Details for: PRDM2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 421.0994
Cell Significance Index: -65.5000 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 254.9248
Cell Significance Index: -64.6600 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 144.7929
Cell Significance Index: -68.3600 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 134.1638
Cell Significance Index: -54.5100 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 125.1591
Cell Significance Index: -64.3800 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 57.1410
Cell Significance Index: -54.5600 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 54.5437
Cell Significance Index: -67.2500 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 23.0938
Cell Significance Index: -61.8700 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 17.8450
Cell Significance Index: -54.8100 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 17.1235
Cell Significance Index: -67.5700 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 14.3746
Cell Significance Index: -31.4600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.3922
Cell Significance Index: 479.8800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 2.2149
Cell Significance Index: 30.2200 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 1.9490
Cell Significance Index: 125.7400 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.9035
Cell Significance Index: 131.6400 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.9001
Cell Significance Index: 53.1000 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 1.7487
Cell Significance Index: 44.9500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.3225
Cell Significance Index: 101.4900 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.2986
Cell Significance Index: 465.8000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.2267
Cell Significance Index: 150.8300 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.1828
Cell Significance Index: 66.3700 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 1.1816
Cell Significance Index: 213.0100 - Cell Name: preadipocyte (CL0002334)
Fold Change: 1.1390
Cell Significance Index: 22.2300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.8917
Cell Significance Index: 54.8100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.8745
Cell Significance Index: 604.8700 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.8299
Cell Significance Index: 36.7100 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.8013
Cell Significance Index: 87.1600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.7418
Cell Significance Index: 28.0900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.7006
Cell Significance Index: 139.0400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.6874
Cell Significance Index: 94.4100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.6778
Cell Significance Index: 35.2100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.6516
Cell Significance Index: 39.1200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5167
Cell Significance Index: 466.5700 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.4423
Cell Significance Index: 43.7500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.4369
Cell Significance Index: 193.1900 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.4146
Cell Significance Index: 11.2900 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.4134
Cell Significance Index: 778.4700 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.4053
Cell Significance Index: 221.3400 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.3902
Cell Significance Index: 20.3300 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.3709
Cell Significance Index: 43.7400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.3361
Cell Significance Index: 9.6900 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.3356
Cell Significance Index: 9.6200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.2996
Cell Significance Index: 6.4900 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.2743
Cell Significance Index: 44.6200 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.2192
Cell Significance Index: 9.9400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1896
Cell Significance Index: 8.8400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.1650
Cell Significance Index: 7.7600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1190
Cell Significance Index: 22.6400 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.1084
Cell Significance Index: 2.6000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.1014
Cell Significance Index: 46.0100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0904
Cell Significance Index: 1.5500 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0819
Cell Significance Index: 52.0500 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.0585
Cell Significance Index: 0.7200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0469
Cell Significance Index: 6.0100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0283
Cell Significance Index: 43.5400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0277
Cell Significance Index: 51.1000 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0216
Cell Significance Index: 29.3100 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0213
Cell Significance Index: 0.7500 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0060
Cell Significance Index: 0.1600 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.0048
Cell Significance Index: 0.3200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0204
Cell Significance Index: -3.4800 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0246
Cell Significance Index: -15.3600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0277
Cell Significance Index: -20.5300 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0390
Cell Significance Index: -4.4500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0398
Cell Significance Index: -5.7800 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0400
Cell Significance Index: -2.8300 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0543
Cell Significance Index: -39.8000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0783
Cell Significance Index: -59.2800 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0842
Cell Significance Index: -47.4900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1503
Cell Significance Index: -7.8900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1541
Cell Significance Index: -17.6500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1781
Cell Significance Index: -37.5100 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1889
Cell Significance Index: -24.4100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.2008
Cell Significance Index: -57.7900 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.2071
Cell Significance Index: -13.0500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2141
Cell Significance Index: -24.9600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.2205
Cell Significance Index: -16.4400 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.3064
Cell Significance Index: -31.3000 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.3426
Cell Significance Index: -3.1600 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.4131
Cell Significance Index: -10.0800 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: -0.4436
Cell Significance Index: -6.3700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.5177
Cell Significance Index: -53.9100 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.5929
Cell Significance Index: -12.3000 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.7177
Cell Significance Index: -20.4800 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.7278
Cell Significance Index: -57.6400 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.7752
Cell Significance Index: -24.8300 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.8503
Cell Significance Index: -18.1800 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.8638
Cell Significance Index: -18.9200 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.8965
Cell Significance Index: -23.9800 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.9343
Cell Significance Index: -5.6500 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.9772
Cell Significance Index: -20.7400 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.9841
Cell Significance Index: -60.3400 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -1.0071
Cell Significance Index: -12.0100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -1.0089
Cell Significance Index: -16.8900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -1.0205
Cell Significance Index: -33.4100 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -1.0282
Cell Significance Index: -15.1800 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -1.0354
Cell Significance Index: -32.9800 - Cell Name: granulosa cell (CL0000501)
Fold Change: -1.1903
Cell Significance Index: -31.3000 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -1.2259
Cell Significance Index: -24.2400 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -1.2570
Cell Significance Index: -43.6800
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1162951212
Symbol: PRDM2_HUMAN
Name: PR domain zinc finger protein 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7538672
Title: The retinoblastoma protein binds to RIZ, a zinc-finger protein that shares an epitope with the adenovirus E1A protein.
PubMed ID: 7538672
PubMed ID: 9006946
Title: The retinoblastoma interacting zinc finger gene RIZ produces a PR domain-lacking product through an internal promoter.
PubMed ID: 9006946
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7590293
Title: Identification and cloning of the G3B cDNA encoding a 3' segment of a protein binding to GATA-3.
PubMed ID: 7590293
PubMed ID: 8654390
Title: cDNA cloning of a novel protein containing two zinc-finger domains that may function as a transcription factor for the human heme-oxygenase-1 gene.
PubMed ID: 8654390
PubMed ID: 14633678
Title: Inactivation of a histone methyltransferase by mutations in human cancers.
PubMed ID: 14633678
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25755297
Title: System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.
PubMed ID: 25755297
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 18082620
Title: Structural studies of the SET domain from RIZ1 tumor suppressor.
PubMed ID: 18082620
PubMed ID: 20084102
Title: Structural biology of human H3K9 methyltransferases.
PubMed ID: 20084102
Sequence Information:
- Length: 1718
- Mass: 188915
- Checksum: 536BD68667AFE433
- Sequence:
MNQNTTEPVA ATETLAEVPE HVLRGLPEEV RLFPSAVDKT RIGVWATKPI LKGKKFGPFV GDKKKRSQVK NNVYMWEVYY PNLGWMCIDA TDPEKGNWLR YVNWACSGEE QNLFPLEINR AIYYKTLKPI APGEELLVWY NGEDNPEIAA AIEEERASAR SKRSSPKSRK GKKKSQENKN KGNKIQDIQL KTSEPDFTSA NMRDSAEGPK EDEEKPSASA LEQPATLQEV ASQEVPPELA TPAPAWEPQP EPDERLEAAA CEVNDLGEEE EEEEEEDEEE EEDDDDDELE DEGEEEASMP NENSVKEPEI RCDEKPEDLL EEPKTTSEET LEDCSEVTPA MQIPRTKEEA NGDVFETFMF PCQHCERKFT TKQGLERHMH IHISTVNHAF KCKYCGKAFG TQINRRRHER RHEAGLKRKP SQTLQPSEDL ADGKASGENV ASKDDSSPPS LGPDCLIMNS EKASQDTINS SVVEENGEVK ELHPCKYCKK VFGTHTNMRR HQRRVHERHL IPKGVRRKGG LEEPQPPAEQ AQATQNVYVP STEPEEEGEA DDVYIMDISS NISENLNYYI DGKIQTNNNT SNCDVIEMES ASADLYGINC LLTPVTVEIT QNIKTTQVPV TEDLPKEPLG STNSEAKKRR TASPPALPKI KAETDSDPMV PSCSLSLPLS ISTTEAVSFH KEKSVYLSSK LKQLLQTQDK LTPAGISATE IAKLGPVCVS APASMLPVTS SRFKRRTSSP PSSPQHSPAL RDFGKPSDGK AAWTDAGLTS KKSKLESHSD SPAWSLSGRD ERETVSPPCF DEYKMSKEWT ASSAFSSVCN QQPLDLSSGV KQKAEGTGKT PVQWESVLDL SVHKKHCSDS EGKEFKESHS VQPTCSAVKK RKPTTCMLQK VLLNEYNGID LPVENPADGT RSPSPCKSLE AQPDPDLGPG SGFPAPTVES TPDVCPSSPA LQTPSLSSGQ LPPLLIPTDP SSPPPCPPVL TVATPPPPLL PTVPLPAPSS SASPHPCPSP LSNATAQSPL PILSPTVSPS PSPIPPVEPL MSAASPGPPT LSSSSSSSSS SSSFSSSSSS SSPSPPPLSA ISSVVSSGDN LEASLPMISF KQEELENEGL KPREEPQSAA EQDVVVQETF NKNFVCNVCE SPFLSIKDLT KHLSIHAEEW PFKCEFCVQL FKDKTDLSEH RFLLHGVGNI FVCSVCKKEF AFLCNLQQHQ RDLHPDKVCT HHEFESGTLR PQNFTDPSKA HVEHMQSLPE DPLETSKEEE ELNDSSEELY TTIKIMASGI KTKDPDVRLG LNQHYPSFKP PPFQYHHRNP MGIGVTATNF TTHNIPQTFT TAIRCTKCGK GVDNMPELHK HILACASASD KKRYTPKKNP VPLKQTVQPK NGVVVLDNSG KNAFRRMGQP KRLNFSVELS KMSSNKLKLN ALKKKNQLVQ KAILQKNKSA KQKADLKNAC ESSSHICPYC NREFTYIGSL NKHAAFSCPK KPLSPPKKKV SHSSKKGGHS SPASSDKNSN SNHRRRTADA EIKMQSMQTP LGKTRARSSG PTQVPLPSSS FRSKQNVKFA ASVKSKKPSS SSLRNSSPIR MAKITHVEGK KPKAVAKNHS AQLSSKTSRS LHVRVQKSKA VLQSKSTLAS KKRTDRFNIK SRERSGGPVT RSLQLAAAAD LSENKREDGS AKQELKDFSY SLRLASRCSP PAAPYITRQY RKVKAPAAAQ FQGPFFKE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.