 22.4
    rCSI 61.0%
    PRS 97.3%
  • activated CD8-positive, alpha-beta T cell CL0000906
    CSI 23.3
    rCSI 22.9%
    PRS 96.6%
  • mature T cell CL0002419
    CSI 24.6
    rCSI 19.2%
    PRS 97.1%
  • hematopoietic stem cell CL0000037
    CSI 25.4
    rCSI 16.9%
    PRS 91.7%
  • T follicular helper cell CL0002038
    CSI 25.8
    rCSI 19.3%
    PRS 96.8%
  • common dendritic progenitor CL0001029
    CSI 26.8
    rCSI 33.7%
    PRS 94.9%
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 27.0
    rCSI 28.2%
    PRS 96.0%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 28.3
    rCSI 25.7%
    PRS 97.1%
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 28.6
    rCSI 34.1%
    PRS 97.6%
  • mature NK T cell CL0000814
    CSI 29.2
    rCSI 37.3%
    PRS 94.3%
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 29.3
    rCSI 19.7%
    PRS 97.6%
  • group 3 innate lymphoid cell CL0001071
    CSI 30.8
    rCSI 23.1%
    PRS 93.6%
  • hematopoietic precursor cell CL0008001
    CSI 31.1
    rCSI 32.0%
    PRS 95.8%
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 31.3
    rCSI 23.8%
    PRS 97.8%
  • Kupffer cell CL0000091
    CSI 31.6
    rCSI 72.4%
    PRS 91.4%
  • mononuclear phagocyte CL0000113
    CSI 31.7
    rCSI 69.8%
    PRS 92.6%
  • lung macrophage CL1001603
    CSI 32.1
    rCSI 71.8%
    PRS 94.5%
  • monocyte CL0000576
    CSI 32.3
    rCSI 58.5%
    PRS 91.5%
  • macrophage CL0000235
    CSI 34.0
    rCSI 61.8%
    PRS 90.9%
  • conventional dendritic cell CL0000990
    CSI 35.2
    rCSI 29.4%
    PRS 85.3%
  • plasmacytoid dendritic cell CL0000784
    CSI 35.7
    rCSI 36.1%
    PRS 95.8%
  • inflammatory macrophage CL0000863
    CSI 35.9
    rCSI 61.4%
    PRS 97.2%
  • gamma-delta T cell CL0000798
    CSI 36.3
    rCSI 42.7%
    PRS 95.5%
  • Langerhans cell CL0000453
    CSI 36.9
    rCSI 56.4%
    PRS 95.8%
  • granulocyte monocyte progenitor cell CL0000557
    CSI 38.4
    rCSI 33.3%
    PRS 92.3%
  • Hofbauer cell CL3000001
    CSI 38.5
    rCSI 72.7%
    PRS 94.8%
  • myeloid dendritic cell CL0000782
    CSI 39.0
    rCSI 56.5%
    PRS 97.1%
  • dendritic cell, human CL0001056
    CSI 39.8
    rCSI 61.1%
    PRS 95.3%
  • dendritic cell CL0000451
    CSI 42.7
    rCSI 52.5%
    PRS 90.0%
  • intermediate monocyte CL0002393
    CSI 43.2
    rCSI 65.1%
    PRS 94.0%
  • promonocyte CL0000559
    CSI 43.5
    rCSI 74.5%
    PRS 92.3%
  • alveolar macrophage CL0000583
    CSI 45.9
    rCSI 75.6%
    PRS 92.1%
  • non-classical monocyte CL0000875
    CSI 46.9
    rCSI 75.2%
    PRS 94.8%
  • classical monocyte CL0000860
    CSI 47.4
    rCSI 70.2%
    PRS 94.9%
  • CD14-positive monocyte CL0001054
    CSI 59.8
    rCSI 74.5%
    PRS 95.4%
  • CD14-positive, CD16-positive monocyte CL0002397
    CSI 60.4
    rCSI 79.2%
    PRS 96.0%
  • alternatively activated macrophage CL0000890
    CSI 62.2
    rCSI 78.2%
    PRS 95.3%
  • myeloid leukocyte CL0000766
    CSI 62.8
    rCSI 57.9%
    PRS 91.4%
  • activated type II NK T cell CL0000931
    CSI 63.3
    rCSI 71.3%
    PRS 96.9%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

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Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [TYROBP](/details-gene/7305), also known as DAP12, is a protein-coding gene located on chromosome 19q13.12. It functions as a key transmembrane signaling adaptor protein, primarily expressed in immune cells of the myeloid and lymphoid lineages. As a molecular adaptor, [TYROBP](/details-gene/7305) lacks an intrinsic catalytic domain and instead associates with various cell surface receptors to transduce activation signals. Its function is integral to numerous processes within the innate and adaptive immune systems, including the activation of natural killer cells, monocytes, macrophages, and dendritic cells. Clinically, loss-of-function mutations in [TYROBP](/details-gene/7305) are associated with Nasu-Hakola disease ([153245](https://omim.org/entry/221770)), a rare autosomal recessive disorder characterized by presenile dementia and bone cysts ([Link](https://doi.org/10.1038/77153)). ## Cellular Roles and Expression Landscape The expression profile of [TYROBP](/details-gene/7305) underscores its central role as a signaling component in the immune system. **Overall**, the gene exhibits its highest significance in cell types crucial for innate immunity and antigen presentation. The most significant expression is observed in: * `[CD16-positive, CD56-dim natural killer cell, human](/details-cell/CL0000939)` (CSI: 104.68) * `[CD14-low, CD16-positive monocyte](/details-cell/CL0002396)` (CSI: 98.88) * `[elicited macrophage](/details-cell/CL0000861)` (CSI: 87.94) * `[CD16-negative, CD56-bright natural killer cell, human](/details-cell/CL0000938)` (CSI: 81.79) * `[plasmacytoid dendritic cell, human](/details-cell/CL0001058)` (CSI: 80.80) This pattern highlights [TYROBP](/details-gene/7305) as a defining workhorse molecule in both cytotoxic lymphocytes and professional phagocytes. Its high significance across various monocyte subsets (`[classical monocyte](/details-cell/CL0000860)`, `[non-classical monocyte](/details-cell/CL0000875)`) and macrophage types (`[alveolar macrophage](/details-cell/CL0000583)`, `[alternatively activated macrophage](/details-cell/CL0000890)`) suggests a foundational role in myeloid cell biology, extending from circulation to tissue residency. Its involvement in activating NK cells has been well-documented ([Link](https://doi.org/10.1038/35642), [Link](https://doi.org/10.1016/s1074-7613(00)80574-9)), which is strongly supported by its top ranking in these cell types. ## Pathways and Molecular Function Functionally, [TYROBP](/details-gene/7305) operates as a signaling hub, evident from its annotation as providing `[Molecular adaptor activity](/details-ontology/GO0060090)` and being a key component of the `[Dap12 signaling](/details-reactome/R-HSA-2424491)` pathway. It is localized to the `[Plasma membrane](/details-ontology/GO0005886)`, where it binds to various receptors to initiate intracellular signaling cascades. Key biological processes mediated by [TYROBP](/details-gene/7305) include: * **Immune Cell Activation:** It is central to `[Myeloid leukocyte activation](/details-ontology/GO0002274)` and `[Neutrophil activation involved in immune response](/details-ontology/GO0002283)`. It plays a role in the `[Stimulatory c-type lectin receptor signaling pathway](/details-ontology/GO0002223)` and associates with receptors like TREM-1 and MDL-1 to trigger inflammatory responses ([Link](https://doi.org/10.4049/jimmunol.164.10.4991), [Link](https://doi.org/10.1073/pnas.96.17.9792)). * **Neuro-immunology:** The gene is implicated in `[Microglial cell activation involved in immune response](/details-ontology/GO0002282)` and `[Amyloid-beta clearance](/details-ontology/GO0097242)`, highlighting a crucial role at the interface of the nervous and immune systems. This function is directly relevant to the neurological symptoms observed in Nasu-Hakola disease. * **Skeletal Homeostasis:** Its involvement in `[Osteoclast differentiation](/details-ontology/GO0030316)` provides a molecular basis for the bone cysts associated with its loss-of-function mutations. * **Signal Transduction:** As part of the `[Innate immune system](/details-reactome/R-HSA-168249)` and `[Adaptive immune system](/details-reactome/R-HSA-1280218)`, [TYROBP](/details-gene/7305) links extracellular ligand binding to downstream cellular responses, such as cytokine production (e.g., `[Positive regulation of tumor necrosis factor production](/details-ontology/GO0032760)`) and phagocytosis. ## Research Directions The established role of [TYROBP](/details-gene/7305) as a critical signaling adaptor in both the immune and nervous systems, coupled with its direct link to a human disease, presents several avenues for future research. The gene's function in linking myeloid cell activation with both neurodegeneration and bone pathology is particularly compelling. Based on the available data, several testable hypotheses can be proposed: 1. **Hypothesis 1:** Given its role in `[Amyloid-beta clearance](/details-ontology/GO0097242)`, subtle variations or age-related dysregulation of [TYROBP](/details-gene/7305) signaling in microglia may contribute to the pathogenesis of more common neurodegenerative disorders, such as late-onset Alzheimer's disease, by impairing the clearance of toxic protein aggregates. 2. **Hypothesis 2:** [TYROBP](/details-gene/7305) acts as a master regulator of osteoclast differentiation by integrating signals from multiple receptors. The bone cysts in Nasu-Hakola disease arise from a cell-autonomous defect in osteoclast precursors, leading to aberrant fusion and bone resorption activity. 3. **Hypothesis 3:** The spectrum of receptors that partner with [TYROBP](/details-gene/7305) differs significantly between distinct myeloid cell subsets (e.g., monocytes vs. microglia vs. osteoclasts), which dictates the cell-specific functional outcomes of [TYROBP](/details-gene/7305) signaling and explains the tissue-specific pathology of Nasu-Hakola disease. A key experiment to test **Hypothesis 1** could involve the use of patient-derived induced pluripotent stem cells (iPSCs). One could generate microglia-like cells from individuals with Nasu-Hakola disease (harboring [TYROBP](/details-gene/7305) mutations) and from healthy, isogenic controls. The phagocytic capacity of these cells could then be quantitatively assessed by exposing them to fluorescently labeled amyloid-beta oligomers or fibrils, with uptake measured by high-content imaging or flow cytometry. Transcriptomic and proteomic analyses of these cells upon stimulation would further reveal the specific downstream pathways that are disrupted. From a therapeutic perspective, [TYROBP](/details-gene/7305) represents a complex but promising target. In neurodegenerative contexts, strategies aimed at *activating* or enhancing [TYROBP](/details-gene/7305)-mediated signaling in microglia could be beneficial for clearing pathological protein aggregates. Conversely, in autoimmune or inflammatory conditions driven by hyperactive myeloid cells, targeted *inhibition* of specific [TYROBP](/details-gene/7305)-receptor pairs could offer a more precise anti-inflammatory strategy than broad immunosuppression.

Genular Protein ID: 3786314690

Symbol: TYOBP_HUMAN

Name: Killer-activating receptor-associated protein

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 9490415

Title: Immunoreceptor DAP12 bearing a tyrosine-based activation motif is involved in activating NK cells.

PubMed ID: 9490415

DOI: 10.1038/35642

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16344560

Title: Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.

PubMed ID: 16344560

DOI: 10.1101/gr.4039406

PubMed ID: 15057824

Title: The DNA sequence and biology of human chromosome 19.

PubMed ID: 15057824

DOI: 10.1038/nature02399

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9655483

Title: Association of DAP12 with activating CD94/NKG2C NK cell receptors.

PubMed ID: 9655483

DOI: 10.1016/s1074-7613(00)80574-9

PubMed ID: 10449773

Title: Myeloid DAP12-associating lectin (MDL)-1 is a cell surface receptor involved in the activation of myeloid cells.

PubMed ID: 10449773

DOI: 10.1073/pnas.96.17.9792

PubMed ID: 10604985

Title: Signal-regulatory protein beta 1 is a DAP12-associated activating receptor expressed in myeloid cells.

PubMed ID: 10604985

DOI: 10.4049/jimmunol.164.1.9

PubMed ID: 10888890

Title: Loss-of-function mutations in TYROBP (DAP12) result in a presenile dementia with bone cysts.

PubMed ID: 10888890

DOI: 10.1038/77153

PubMed ID: 10799849

Title: Inflammatory responses can be triggered by TREM-1, a novel receptor expressed on neutrophils and monocytes.

PubMed ID: 10799849

DOI: 10.4049/jimmunol.164.10.4991

PubMed ID: 11602640

Title: A DAP12-mediated pathway regulates expression of CC chemokine receptor 7 and maturation of human dendritic cells.

PubMed ID: 11602640

DOI: 10.1084/jem.194.8.1111

PubMed ID: 12370476

Title: Heterogeneity of presenile dementia with bone cysts (Nasu-Hakola disease): three genetic forms.

PubMed ID: 12370476

DOI: 10.1212/wnl.59.7.1105

PubMed ID: 11922939

Title: TREM-1, MDL-1, and DAP12 expression is associated with a mature stage of myeloid development.

PubMed ID: 11922939

DOI: 10.1016/s0161-5890(02)00004-4

PubMed ID: 15557162

Title: Molecular characterization of a novel immune receptor restricted to the monocytic lineage.

PubMed ID: 15557162

DOI: 10.4049/jimmunol.173.11.6703

PubMed ID: 15940674

Title: The CD94/NKG2C killer lectin-like receptor constitutes an alternative activation pathway for a subset of CD8+ T cells.

PubMed ID: 15940674

DOI: 10.1002/eji.200425843

PubMed ID: 17012248

Title: Discovery of Siglec-14, a novel sialic acid receptor undergoing concerted evolution with Siglec-5 in primates.

PubMed ID: 17012248

DOI: 10.1096/fj.06-5800com

PubMed ID: 16920917

Title: Molecular and functional characterization of CD300b, a new activating immunoglobulin receptor able to transduce signals through two different pathways.

PubMed ID: 16920917

DOI: 10.4049/jimmunol.177.5.2819

PubMed ID: 17928527

Title: Analysis of mouse LMIR5/CLM-7 as an activating receptor: differential regulation of LMIR5/CLM-7 in mouse versus human cells.

PubMed ID: 17928527

DOI: 10.1182/blood-2007-04-085787

PubMed ID: 18624290

Title: Evidence that the KIR2DS5 gene codes for a surface receptor triggering natural killer cell function.

PubMed ID: 18624290

DOI: 10.1002/eji.200838434

PubMed ID: 18957693

Title: Essential role of DAP12 signaling in macrophage programming into a fusion-competent state.

PubMed ID: 18957693

DOI: 10.1126/scisignal.1159665

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.m800588-mcp200

PubMed ID: 21727189

Title: The immunoreceptor adapter protein DAP12 suppresses B lymphocyte-driven adaptive immune responses.

PubMed ID: 21727189

DOI: 10.1084/jem.20101623

PubMed ID: 23715743

Title: DAP12 impacts trafficking and surface stability of killer immunoglobulin-like receptors on natural killer cells.

PubMed ID: 23715743

DOI: 10.1189/jlb.0213093

PubMed ID: 25957402

Title: DAP12 stabilizes the C-terminal fragment of the triggering receptor expressed on myeloid cells-2 (TREM2) and protects against LPS-induced pro-inflammatory response.

PubMed ID: 25957402

DOI: 10.1074/jbc.m115.645986

PubMed ID: 26221034

Title: Identification and Characterization of CD300H, a New Member of the Human CD300 Immunoreceptor Family.

PubMed ID: 26221034

DOI: 10.1074/jbc.m115.643361

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 26358190

Title: Siglec1 suppresses antiviral innate immune response by inducing TBK1 degradation via the ubiquitin ligase TRIM27.

PubMed ID: 26358190

DOI: 10.1038/cr.2015.108

PubMed ID: 20890284

Title: The structural basis for intramembrane assembly of an activating immunoreceptor complex.

PubMed ID: 20890284

DOI: 10.1038/ni.1943

PubMed ID: 25981043

Title: Transmembrane complexes of DAP12 crystallized in lipid membranes provide insights into control of oligomerization in immunoreceptor assembly.

PubMed ID: 25981043

DOI: 10.1016/j.celrep.2015.04.045

PubMed ID: 27658901

Title: TYROBP genetic variants in early-onset Alzheimer's disease.

PubMed ID: 27658901

DOI: 10.1016/j.neurobiolaging.2016.07.028

PubMed ID: 28716534

Title: Mutations in TYROBP are not a common cause of dementia in a Turkish cohort.

PubMed ID: 28716534

DOI: 10.1016/j.neurobiolaging.2017.06.019

Sequence Information:

  • Length: 113
  • Mass: 12179
  • Checksum: 267CB1C1756F89F0
  • Sequence:
  • MGGLEPCSRL LLLPLLLAVS GLRPVQAQAQ SDCSCSTVSP GVLAGIVMGD LVLTVLIALA 
    VYFLGRLVPR GRGAAEAATR KQRITETESP YQELQGQRSD VYSDLNTQRP YYK

Genular Protein ID: 177418576

Symbol: X6RGC9_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15057824

Title: The DNA sequence and biology of human chromosome 19.

PubMed ID: 15057824

DOI: 10.1038/nature02399

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.M800588-MCP200

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

Sequence Information:

  • Length: 101
  • Mass: 10972
  • Checksum: 63633932D40DCC95
  • Sequence:
  • MGGLEPCSRL LLLPLLLAVS DCSCSTVSPG VLAGIVMGDL VLTVLIALAV YFLGRLVPRG 
    RGAAEATRKQ RITETESPYQ ELQGQRSDVY SDLNTQRPYY K