Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 42.0669
Cell Significance Index: -10.6700 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 38.7932
Cell Significance Index: -15.7600 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 38.4434
Cell Significance Index: -18.1500 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 35.3237
Cell Significance Index: -18.1700 - Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 30.4092
Cell Significance Index: -4.7300 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 27.0334
Cell Significance Index: -18.1400 - Cell Name: basophilic erythroblast (CL0000549)
Fold Change: 17.4130
Cell Significance Index: 7.9300 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 16.6223
Cell Significance Index: -15.8700 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 11.5900
Cell Significance Index: -14.2900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 5.9578
Cell Significance Index: -15.9600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 4.1383
Cell Significance Index: -16.3300 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.1027
Cell Significance Index: 66.2000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 1.0996
Cell Significance Index: 29.4700 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.9414
Cell Significance Index: 72.2400 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.7406
Cell Significance Index: 21.7500 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.6847
Cell Significance Index: 618.2600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.6709
Cell Significance Index: 92.1400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.6315
Cell Significance Index: 73.5900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.6182
Cell Significance Index: 124.0100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.5978
Cell Significance Index: 97.2200 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.5686
Cell Significance Index: 15.2100 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.5599
Cell Significance Index: 12.2600 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.4727
Cell Significance Index: 12.1500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.4541
Cell Significance Index: 12.3600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.4485
Cell Significance Index: 25.1700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.3868
Cell Significance Index: 26.7500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.3810
Cell Significance Index: 6.5300 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.3077
Cell Significance Index: 6.4400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.3012
Cell Significance Index: 19.4400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.2925
Cell Significance Index: 104.9100 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.2738
Cell Significance Index: 46.7500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.2475
Cell Significance Index: 44.6200 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.2394
Cell Significance Index: 130.7600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.2233
Cell Significance Index: 11.6000 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2169
Cell Significance Index: 41.2700 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.2034
Cell Significance Index: 20.1200 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.1944
Cell Significance Index: 5.6000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1936
Cell Significance Index: 23.8000 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.1902
Cell Significance Index: 4.1200 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.1689
Cell Significance Index: 4.7200 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.1653
Cell Significance Index: 2.7900 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1632
Cell Significance Index: 7.6100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.1431
Cell Significance Index: 5.4200 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1428
Cell Significance Index: 63.1200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1352
Cell Significance Index: 5.9800 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1319
Cell Significance Index: 91.2500 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1283
Cell Significance Index: 16.5800 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.1038
Cell Significance Index: 7.3400 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0973
Cell Significance Index: 4.4100 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.0866
Cell Significance Index: 3.0100 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.0840
Cell Significance Index: 2.6900 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0789
Cell Significance Index: 3.7100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.0672
Cell Significance Index: 5.0100 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 0.0616
Cell Significance Index: 0.6700 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0337
Cell Significance Index: 4.3200 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0080
Cell Significance Index: 0.1700 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0043
Cell Significance Index: 3.2300 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0022
Cell Significance Index: -0.0600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0049
Cell Significance Index: -3.6600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0056
Cell Significance Index: -3.5100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0088
Cell Significance Index: -16.5300 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0102
Cell Significance Index: -7.5000 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0107
Cell Significance Index: -19.8100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0128
Cell Significance Index: -19.7400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0146
Cell Significance Index: -19.8100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0149
Cell Significance Index: -0.2500 - Cell Name: peg cell (CL4033014)
Fold Change: -0.0164
Cell Significance Index: -0.3800 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0208
Cell Significance Index: -11.7500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0235
Cell Significance Index: -2.4000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0265
Cell Significance Index: -16.8100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0382
Cell Significance Index: -17.3300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0431
Cell Significance Index: -9.0700 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0447
Cell Significance Index: -12.8600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0576
Cell Significance Index: -6.6000 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.0623
Cell Significance Index: -0.6500 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0750
Cell Significance Index: -3.9400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0928
Cell Significance Index: -18.4200 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0953
Cell Significance Index: -10.8800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1184
Cell Significance Index: -17.2100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.1221
Cell Significance Index: -14.4000 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1454
Cell Significance Index: -8.9400 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1530
Cell Significance Index: -7.9700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.1593
Cell Significance Index: -3.3800 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.1775
Cell Significance Index: -2.6200 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.1884
Cell Significance Index: -4.9600 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1933
Cell Significance Index: -15.3100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.1961
Cell Significance Index: -12.0200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.2109
Cell Significance Index: -13.2900 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.2121
Cell Significance Index: -4.1400 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.2479
Cell Significance Index: -3.5500 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.2507
Cell Significance Index: -3.4200 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.2556
Cell Significance Index: -6.5300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.2804
Cell Significance Index: -8.9300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2828
Cell Significance Index: -7.0700 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.3112
Cell Significance Index: -10.1900 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.3173
Cell Significance Index: -6.3700 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.3226
Cell Significance Index: -11.3000 - Cell Name: proerythroblast (CL0000547)
Fold Change: -0.3266
Cell Significance Index: -4.6800 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.3348
Cell Significance Index: -6.6200 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.3627
Cell Significance Index: -13.3200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 324811028
Symbol: FRDA_HUMAN
Name: Friedreich ataxia protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8596916
Title: Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion.
PubMed ID: 8596916
PubMed ID: 15164053
Title: DNA sequence and analysis of human chromosome 9.
PubMed ID: 15164053
DOI: 10.1038/nature02465
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 18725397
Title: The in vivo mitochondrial two-step maturation of human frataxin.
PubMed ID: 18725397
DOI: 10.1093/hmg/ddn244
PubMed ID: 17468497
PubMed ID: 20053667
Title: Molecular control of the cytosolic aconitase/IRP1 switch by extramitochondrial frataxin.
PubMed ID: 20053667
DOI: 10.1093/hmg/ddp592
PubMed ID: 9302253
Title: Frataxin is reduced in Friedreich ataxia patients and is associated with mitochondrial membranes.
PubMed ID: 9302253
PubMed ID: 9241270
Title: Studies of human, mouse and yeast homologues indicate a mitochondrial function for frataxin.
PubMed ID: 9241270
DOI: 10.1038/ng0897-345
PubMed ID: 10545606
Title: Maturation of frataxin within mammalian and yeast mitochondria: one-step processing by matrix processing peptidase.
PubMed ID: 10545606
PubMed ID: 10428860
Title: Yeast and human frataxin are processed to mature form in two sequential steps by the mitochondrial processing peptidase.
PubMed ID: 10428860
PubMed ID: 11020385
Title: Two-step processing of human frataxin by mitochondrial processing peptidase. Precursor and intermediate forms are cleaved at different rates.
PubMed ID: 11020385
PubMed ID: 11823441
Title: Assembly and iron-binding properties of human frataxin, the protein deficient in Friedreich ataxia.
PubMed ID: 11823441
DOI: 10.1093/hmg/11.3.217
PubMed ID: 12755598
Title: Structure of frataxin iron cores: an X-ray absorption spectroscopic study.
PubMed ID: 12755598
DOI: 10.1021/bi027021l
PubMed ID: 12785837
Title: Iron-sulfur cluster biosynthesis. Characterization of frataxin as an iron donor for assembly of [2Fe-2S] clusters in ISU-type proteins.
PubMed ID: 12785837
DOI: 10.1021/ja027967i
PubMed ID: 15123683
Title: Frataxin-mediated iron delivery to ferrochelatase in the final step of heme biosynthesis.
PubMed ID: 15123683
PubMed ID: 15247478
Title: Frataxin acts as an iron chaperone protein to modulate mitochondrial aconitase activity.
PubMed ID: 15247478
PubMed ID: 15641778
Title: Assembly of human frataxin is a mechanism for detoxifying redox-active iron.
PubMed ID: 15641778
DOI: 10.1021/bi048459j
PubMed ID: 15961414
Title: Frataxin interacts functionally with mitochondrial electron transport chain proteins.
PubMed ID: 15961414
DOI: 10.1093/hmg/ddi214
PubMed ID: 16239244
Title: Frataxin deficiency alters heme pathway transcripts and decreases mitochondrial heme metabolites in mammalian cells.
PubMed ID: 16239244
DOI: 10.1093/hmg/ddi393
PubMed ID: 16091420
Title: Extra-mitochondrial localisation of frataxin and its association with IscU1 during enterocyte-like differentiation of the human colon adenocarcinoma cell line Caco-2.
PubMed ID: 16091420
DOI: 10.1242/jcs.02516
PubMed ID: 15581888
Title: Supramolecular assemblies of human frataxin are formed via subunit-subunit interactions mediated by a non-conserved amino-terminal region.
PubMed ID: 15581888
PubMed ID: 16608849
Title: A pool of extramitochondrial frataxin that promotes cell survival.
PubMed ID: 16608849
PubMed ID: 17331979
Title: Mitochondrial frataxin interacts with ISD11 of the NFS1/ISCU complex and multiple mitochondrial chaperones.
PubMed ID: 17331979
DOI: 10.1093/hmg/ddm038
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21298097
Title: Mammalian frataxin: an essential function for cellular viability through an interaction with a preformed ISCU/NFS1/ISD11 iron-sulfur assembly complex.
PubMed ID: 21298097
PubMed ID: 24971490
Title: Human frataxin activates Fe-S cluster biosynthesis by facilitating sulfur transfer chemistry.
PubMed ID: 24971490
DOI: 10.1021/bi500532e
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 26702583
Title: Mitochondrial Hspa9/Mortalin regulates erythroid differentiation via iron-sulfur cluster assembly.
PubMed ID: 26702583
PubMed ID: 29576242
Title: Interactions of iron-bound frataxin with ISCU and ferredoxin on the cysteine desulfurase complex leading to Fe-S cluster assembly.
PubMed ID: 29576242
PubMed ID: 10900192
PubMed ID: 10903947
Title: Towards a structural understanding of Friedreich's ataxia: the solution structure of frataxin.
PubMed ID: 10903947
PubMed ID: 31101807
Title: Structure of the human frataxin-bound iron-sulfur cluster assembly complex provides insight into its activation mechanism.
PubMed ID: 31101807
PubMed ID: 9150176
Title: Atypical Friedreich ataxia caused by compound heterozygosity for a novel missense mutation and the GAA triplet-repeat expansion.
PubMed ID: 9150176
PubMed ID: 9779809
Title: Identification of a missense mutation in a Friedreich's ataxia patient: implications for diagnosis and carrier studies.
PubMed ID: 9779809
DOI: 10.1002/(sici)1096-8628(19981012)79:5<396::aid-ajmg13>3.3.co;2-b
PubMed ID: 10732799
Title: The correlation of clinical phenotype in Friedreich ataxia with the site of point mutations in the FRDA gene.
PubMed ID: 10732799
PubMed ID: 9989622
Title: Friedreich's ataxia: point mutations and clinical presentation of compound heterozygotes.
PubMed ID: 9989622
DOI: 10.1002/1531-8249(199902)45:2<200::aid-ana10>3.0.co;2-u
PubMed ID: 10874325
Title: A novel missense mutation (L198R) in the Friedreich's ataxia gene.
PubMed ID: 10874325
DOI: 10.1002/1098-1004(200007)16:1<95::aid-humu29>3.0.co;2-e
PubMed ID: 19629184
Title: The first cellular models based on frataxin missense mutations that reproduce spontaneously the defects associated with Friedreich ataxia.
PubMed ID: 19629184
Sequence Information:
- Length: 210
- Mass: 23135
- Checksum: ECC81738779308CF
- Sequence:
MWTLGRRAVA GLLASPSPAQ AQTLTRVPRP AELAPLCGRR GLRTDIDATC TPRRASSNQR GLNQIWNVKK QSVYLMNLRK SGTLGHPGSL DETTYERLAE ETLDSLAEFF EDLADKPYTF EDYDVSFGSG VLTVKLGGDL GTYVINKQTP NKQIWLSSPS SGPKRYDWTG KNWVYSHDGV SLHELLAAEL TKALKTKLDL SSLAYSGKDA
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.