Details for: USP4
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 211.3212
Cell Significance Index: -32.8700 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 128.2115
Cell Significance Index: -32.5200 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 83.1416
Cell Significance Index: -34.2500 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 75.6910
Cell Significance Index: -30.7500 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 67.4203
Cell Significance Index: -34.6800 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 32.3333
Cell Significance Index: -30.8700 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 27.9734
Cell Significance Index: -34.4900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 11.8745
Cell Significance Index: -31.8100 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 10.6529
Cell Significance Index: -32.7200 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 8.9102
Cell Significance Index: -35.1600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 2.1622
Cell Significance Index: 411.4800 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.5566
Cell Significance Index: 107.6500 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.5352
Cell Significance Index: 307.9600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.9949
Cell Significance Index: 76.3500 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.8988
Cell Significance Index: 39.7600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.8087
Cell Significance Index: 30.6300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.7869
Cell Significance Index: 282.2500 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.7299
Cell Significance Index: 13.4900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.7246
Cell Significance Index: 143.7900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.7215
Cell Significance Index: 130.0600 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.7016
Cell Significance Index: 76.3200 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.6305
Cell Significance Index: 102.5400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.6125
Cell Significance Index: 71.3800 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.6066
Cell Significance Index: 74.5900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.5921
Cell Significance Index: 409.5200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5657
Cell Significance Index: 55.9600 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.5138
Cell Significance Index: 11.2500 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.4917
Cell Significance Index: 13.7400 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.4776
Cell Significance Index: 431.2300 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.4542
Cell Significance Index: 25.4900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.3479
Cell Significance Index: 41.0300 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.3254
Cell Significance Index: 16.9500 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.3068
Cell Significance Index: 8.8400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.2783
Cell Significance Index: 18.7100 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.2658
Cell Significance Index: 17.1500 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.2336
Cell Significance Index: 14.3600 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.1957
Cell Significance Index: 4.2400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.1871
Cell Significance Index: 25.6900 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1843
Cell Significance Index: 100.6500 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.1322
Cell Significance Index: 2.5800 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1301
Cell Significance Index: 57.5200 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0909
Cell Significance Index: 4.1200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.0855
Cell Significance Index: 4.4400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0819
Cell Significance Index: 3.8200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0590
Cell Significance Index: 111.0500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0507
Cell Significance Index: 8.6600 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0440
Cell Significance Index: 81.0600 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0362
Cell Significance Index: 16.4400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0351
Cell Significance Index: 53.9900 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0325
Cell Significance Index: 20.6100 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0193
Cell Significance Index: 2.4700 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0093
Cell Significance Index: 0.1600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0088
Cell Significance Index: 11.9100 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0071
Cell Significance Index: -0.1900 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0148
Cell Significance Index: -9.2700 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0186
Cell Significance Index: -13.8100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0243
Cell Significance Index: -17.8000 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.0249
Cell Significance Index: -0.7300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0320
Cell Significance Index: -24.2400 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0323
Cell Significance Index: -3.3000 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0364
Cell Significance Index: -20.5500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0399
Cell Significance Index: -5.8000 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.0454
Cell Significance Index: -0.3700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0651
Cell Significance Index: -3.0600 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0705
Cell Significance Index: -1.9200 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0773
Cell Significance Index: -9.9900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0955
Cell Significance Index: -10.9500 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.1053
Cell Significance Index: -2.2500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1062
Cell Significance Index: -30.5500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1068
Cell Significance Index: -22.5000 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.1222
Cell Significance Index: -1.1300 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1545
Cell Significance Index: -4.1400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1684
Cell Significance Index: -12.5500 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.1924
Cell Significance Index: -2.8400 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.2254
Cell Significance Index: -25.7300 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.2259
Cell Significance Index: -15.9800 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.2377
Cell Significance Index: -5.7000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.2529
Cell Significance Index: -13.2800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.2630
Cell Significance Index: -6.7600 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.2650
Cell Significance Index: -16.7100 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2727
Cell Significance Index: -28.3900 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2844
Cell Significance Index: -9.1100 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.3050
Cell Significance Index: -8.0200 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.3165
Cell Significance Index: -11.1200 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.3302
Cell Significance Index: -6.8500 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3847
Cell Significance Index: -30.4700 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.3932
Cell Significance Index: -11.2200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.3940
Cell Significance Index: -13.6900 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.4058
Cell Significance Index: -24.8800 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.4150
Cell Significance Index: -6.9500 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.4632
Cell Significance Index: -9.8300 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.4632
Cell Significance Index: -6.3200 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.4691
Cell Significance Index: -9.9900 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.4957
Cell Significance Index: -7.1300 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.5659
Cell Significance Index: -15.1400 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.6005
Cell Significance Index: -15.3400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.6228
Cell Significance Index: -20.3900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.6344
Cell Significance Index: -20.2100 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.6886
Cell Significance Index: -19.7400 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.7398
Cell Significance Index: -25.9200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 942812366
Symbol: UBP4_HUMAN
Name: Ubiquitin carboxyl-terminal hydrolase 4
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7784062
Title: Elevated expression of Unph, a proto-oncogene at 3p21.3, in human lung tumors.
PubMed ID: 7784062
PubMed ID: 9464533
Title: The human UNP locus at 3p21.31 encodes two tissue-selective, cytoplasmic isoforms with deubiquitinating activity that have reduced expression in small cell lung carcinoma cell lines.
PubMed ID: 9464533
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16641997
Title: The DNA sequence, annotation and analysis of human chromosome 3.
PubMed ID: 16641997
DOI: 10.1038/nature04728
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11571652
Title: The de-ubiquitinating enzyme Unp interacts with the retinoblastoma protein.
PubMed ID: 11571652
PubMed ID: 16316627
Title: Oncogenic protein UnpEL/Usp4 deubiquitinates Ro52 by its isopeptidase activity.
PubMed ID: 16316627
PubMed ID: 16472766
Title: UnpEL/Usp4 is ubiquitinated by Ro52 and deubiquitinated by itself.
PubMed ID: 16472766
PubMed ID: 16339847
Title: The ubiquitin-specific protease Usp4 regulates the cell surface level of the A2A receptor.
PubMed ID: 16339847
PubMed ID: 20595234
Title: The Prp19 complex and the Usp4Sart3 deubiquitinating enzyme control reversible ubiquitination at the spliceosome.
PubMed ID: 20595234
DOI: 10.1101/gad.1925010
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21415856
Title: Ubiquitin-specific protease 4 is inhibited by its ubiquitin-like domain.
PubMed ID: 21415856
PubMed ID: 24398133
Title: Retraction: 'Ubiquitin-specific protease 4 is inhibited by its ubiquitin-like domain' by MP Luna-Vargas, AC Faesen, WJ van Dijk, M Rape, A Fish, TK Sixma.
PubMed ID: 24398133
PubMed ID: 22347420
Title: Ubiquitin-specific protease 4 inhibits mono-ubiquitination of the master growth factor signaling kinase PDK1.
PubMed ID: 22347420
PubMed ID: 28604766
Title: The deubiquitinating enzymes USP4 and USP17 target hyaluronan synthase 2 and differentially affect its function.
PubMed ID: 28604766
PubMed ID: 30514904
Title: Ubiquitination of Rheb governs growth factor-induced mTORC1 activation.
PubMed ID: 30514904
PubMed ID: 25404403
Title: The DUSP-Ubl domain of USP4 enhances its catalytic efficiency by promoting ubiquitin exchange.
PubMed ID: 25404403
DOI: 10.1038/ncomms6399
Sequence Information:
- Length: 963
- Mass: 108565
- Checksum: 63055C9ADFE36713
- Sequence:
MAEGGGCRER PDAETQKSEL GPLMRTTLQR GAQWYLIDSR WFKQWKKYVG FDSWDMYNVG EHNLFPGPID NSGLFSDPES QTLKEHLIDE LDYVLVPTEA WNKLLNWYGC VEGQQPIVRK VVEHGLFVKH CKVEVYLLEL KLCENSDPTN VLSCHFSKAD TIATIEKEMR KLFNIPAERE TRLWNKYMSN TYEQLSKLDN TVQDAGLYQG QVLVIEPQNE DGTWPRQTLQ SKSSTAPSRN FTTSPKSSAS PYSSVSASLI ANGDSTSTCG MHSSGVSRGG SGFSASYNCQ EPPSSHIQPG LCGLGNLGNT CFMNSALQCL SNTAPLTDYF LKDEYEAEIN RDNPLGMKGE IAEAYAELIK QMWSGRDAHV APRMFKTQVG RFAPQFSGYQ QQDSQELLAF LLDGLHEDLN RVKKKPYLEL KDANGRPDAV VAKEAWENHR LRNDSVIVDT FHGLFKSTLV CPECAKVSVT FDPFCYLTLP LPLKKDRVME VFLVPADPHC RPTQYRVTVP LMGAVSDLCE ALSRLSGIAA ENMVVADVYN HRFHKIFQMD EGLNHIMPRD DIFVYEVCST SVDGSECVTL PVYFRERKSR PSSTSSASAL YGQPLLLSVP KHKLTLESLY QAVCDRISRY VKQPLPDEFG SSPLEPGACN GSRNSCEGED EEEMEHQEEG KEQLSETEGS GEDEPGNDPS ETTQKKIKGQ PCPKRLFTFS LVNSYGTADI NSLAADGKLL KLNSRSTLAM DWDSETRRLY YDEQESEAYE KHVSMLQPQK KKKTTVALRD CIELFTTMET LGEHDPWYCP NCKKHQQATK KFDLWSLPKI LVVHLKRFSY NRYWRDKLDT VVEFPIRGLN MSEFVCNLSA RPYVYDLIAV SNHYGAMGVG HYTAYAKNKL NGKWYYFDDS NVSLASEDQI VTKAAYVLFY QRRDDEFYKT PSLSSSGSSD GGTRPSSSQQ GFGDDEACSM DTN
Genular Protein ID: 4145121639
Symbol: Q08AK7_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 963
- Mass: 108523
- Checksum: DE745C9ADFE36716
- Sequence:
MAEGGGCRER PDAETQKSEL GPLMRTTLQR GAQWYLIDSR WFKQWKKYVG FDSWDMYNVG EHNLFPGPID NSGLFSDPES QTLKEHLIDE LDYVLVPTEA WNKLLNWYGC VEGQQPIVRK VVEHGLFVKH CKVEVYLLEL KLCENSDPTN VLSCHFSKAD TIATIEKEMR KLFNIPAERE TRLWNKYMSN TYEQLSKLDN TVQDAGLYQG QVLVIEPQNE DGTWPRQTLQ SKSSTAPSRN FTTSPKSSAS PYSSVSASLI ANGDSTSTCG MHSSGVSRGG SGFSASYNCQ EPPSSHIQPG LCGLGNLGNT CFMNSALQCL SNTAPLTDYF LKDEYEAEIN RDNPLGMKGE IAEAYAELIK QMWSGRDAHV APRMFKTQVG RFAPQFSGYQ QQDSQELLAF LLDGLHEDLN RVKKKPYLEL KDANGRPDAV VAKEAWENHR LRNDSVIVDT FHGLFKSTLG CPECAKVSVT FDPFCYLTLP LPLKKDRVME VFLVPADPHC RPTQYRVTVP LMGAVSDLCE ALSRLSGIAA ENMVVADVYN HRFHKIFQMD EGLNHIMPRD DIFVYEVCST SVDGSECVTL PVYFRERKSR PSSTSSASAL YGQPLLLSVP KHKLTLESLY QAVCDRISRY VKQPLPDEFG SSPLEPGACN GSRNSCEGED EEEMEHQEEG KEQLSETEGS GEDEPGNDPS ETTQKKIKGQ PCPKRLFTFS LVNSYGTADI NSLAADGKLL KLNSRSTLAM DWDSETRRLY YDEQESEAYE KHVSMLQPQK KKKTTVALRD CIELFTTMET LGEHDPWYCP NCKKHQQATK KFDLWSLPKI LVVHLKRFSY NRYWRDKLDT VVEFPIRGLN MSEFVCNLSA RPYVYDLIAV SNHYGAMGVG HYTAYAKNKL NGKWYYFDDS NVSLASEDQI VTKAAYVLFY QRRDDEFYKT PSLSSSGSSD GGTRPSSSQQ GFGDDEACSM DTN
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.