Details for: GRIN2B

Gene ID: 2904

Symbol: GRIN2B

Ensembl ID: ENSG00000273079

Description: glutamate ionotropic receptor NMDA type subunit 2B

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
    Fold Change: 7.12
    Marker Score: 37369
  • Cell Name: stellate neuron (CL0000122)
    Fold Change: 6
    Marker Score: 32228
  • Cell Name: granule cell (CL0000120)
    Fold Change: 5.24
    Marker Score: 39506
  • Cell Name: neuronal brush cell (CL0000555)
    Fold Change: 4.67
    Marker Score: 15646
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: 4.29
    Marker Score: 19861
  • Cell Name: retinal bipolar neuron (CL0000748)
    Fold Change: 3.76
    Marker Score: 31826
  • Cell Name: macroglial cell (CL0000126)
    Fold Change: 3.51
    Marker Score: 8063
  • Cell Name: brainstem motor neuron (CL2000047)
    Fold Change: 3.3
    Marker Score: 1916
  • Cell Name: CNS interneuron (CL0000402)
    Fold Change: 2.96
    Marker Score: 1422
  • Cell Name: cerebral cortex neuron (CL0010012)
    Fold Change: 2.96
    Marker Score: 8434
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 2.9
    Marker Score: 57653
  • Cell Name: pyramidal neuron (CL0000598)
    Fold Change: 2.87
    Marker Score: 4819
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: 2.85
    Marker Score: 21852
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 2.83
    Marker Score: 42298
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 2.71
    Marker Score: 102972
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 2.62
    Marker Score: 10850
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: 2.62
    Marker Score: 1524
  • Cell Name: cerebellar granule cell precursor (CL0002362)
    Fold Change: 2.59
    Marker Score: 1453
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 2.45
    Marker Score: 90367
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 2.36
    Marker Score: 9112
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 2.22
    Marker Score: 855
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 2.19
    Marker Score: 20620
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 2.07
    Marker Score: 127192
  • Cell Name: neuron (CL0000540)
    Fold Change: 2.03
    Marker Score: 8267
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 1.99
    Marker Score: 20566
  • Cell Name: epithelial cell of alveolus of lung (CL0010003)
    Fold Change: 1.99
    Marker Score: 892
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: 1.93
    Marker Score: 18310
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: 1.92
    Marker Score: 3644
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 1.91
    Marker Score: 2317
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: 1.88
    Marker Score: 16148
  • Cell Name: retinal ganglion cell (CL0000740)
    Fold Change: 1.77
    Marker Score: 2213
  • Cell Name: OFF retinal ganglion cell (CL4023033)
    Fold Change: 1.73
    Marker Score: 723
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: 1.66
    Marker Score: 2055
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: 1.66
    Marker Score: 2557
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 1.58
    Marker Score: 6599
  • Cell Name: immature innate lymphoid cell (CL0001082)
    Fold Change: 1.55
    Marker Score: 3155
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.46
    Marker Score: 167864
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 1.35
    Marker Score: 983.5
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 1.26
    Marker Score: 856
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: 1.23
    Marker Score: 737.5
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 1.18
    Marker Score: 2144
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: 1.17
    Marker Score: 487
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 1.15
    Marker Score: 4812
  • Cell Name: ON retinal ganglion cell (CL4023032)
    Fold Change: 1.15
    Marker Score: 313
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 1.1
    Marker Score: 17242
  • Cell Name: renal beta-intercalated cell (CL0002201)
    Fold Change: 1.03
    Marker Score: 325
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71814
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 48039
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.99
    Marker Score: 509
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30407
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.98
    Marker Score: 462
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.95
    Marker Score: 2413
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: 0.95
    Marker Score: 436
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.93
    Marker Score: 374
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.93
    Marker Score: 5301
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 0.92
    Marker Score: 2742
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 0.91
    Marker Score: 2148
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.91
    Marker Score: 326
  • Cell Name: vascular leptomeningeal cell (CL4023051)
    Fold Change: 0.9
    Marker Score: 1034
  • Cell Name: ganglion interneuron (CL0000397)
    Fold Change: 0.88
    Marker Score: 268
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.87
    Marker Score: 5287
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.78
    Marker Score: 1265
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.76
    Marker Score: 396
  • Cell Name: brush cell (CL0002204)
    Fold Change: 0.76
    Marker Score: 695
  • Cell Name: smooth muscle myoblast (CL0000514)
    Fold Change: 0.76
    Marker Score: 361
  • Cell Name: connective tissue cell (CL0002320)
    Fold Change: 0.76
    Marker Score: 196
  • Cell Name: kidney capillary endothelial cell (CL1000892)
    Fold Change: 0.75
    Marker Score: 236
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 0.75
    Marker Score: 16081
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: 0.72
    Marker Score: 432
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.72
    Marker Score: 462
  • Cell Name: glutamatergic neuron (CL0000679)
    Fold Change: 0.7
    Marker Score: 7095
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 0.66
    Marker Score: 325
  • Cell Name: interneuron (CL0000099)
    Fold Change: 0.65
    Marker Score: 296
  • Cell Name: neuronal receptor cell (CL0000006)
    Fold Change: 0.61
    Marker Score: 270
  • Cell Name: intestinal enteroendocrine cell (CL1001516)
    Fold Change: 0.59
    Marker Score: 470
  • Cell Name: ependymal cell (CL0000065)
    Fold Change: 0.55
    Marker Score: 193
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 0.54
    Marker Score: 467
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 0.53
    Marker Score: 2065
  • Cell Name: meningeal macrophage (CL0000879)
    Fold Change: 0.53
    Marker Score: 149
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 0.49
    Marker Score: 16611
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: 0.49
    Marker Score: 2924
  • Cell Name: mature astrocyte (CL0002627)
    Fold Change: 0.46
    Marker Score: 305
  • Cell Name: podocyte (CL0000653)
    Fold Change: 0.45
    Marker Score: 166
  • Cell Name: epicardial adipocyte (CL1000309)
    Fold Change: 0.42
    Marker Score: 202
  • Cell Name: mature microglial cell (CL0002629)
    Fold Change: 0.42
    Marker Score: 150
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 0.4
    Marker Score: 813
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.38
    Marker Score: 224
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 0.37
    Marker Score: 323
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.36
    Marker Score: 489
  • Cell Name: oligodendrocyte (CL0000128)
    Fold Change: 0.36
    Marker Score: 870
  • Cell Name: renal principal cell (CL0005009)
    Fold Change: 0.36
    Marker Score: 279
  • Cell Name: fat cell (CL0000136)
    Fold Change: 0.33
    Marker Score: 187
  • Cell Name: melanocyte (CL0000148)
    Fold Change: 0.32
    Marker Score: 130
  • Cell Name: starburst amacrine cell (CL0004232)
    Fold Change: 0.32
    Marker Score: 90
  • Cell Name: lens fiber cell (CL0011004)
    Fold Change: 0.32
    Marker Score: 100
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 0.31
    Marker Score: 213
  • Cell Name: endothelial cell (CL0000115)
    Fold Change: 0.3
    Marker Score: 273
  • Cell Name: retinal cone cell (CL0000573)
    Fold Change: 0.3
    Marker Score: 868
  • Cell Name: T cell (CL0000084)
    Fold Change: 0.3
    Marker Score: 514.5
  • Cell Name: endothelial cell of lymphatic vessel (CL0002138)
    Fold Change: 0.29
    Marker Score: 181

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Other Information

**Key characteristics:** * NMDA2B is a type of glutamate receptor that is expressed in the central nervous system. * It is a ligand-gated ion channel that is permeable to glutamate ions. * NMDA2B is a subunit of the NMDA receptor complex, which is a heterotetrameric protein complex that is responsible for the NMDA receptor's function. * NMDA2B is a highly conserved protein that is found in mammals, birds, and fish. **Pathways and functions:** * NMDA2B is a key component of the NMDA receptor complex, which is responsible for the NMDA receptor's function. * The NMDA receptor complex is expressed in a variety of brain regions, including the cerebral cortex, hippocampus, and cerebellum. * The NMDA receptor complex is responsible for the NMDA receptor's effects on neuronal excitability, synaptic plasticity, and learning and memory. **Clinical significance:** * Mutations in the GRIN2B gene have been linked to a number of neurodevelopmental disorders, including autism, schizophrenia, and epilepsy. * NMDA receptor agonists are currently being investigated as a treatment for these disorders.

Genular Protein ID: 1955559397

Symbol: NMDE2_HUMAN

Name: Glutamate receptor ionotropic, NMDA 2B

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 7999784

Title: Human N-methyl-D-aspartate receptor modulatory subunit hNR3: cloning and sequencing of the cDNA and primary structure of the protein.

PubMed ID: 7999784

DOI: 10.1016/0167-4781(94)00189-a

PubMed ID: 8768735

Title: Cloning and functional characterization of human heteromeric N-methyl-D-aspartate receptors.

PubMed ID: 8768735

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7959773

Title: Mapping of the human NMDAR2B receptor subunit gene (GRIN2B) to chromosome 12p12.

PubMed ID: 7959773

DOI: 10.1006/geno.1994.1366

PubMed ID: 9547169

Title: mRNA distribution in adult human brain of GRIN2B, a N-methyl-D-aspartate (NMDA) receptor subunit.

PubMed ID: 9547169

DOI: 10.1016/s0304-3940(97)00853-7

PubMed ID: 10748157

Title: Interaction of the tumor suppressor PTEN/MMAC with a PDZ domain of MAGI3, a novel membrane-associated guanylate kinase.

PubMed ID: 10748157

DOI: 10.1074/jbc.m909741199

PubMed ID: 27458189

Title: Synaptonuclear messenger PRR7 inhibits c-Jun ubiquitination and regulates NMDA-mediated excitotoxicity.

PubMed ID: 27458189

DOI: 10.15252/embj.201593070

PubMed ID: 20890276

Title: Mutations in GRIN2A and GRIN2B encoding regulatory subunits of NMDA receptors cause variable neurodevelopmental phenotypes.

PubMed ID: 20890276

DOI: 10.1038/ng.677

PubMed ID: 26919761

Title: Discovery of GluN2A-Selective NMDA Receptor Positive Allosteric Modulators (PAMs): Tuning Deactivation Kinetics via Structure-Based Design.

PubMed ID: 26919761

DOI: 10.1021/acs.jmedchem.5b02010

PubMed ID: 26875626

Title: Positive Allosteric Modulators of GluN2A-Containing NMDARs with Distinct Modes of Action and Impacts on Circuit Function.

PubMed ID: 26875626

DOI: 10.1016/j.neuron.2016.01.016

PubMed ID: 28130356

Title: Mutation Disrupts Dendritic Morphology and Synaptic Transmission, and Causes ASD-Related Behaviors.

PubMed ID: 28130356

DOI: 10.1523/jneurosci.2068-16.2017

PubMed ID: 28126851

Title: Functional evaluation of a de novo GRIN2A mutation identified in a patient with profound global developmental delay and refractory epilepsy.

PubMed ID: 28126851

DOI: 10.1124/mol.116.106781

PubMed ID: 26912815

Title: A Novel Binding Mode Reveals Two Distinct Classes of NMDA Receptor GluN2B-selective Antagonists.

PubMed ID: 26912815

DOI: 10.1124/mol.115.103036

PubMed ID: 22833210

Title: Rare mutations in N-methyl-D-aspartate glutamate receptors in autism spectrum disorders and schizophrenia.

PubMed ID: 22833210

DOI: 10.1038/tp.2011.52

PubMed ID: 23033978

Title: Diagnostic exome sequencing in persons with severe intellectual disability.

PubMed ID: 23033978

DOI: 10.1056/nejmoa1206524

PubMed ID: 23160955

Title: Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.

PubMed ID: 23160955

DOI: 10.1126/science.1227764

PubMed ID: 24272827

Title: GRIN2B mutations in West syndrome and intellectual disability with focal epilepsy.

PubMed ID: 24272827

DOI: 10.1002/ana.24073

PubMed ID: 24863970

Title: Three rare diseases in one sib pair: RAI1, PCK1, GRIN2B mutations associated with Smith-Magenis Syndrome, cytosolic PEPCK deficiency and NMDA receptor glutamate insensitivity.

PubMed ID: 24863970

DOI: 10.1016/j.ymgme.2014.04.001

PubMed ID: 25356899

Title: De novo mutations in moderate or severe intellectual disability.

PubMed ID: 25356899

DOI: 10.1371/journal.pgen.1004772

PubMed ID: 27839871

Title: Mechanistic insight into NMDA receptor dysregulation by rare variants in the GluN2A and GluN2B agonist binding domains.

PubMed ID: 27839871

DOI: 10.1016/j.ajhg.2016.10.002

PubMed ID: 27864847

Title: Diagnostic targeted resequencing in 349 patients with drug-resistant pediatric epilepsies identifies causative mutations in 30 different genes.

PubMed ID: 27864847

DOI: 10.1002/humu.23149

PubMed ID: 28095420

Title: Molecular mechanism of disease-associated mutations in the pre-M1 helix of NMDA receptors and potential rescue pharmacology.

PubMed ID: 28095420

DOI: 10.1371/journal.pgen.1006536

Sequence Information:

  • Length: 1484
  • Mass: 166367
  • Checksum: 40AEB12BE6E50CEF
  • Sequence:
  • MKPRAECCSP KFWLVLAVLA VSGSRARSQK SPPSIGIAVI LVGTSDEVAI KDAHEKDDFH 
    HLSVVPRVEL VAMNETDPKS IITRICDLMS DRKIQGVVFA DDTDQEAIAQ ILDFISAQTL 
    TPILGIHGGS SMIMADKDES SMFFQFGPSI EQQASVMLNI MEEYDWYIFS IVTTYFPGYQ 
    DFVNKIRSTI ENSFVGWELE EVLLLDMSLD DGDSKIQNQL KKLQSPIILL YCTKEEATYI 
    FEVANSVGLT GYGYTWIVPS LVAGDTDTVP AEFPTGLISV SYDEWDYGLP ARVRDGIAII 
    TTAASDMLSE HSFIPEPKSS CYNTHEKRIY QSNMLNRYLI NVTFEGRNLS FSEDGYQMHP 
    KLVIILLNKE RKWERVGKWK DKSLQMKYYV WPRMCPETEE QEDDHLSIVT LEEAPFVIVE 
    SVDPLSGTCM RNTVPCQKRI VTENKTDEEP GYIKKCCKGF CIDILKKISK SVKFTYDLYL 
    VTNGKHGKKI NGTWNGMIGE VVMKRAYMAV GSLTINEERS EVVDFSVPFI ETGISVMVSR 
    SNGTVSPSAF LEPFSADVWV MMFVMLLIVS AVAVFVFEYF SPVGYNRCLA DGREPGGPSF 
    TIGKAIWLLW GLVFNNSVPV QNPKGTTSKI MVSVWAFFAV IFLASYTANL AAFMIQEEYV 
    DQVSGLSDKK FQRPNDFSPP FRFGTVPNGS TERNIRNNYA EMHAYMGKFN QRGVDDALLS 
    LKTGKLDAFI YDAAVLNYMA GRDEGCKLVT IGSGKVFAST GYGIAIQKDS GWKRQVDLAI 
    LQLFGDGEME ELEALWLTGI CHNEKNEVMS SQLDIDNMAG VFYMLGAAMA LSLITFICEH 
    LFYWQFRHCF MGVCSGKPGM VFSISRGIYS CIHGVAIEER QSVMNSPTAT MNNTHSNILR 
    LLRTAKNMAN LSGVNGSPQS ALDFIRRESS VYDISEHRRS FTHSDCKSYN NPPCEENLFS 
    DYISEVERTF GNLQLKDSNV YQDHYHHHHR PHSIGSASSI DGLYDCDNPP FTTQSRSISK 
    KPLDIGLPSS KHSQLSDLYG KFSFKSDRYS GHDDLIRSDV SDISTHTVTY GNIEGNAAKR 
    RKQQYKDSLK KRPASAKSRR EFDEIELAYR RRPPRSPDHK RYFRDKEGLR DFYLDQFRTK 
    ENSPHWEHVD LTDIYKERSD DFKRDSVSGG GPCTNRSHIK HGTGDKHGVV SGVPAPWEKN 
    LTNVEWEDRS GGNFCRSCPS KLHNYSTTVT GQNSGRQACI RCEACKKAGN LYDISEDNSL 
    QELDQPAAPV AVTSNASTTK YPQSPTNSKA QKKNRNKLRR QHSYDTFVDL QKEEAALAPR 
    SVSLKDKGRF MDGSPYAHMF EMSAGESTFA NNKSSVPTAG HHHHNNPGGG YMLSKSLYPD 
    RVTQNPFIPT FGDDQCLLHG SKSYFFRQPT VAGASKARPD FRALVTNKPV VSALHGAVPA 
    RFQKDICIGN QSNPCVPNNK NPRAFNGSSN GHVYEKLSSI ESDV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.