Details for: ERCC4
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: germ cell (CL0000586)
Fold Change: 1.6
Marker Score: 2794 - Cell Name: mural cell (CL0008034)
Fold Change: 1.47
Marker Score: 168679 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.23
Marker Score: 19269 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.06
Marker Score: 1631 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71742 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47966 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30399 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 0.97
Marker Score: 778 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2403 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.94
Marker Score: 483 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 0.94
Marker Score: 8037 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.93
Marker Score: 439 - Cell Name: gut endothelial cell (CL0000131)
Fold Change: 0.91
Marker Score: 326 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.91
Marker Score: 2717 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.88
Marker Score: 1787 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5287 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.87
Marker Score: 4956 - Cell Name: neuron (CL0000540)
Fold Change: 0.87
Marker Score: 3527 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 308 - Cell Name: oogonial cell (CL0000024)
Fold Change: 0.85
Marker Score: 1228 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.84
Marker Score: 51634 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 0.82
Marker Score: 30360 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 0.81
Marker Score: 8397 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.81
Marker Score: 4841 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 0.8
Marker Score: 7637 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.79
Marker Score: 1870 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
Fold Change: 0.79
Marker Score: 6834 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.78
Marker Score: 717 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1262 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.77
Marker Score: 368 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.75
Marker Score: 572.5 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.75
Marker Score: 300 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.74
Marker Score: 446 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 0.73
Marker Score: 6868 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.72
Marker Score: 375 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.72
Marker Score: 224 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7
Marker Score: 2938 - Cell Name: brush cell (CL0002204)
Fold Change: 0.67
Marker Score: 611 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.66
Marker Score: 170 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.66
Marker Score: 2558 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.66
Marker Score: 212 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.65
Marker Score: 13874 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.64
Marker Score: 185 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 0.63
Marker Score: 1722 - Cell Name: multi-ciliated epithelial cell (CL0005012)
Fold Change: 0.62
Marker Score: 1176 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.62
Marker Score: 1306 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 0.62
Marker Score: 23375 - Cell Name: Leydig cell (CL0000178)
Fold Change: 0.6
Marker Score: 650 - Cell Name: oocyte (CL0000023)
Fold Change: 0.6
Marker Score: 148 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 0.6
Marker Score: 8919 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 0.59
Marker Score: 11746 - Cell Name: ciliated cell (CL0000064)
Fold Change: 0.58
Marker Score: 1989 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 0.58
Marker Score: 2392 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.57
Marker Score: 689 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.56
Marker Score: 706.5 - Cell Name: ependymal cell (CL0000065)
Fold Change: 0.56
Marker Score: 195 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.55
Marker Score: 6171 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.54
Marker Score: 431 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.54
Marker Score: 2000 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.54
Marker Score: 357 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.52
Marker Score: 453 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.52
Marker Score: 2043 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.52
Marker Score: 5229 - Cell Name: neural cell (CL0002319)
Fold Change: 0.52
Marker Score: 249 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.51
Marker Score: 215 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 0.51
Marker Score: 2373 - Cell Name: ciliated epithelial cell (CL0000067)
Fold Change: 0.51
Marker Score: 232 - Cell Name: lung ciliated cell (CL1000271)
Fold Change: 0.51
Marker Score: 240 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.5
Marker Score: 322.5 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.5
Marker Score: 221 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.5
Marker Score: 1133 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.49
Marker Score: 17091 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.49
Marker Score: 512 - Cell Name: peripheral nervous system neuron (CL2000032)
Fold Change: 0.49
Marker Score: 553 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 0.49
Marker Score: 521 - Cell Name: Sertoli cell (CL0000216)
Fold Change: 0.49
Marker Score: 2918 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 0.49
Marker Score: 3769 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.49
Marker Score: 130 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 0.49
Marker Score: 204 - Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
Fold Change: 0.48
Marker Score: 163 - Cell Name: Unknown (CL0002371)
Fold Change: 0.48
Marker Score: 515 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 0.48
Marker Score: 139 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.48
Marker Score: 1860 - Cell Name: secretory cell (CL0000151)
Fold Change: 0.48
Marker Score: 870 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.47
Marker Score: 139 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.46
Marker Score: 310 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.46
Marker Score: 189 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 0.45
Marker Score: 340 - Cell Name: basal cell of epithelium of trachea (CL1000348)
Fold Change: 0.45
Marker Score: 3364 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 0.45
Marker Score: 183 - Cell Name: hepatocyte (CL0000182)
Fold Change: 0.45
Marker Score: 305 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.45
Marker Score: 141 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.44
Marker Score: 1819 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 0.44
Marker Score: 252 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.44
Marker Score: 115 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 0.44
Marker Score: 232 - Cell Name: pro-B cell (CL0000826)
Fold Change: 0.44
Marker Score: 424 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.43
Marker Score: 737 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.43
Marker Score: 904 - Cell Name: decidual cell (CL2000002)
Fold Change: 0.43
Marker Score: 1834
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Other Information
Genular Protein ID: 2802708318
Symbol: XPF_HUMAN
Name: DNA repair endonuclease XPF
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8887684
Title: ERCC4 (XPF) encodes a human nucleotide excision repair protein with eukaryotic recombination homologs.
PubMed ID: 8887684
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8797827
Title: Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease.
PubMed ID: 8797827
PubMed ID: 10447254
Title: A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy.
PubMed ID: 10447254
DOI: 10.1002/(sici)1098-1004(1999)14:1<9::aid-humu2>3.0.co;2-6
PubMed ID: 10413517
Title: Domain mapping of the DNA binding, endonuclease, and ERCC1 binding properties of the human DNA repair protein XPF.
PubMed ID: 10413517
DOI: 10.1021/bi990591+
PubMed ID: 11790111
Title: Contribution of XPF functional domains to the 5' and 3' incisions produced at the site of a psoralen interstrand cross-link.
PubMed ID: 11790111
DOI: 10.1021/bi011614z
PubMed ID: 19596235
Title: Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair.
PubMed ID: 19596235
PubMed ID: 19596236
Title: Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases.
PubMed ID: 19596236
PubMed ID: 19595721
Title: Coordination of structure-specific nucleases by human SLX4/BTBD12 is required for DNA repair.
PubMed ID: 19595721
PubMed ID: 19595722
Title: Drosophila MUS312 and the vertebrate ortholog BTBD12 interact with DNA structure-specific endonucleases in DNA repair and recombination.
PubMed ID: 19595722
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 25538220
Title: USP45 deubiquitylase controls ERCC1-XPF endonuclease-mediated DNA damage responses.
PubMed ID: 25538220
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 32034146
Title: Acetylation of XPF by TIP60 facilitates XPF-ERCC1 complex assembly and activation.
PubMed ID: 32034146
PubMed ID: 16076955
Title: Crystal structure and DNA binding functions of ERCC1, a subunit of the DNA structure-specific endonuclease XPF-ERCC1.
PubMed ID: 16076955
PubMed ID: 16338413
Title: The structure of the human ERCC1/XPF interaction domains reveals a complementary role for the two proteins in nucleotide excision repair.
PubMed ID: 16338413
PubMed ID: 9485007
Title: Nonconservative amino acid substitution variants exist at polymorphic frequency in DNA repair genes in healthy humans.
PubMed ID: 9485007
PubMed ID: 9580660
Title: Characterization of molecular defects in Xeroderma pigmentosum group F in relation to its clinically mild symptoms.
PubMed ID: 9580660
DOI: 10.1093/hmg/7.6.969
PubMed ID: 9579555
Title: Homozygous R788W point mutation in the XPF gene of a patient with xeroderma pigmentosum and late-onset neurologic disease.
PubMed ID: 9579555
PubMed ID: 10479728
Title: Polymorphisms in the human DNA repair gene XPF.
PubMed ID: 10479728
PubMed ID: 17183314
Title: A new progeroid syndrome reveals that genotoxic stress suppresses the somatotroph axis.
PubMed ID: 17183314
DOI: 10.1038/nature05456
PubMed ID: 23623386
Title: Mutations in ERCC4, encoding the DNA-repair endonuclease XPF, cause Fanconi anemia.
PubMed ID: 23623386
PubMed ID: 23623389
Title: Malfunction of nuclease ERCC1-XPF results in diverse clinical manifestations and causes Cockayne syndrome, xeroderma pigmentosum, and Fanconi anemia.
PubMed ID: 23623389
PubMed ID: 24027083
Title: Evaluation of rare variants in the new fanconi anemia gene ERCC4 (FANCQ) as familial breast/ovarian cancer susceptibility alleles.
PubMed ID: 24027083
DOI: 10.1002/humu.22438
Sequence Information:
- Length: 916
- Mass: 104486
- Checksum: C58CDE900378CCA8
- Sequence:
MESGQPARRI AMAPLLEYER QLVLELLDTD GLVVCARGLG ADRLLYHFLQ LHCHPACLVL VLNTQPAEEE YFINQLKIEG VEHLPRRVTN EITSNSRYEV YTQGGVIFAT SRILVVDFLT DRIPSDLITG ILVYRAHRII ESCQEAFILR LFRQKNKRGF IKAFTDNAVA FDTGFCHVER VMRNLFVRKL YLWPRFHVAV NSFLEQHKPE VVEIHVSMTP TMLAIQTAIL DILNACLKEL KCHNPSLEVE DLSLENAIGK PFDKTIRHYL DPLWHQLGAK TKSLVQDLKI LRTLLQYLSQ YDCVTFLNLL ESLRATEKAF GQNSGWLFLD SSTSMFINAR ARVYHLPDAK MSKKEKISEK MEIKEGEETK KELVLESNPK WEALTEVLKE IEAENKESEA LGGPGQVLIC ASDDRTCSQL RDYITLGAEA FLLRLYRKTF EKDSKAEEVW MKFRKEDSSK RIRKSHKRPK DPQNKERAST KERTLKKKKR KLTLTQMVGK PEELEEEGDV EEGYRREISS SPESCPEEIK HEEFDVNLSS DAAFGILKEP LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG KPLRVYFLIY GGSTEEQRYL TALRKEKEAF EKLIREKASM VVPEEREGRD ETNLDLVRGT ASADVSTDTR KAGGQEQNGT QQSIVVDMRE FRSELPSLIH RRGIDIEPVT LEVGDYILTP EMCVERKSIS DLIGSLNNGR LYSQCISMSR YYKRPVLLIE FDPSKPFSLT SRGALFQEIS SNDISSKLTL LTLHFPRLRI LWCPSPHATA ELFEELKQSK PQPDAATALA ITADSETLPE SEKYNPGPQD FLLKMPGVNA KNCRSLMHHV KNIAELAALS QDELTSILGN AANAKQLYDF IHTSFAEVVS KGKGKK
Genular Protein ID: 1868716255
Symbol: B4DXD8_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 466
- Mass: 52842
- Checksum: 70DB1C4D44A280F9
- Sequence:
MKFRKEDSSK RIRKSHKRPK DPQNKERAST KERTLKKKKR KLTLTQMVGK PEELEEEGDV EEGYRREISS SPESCPEEIK HEEFDVNLSS DAAFGILKEP LTIIHPLLGC SDPYALTRVL HEVEPRYVVL YDAELTFVRQ LEIYRASRPG KPLRVYFLIY GGSTEEQRYL TALRKEKEAF EKLIREKASM VVPEEREGRD ETNLDLVRGT ASADVSTDTR KAGGQEQNGT QQSIVVDMRE FRSELPSLIH RRGIDIEPVT LEVGDYILTP EMCVERKSIS DLIGSLNNGR LYSQCISMSR YYKRPVLLIE FDPSKPFSLT SRGALFQEIS SNDISSKLTL LTLHFPRLRI LWCPSPHATA ELFEELKQSK PQPDAATALA ITADSETLPE SEKYNPGPQD FLLKMPGVNA KNCRSLMHHV KNIAELAALS QDELTSILGN AANAKQLYDF IHTSFAEVVS KGKGKK
Genular Protein ID: 3234413639
Symbol: A0A804HKF9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
Sequence Information:
- Length: 962
- Mass: 109645
- Checksum: B18BEFEA803BC624
- Sequence:
MESGQPARRI AMAPLLEYER QLVLELLDTD GLVVCARGLG ADRLLYHFLQ LHCHPACLVL VLNTQPAEEE YFINQLKIEG VEHLPRRVTN EITSNSRYEV YTQGGVIFAT SRILVVDFLT DRIPSDLITE ILPLTCQKHP TPGPVPSLSP QPGSLELSWP RWSQGSIQPL FRYHLGILVY RAHRIIESCQ EAFILRLFRQ KNKRGFIKAF TDNAVAFDTG FCHVERVMRN LFVRKLYLWP RFHVAVNSFL EQHKPEVVEI HVSMTPTMLA IQTAILDILN ACLKELKCHN PSLEVEDLSL ENAIGKPFDK TIRHYLDPLW HQLGAKTKSL VQDLKILRTL LQYLSQYDCV TFLNLLESLR ATEKAFGQNS GWLFLDSSTS MFINARARVY HLPDAKMSKK EKISEKMEIK EGEETKKELV LESNPKWEAL TEVLKEIEAE NKESEALGGP GQVLICASDD RTCSQLRDYI TLGAEAFLLR LYRKTFEKDS KAEEVWMKFR KEDSSKRIRK SHKRPKDPQN KERASTKERT LKKKKRKLTL TQMVGKPEEL EEEGDVEEGY RREISSSPES CPEEIKHEEF DVNLSSDAAF GILKEPLTII HPLLGCSDPY ALTRVLHEVE PRYVVLYDAE LTFVRQLEIY RASRPGKPLR VYFLIYGGST EEQRYLTALR KEKEAFEKLI REKASMVVPE EREGRDETNL DLVRGTASAD VSTDTRKAGG QEQNGTQQSI VVDMREFRSE LPSLIHRRGI DIEPVTLEVG DYILTPEMCV ERKSISDLIG SLNNGRLYSQ CISMSRYYKR PVLLIEFDPS KPFSLTSRGA LFQEISSNDI SSKLTLLTLH FPRLRILWCP SPHATAELFE ELKQSKPQPD AATALAITAD SETLPESEKY NPGPQDFLLK MPGVNAKNCR SLMHHVKNIA ELAALSQDEL TSILGNAANA KQLYDFIHTS FAEVVSKGKG KK
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.