Details for: MMP1

Gene ID: 4312

Symbol: MMP1

Ensembl ID: ENSG00000196611

Description: matrix metallopeptidase 1

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 15.3351
    Cell Significance Index: -6.2300
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: 13.5241
    Cell Significance Index: 81.7100
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 6.5882
    Cell Significance Index: -6.2900
  • Cell Name: oral mucosa squamous cell (CL1001576)
    Fold Change: 2.8154
    Cell Significance Index: 24.1900
  • Cell Name: epithelial cell of lacrimal sac (CL1000436)
    Fold Change: 2.6833
    Cell Significance Index: 19.3100
  • Cell Name: perivascular cell (CL4033054)
    Fold Change: 1.8886
    Cell Significance Index: 8.7200
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: 1.8192
    Cell Significance Index: 13.0700
  • Cell Name: retinal blood vessel endothelial cell (CL0002585)
    Fold Change: 0.9311
    Cell Significance Index: 12.0300
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 0.8934
    Cell Significance Index: 25.6100
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.5327
    Cell Significance Index: 101.3700
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.5165
    Cell Significance Index: 14.8800
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 0.4898
    Cell Significance Index: 3.0800
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.3893
    Cell Significance Index: 23.3700
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.3405
    Cell Significance Index: 17.6900
  • Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
    Fold Change: 0.2192
    Cell Significance Index: 5.3100
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.1929
    Cell Significance Index: 20.9900
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.1574
    Cell Significance Index: 3.4100
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 0.1484
    Cell Significance Index: 17.2900
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: 0.1304
    Cell Significance Index: 1.4800
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 0.1275
    Cell Significance Index: 1.7400
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.1154
    Cell Significance Index: 7.9800
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.1039
    Cell Significance Index: 93.8600
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 0.0888
    Cell Significance Index: 1.5700
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: 0.0716
    Cell Significance Index: 44.7000
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.0711
    Cell Significance Index: 11.5700
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.0501
    Cell Significance Index: 1.7600
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.0487
    Cell Significance Index: 4.8200
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.0339
    Cell Significance Index: 18.4900
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.0169
    Cell Significance Index: 0.3600
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: 0.0169
    Cell Significance Index: 12.8000
  • Cell Name: myometrial cell (CL0002366)
    Fold Change: 0.0161
    Cell Significance Index: 0.1900
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 0.0083
    Cell Significance Index: 0.3900
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.0000
    Cell Significance Index: 0.0000
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0005
    Cell Significance Index: -0.3400
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0020
    Cell Significance Index: -1.1300
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: -0.0024
    Cell Significance Index: -4.5100
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -0.0044
    Cell Significance Index: -0.1100
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.0044
    Cell Significance Index: -8.2000
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.0054
    Cell Significance Index: -0.9300
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.0054
    Cell Significance Index: -8.2700
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: -0.0062
    Cell Significance Index: -2.7200
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.0069
    Cell Significance Index: -9.4200
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: -0.0076
    Cell Significance Index: -1.5100
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.0095
    Cell Significance Index: -1.0900
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.0109
    Cell Significance Index: -2.3000
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.0123
    Cell Significance Index: -7.8300
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.0139
    Cell Significance Index: -4.9900
  • Cell Name: fallopian tube secretory epithelial cell (CL4030006)
    Fold Change: -0.0162
    Cell Significance Index: -0.2500
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0182
    Cell Significance Index: -8.2800
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: -0.0190
    Cell Significance Index: -0.8600
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: -0.0202
    Cell Significance Index: -4.0600
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -0.0205
    Cell Significance Index: -2.3400
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: -0.0224
    Cell Significance Index: -4.0400
  • Cell Name: odontoblast (CL0000060)
    Fold Change: -0.0240
    Cell Significance Index: -3.0800
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.0269
    Cell Significance Index: -1.6500
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.0285
    Cell Significance Index: -1.4400
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.0290
    Cell Significance Index: -8.3300
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: -0.0347
    Cell Significance Index: -0.7200
  • Cell Name: neuron associated cell (CL0000095)
    Fold Change: -0.0360
    Cell Significance Index: -1.4800
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.0434
    Cell Significance Index: -1.3900
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.0515
    Cell Significance Index: -7.4800
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: -0.0527
    Cell Significance Index: -3.7300
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -0.0576
    Cell Significance Index: -1.5400
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: -0.0595
    Cell Significance Index: -1.6600
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: -0.0599
    Cell Significance Index: -8.2200
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.0632
    Cell Significance Index: -3.2900
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.0634
    Cell Significance Index: -6.6000
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.0634
    Cell Significance Index: -8.1900
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.0644
    Cell Significance Index: -4.0600
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -0.0666
    Cell Significance Index: -1.7100
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0806
    Cell Significance Index: -8.2400
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: -0.0843
    Cell Significance Index: -9.9400
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: -0.0916
    Cell Significance Index: -1.5400
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.0924
    Cell Significance Index: -6.2100
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.0977
    Cell Significance Index: -7.2800
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -0.1164
    Cell Significance Index: -8.9300
  • Cell Name: Hofbauer cell (CL3000001)
    Fold Change: -0.1165
    Cell Significance Index: -0.9500
  • Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
    Fold Change: -0.1221
    Cell Significance Index: -1.3400
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -0.1341
    Cell Significance Index: -3.6500
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: -0.1400
    Cell Significance Index: -6.0900
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.1483
    Cell Significance Index: -9.5700
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.1533
    Cell Significance Index: -9.4200
  • Cell Name: BEST4+ enteroycte (CL4030026)
    Fold Change: -0.1559
    Cell Significance Index: -2.3500
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.1570
    Cell Significance Index: -5.1400
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -0.1616
    Cell Significance Index: -5.6600
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.1670
    Cell Significance Index: -5.3200
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -0.1697
    Cell Significance Index: -6.2300
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.1784
    Cell Significance Index: -10.0100
  • Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
    Fold Change: -0.1833
    Cell Significance Index: -4.5700
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: -0.1919
    Cell Significance Index: -3.2800
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.1956
    Cell Significance Index: -9.1200
  • Cell Name: T-helper 17 cell (CL0000899)
    Fold Change: -0.1983
    Cell Significance Index: -1.5100
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: -0.2002
    Cell Significance Index: -1.3100
  • Cell Name: skeletal muscle fibroblast (CL0011027)
    Fold Change: -0.2048
    Cell Significance Index: -1.3900
  • Cell Name: epithelial cell of pancreas (CL0000083)
    Fold Change: -0.2051
    Cell Significance Index: -3.3800
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: -0.2062
    Cell Significance Index: -2.1400
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.2062
    Cell Significance Index: -9.1200
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -0.2090
    Cell Significance Index: -5.6000
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -0.2099
    Cell Significance Index: -5.2400
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.2105
    Cell Significance Index: -5.6300

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** MMP1 is a secreted enzyme that belongs to the zinc-dependent metalloproteinase family. It is also known as collagenase-1, due to its ability to degrade type I collagen. MMP1 is a trypsin-like enzyme, with a molecular weight of approximately 55 kDa. It is produced by various cell types, including stromal cells in the lamina propria of the small intestine, mucous neck cells, colon goblet cells, and granulocyte-monocyte progenitor cells. **Pathways and Functions:** MMP1 plays a critical role in the degradation and remodeling of the ECM, which is essential for tissue repair, growth, and development. The enzyme is involved in various physiological processes, including: 1. **Extracellular Matrix Degradation:** MMP1 breaks down collagen, elastin, and other ECM components, allowing for tissue remodeling and repair. 2. **Cell Migration and Invasion:** MMP1 facilitates cell migration and invasion by degrading the ECM, enabling cells to move through tissues. 3. **Inflammation and Immune Response:** MMP1 is involved in the regulation of inflammatory responses, including the degradation of collagen and other ECM components, which can influence the severity of inflammation. 4. **Cancer Metastasis:** MMP1 has been implicated in the progression of various cancers, including the degradation of the ECM and the promotion of cell migration and invasion. MMP1 also plays a role in other pathways, including: 1. **Basigin Interactions:** MMP1 interacts with basigin (CD147), a transmembrane glycoprotein that regulates the expression of MMPs. 2. **Cytokine Signaling:** MMP1 is involved in the regulation of cytokine signaling, including the degradation of extracellular matrix components and the promotion of cell migration. 3. **Hemostasis:** MMP1 plays a role in the regulation of hemostasis, including the degradation of collagen and other ECM components, which can influence blood clot formation. **Clinical Significance:** MMP1 has significant clinical implications in various diseases, including: 1. **Cancer:** MMP1 has been implicated in the progression of various cancers, including breast, lung, and colon cancer. 2. **Atherosclerosis:** MMP1 plays a role in the degradation of the ECM, which can influence the development of atherosclerosis. 3. **Inflammatory Diseases:** MMP1 is involved in the regulation of inflammatory responses, including the degradation of collagen and other ECM components, which can influence the severity of inflammatory diseases, such as rheumatoid arthritis. 4. **Wound Healing:** MMP1 plays a role in the degradation of the ECM, which can influence the severity of wound healing. In conclusion, MMP1 is a crucial enzyme in the regulation of the extracellular matrix and immune response. Its dysregulation has significant clinical implications in various diseases, including cancer, atherosclerosis, inflammatory diseases, and wound healing. Further research is needed to fully understand the role of MMP1 in these diseases and to develop therapeutic strategies that target this enzyme.

Genular Protein ID: 2815379592

Symbol: MMP1_HUMAN

Name: Interstitial collagenase

UniProtKB Accession Codes:

P03956 P08156

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 BMRB 1 BRENDA 1 Bgee 1 BindingDB 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 1 CDD 2 CTD 1 ChEBI 26 ChEMBL 1 ChiTaRS 1 DIP 1 DMDM 1 DNASU 1 DisGeNET 1 DrugBank 6 DrugCentral 1 EC 1 EMBL 9 Ensembl 1 EvolutionaryTrace 1 GO 14 Gene3D 2 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 GlyConnect 1 GlyCosmos 1 GlyGen 1 GuidetoPHARMACOLOGY 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 12 KEGG 1 MANE-Select 1 MEROPS 1 MIM 1 MINT 1 MalaCards 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 Orphanet 1 OrthoDB 1 PANTHER 2 PDB 15 PDBsum 15 PIR 1 PIRSF 1 PRINTS 1 PRO 1 PROSITE 4 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 3 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 RNAct 1 Reactome 6 RefSeq 1 SASBDB 1 SIGNOR 1 SMART 2 SMR 1 STRING 1 SUPFAM 3 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 2167156

Title: Cloning and characterization of human tumor cell interstitial collagenase.

PubMed ID: 2167156

PubMed ID: 3030290

Title: Comparison of human stromelysin and collagenase by cloning and sequence analysis.

PubMed ID: 3030290

DOI: 10.1042/bj2400913

PubMed ID: 3009463

Title: Human fibroblast collagenase. Complete primary structure and homology to an oncogene transformation-induced rat protein.

PubMed ID: 3009463

DOI: 10.1016/s0021-9258(19)84605-7

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 3037355

Title: 12-O-tetradecanoyl-phorbol-13-acetate induction of the human collagenase gene is mediated by an inducible enhancer element located in the 5'-flanking region.

PubMed ID: 3037355

DOI: 10.1128/mcb.7.6.2256-2266.1987

PubMed ID: 3027129

Title: Molecular cloning of human synovial cell collagenase and selection of a single gene from genomic DNA.

PubMed ID: 3027129

DOI: 10.1172/jci112845

PubMed ID: 2557822

Title: Fragments of human fibroblast collagenase. Purification and characterization.

PubMed ID: 2557822

DOI: 10.1042/bj2630201

PubMed ID: 3032950

Title: Human fibroblast collagenase contains an amino acid sequence homologous to the zinc-binding site of Serratia protease.

PubMed ID: 3032950

DOI: 10.1016/s0021-9258(18)45517-2

PubMed ID: 2153297

Title: Multiple modes of activation of latent human fibroblast collagenase: evidence for the role of a Cys73 active-site zinc complex in latency and a 'cysteine switch' mechanism for activation.

PubMed ID: 2153297

DOI: 10.1073/pnas.87.1.364

PubMed ID: 1645757

Title: Interstitial collagenase (matrix metalloproteinase-1) expresses serpinase activity.

PubMed ID: 1645757

DOI: 10.1172/jci115262

PubMed ID: 10092871

Title: N-glycan structures of matrix metalloproteinase-1 derived from human fibroblasts and from HT-1080 fibrosarcoma cells.

PubMed ID: 10092871

DOI: 10.1046/j.1432-1327.1999.00105.x

PubMed ID: 16807369

Title: Interaction of HIV Tat and matrix metalloproteinase in HIV neuropathogenesis: a new host defense mechanism.

PubMed ID: 16807369

DOI: 10.1096/fj.05-5619fje

PubMed ID: 25171405

Title: A secreted tyrosine kinase acts in the extracellular environment.

PubMed ID: 25171405

DOI: 10.1016/j.cell.2014.06.048

PubMed ID: 7656013

Title: Structure of the catalytic domain of human fibroblast collagenase complexed with an inhibitor.

PubMed ID: 7656013

DOI: 10.1038/nsb0294-106

PubMed ID: 8031754

Title: Crystal structures of recombinant 19-kDa human fibroblast collagenase complexed to itself.

PubMed ID: 8031754

DOI: 10.1021/bi00193a006

PubMed ID: 8278810

Title: Structure of the catalytic domain of fibroblast collagenase complexed with an inhibitor.

PubMed ID: 8278810

DOI: 10.1126/science.8278810

PubMed ID: 8090713

Title: 1.56-A structure of mature truncated human fibroblast collagenase.

PubMed ID: 8090713

DOI: 10.1002/prot.340190203

PubMed ID: 9484219

Title: High-resolution solution structure of the inhibitor-free catalytic fragment of human fibroblast collagenase determined by multidimensional NMR.

PubMed ID: 9484219

DOI: 10.1021/bi972181w

PubMed ID: 15611040

Title: X-ray structure of human proMMP-1: new insights into procollagenase activation and collagen binding.

PubMed ID: 15611040

DOI: 10.1074/jbc.m411084200

Sequence Information:

  • Length: 469
  • Mass: 54007
  • Checksum: 4B1361DCF4C54B20
  • Sequence:
    • MHSFPPLLLL LFWGVVSHSF PATLETQEQD VDLVQKYLEK YYNLKNDGRQ VEKRRNSGPV 
VEKLKQMQEF FGLKVTGKPD AETLKVMKQP RCGVPDVAQF VLTEGNPRWE QTHLTYRIEN 
YTPDLPRADV DHAIEKAFQL WSNVTPLTFT KVSEGQADIM ISFVRGDHRD NSPFDGPGGN 
LAHAFQPGPG IGGDAHFDED ERWTNNFREY NLHRVAAHEL GHSLGLSHST DIGALMYPSY 
TFSGDVQLAQ DDIDGIQAIY GRSQNPVQPI GPQTPKACDS KLTFDAITTI RGEVMFFKDR 
FYMRTNPFYP EVELNFISVF WPQLPNGLEA AYEFADRDEV RFFKGNKYWA VQGQNVLHGY 
PKDIYSSFGF PRTVKHIDAA LSEENTGKTY FFVANKYWRY DEYKRSMDPG YPKMIAHDFP 
GIGHKVDAVF MKDGFFYFFH GTRQYKFDPK TKRILTLQKA NSWFNCRKN

Genular Protein ID: 3368674120

Symbol: B4DN15_HUMAN

Name: N/A

UniProtKB Accession Codes:

B4DN15

Database IDs:

ARBA 12 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChEBI 26 DNASU 1 DisGeNET 1 EC 1 EMBL 2 GO 5 Gene3D 2 InterPro 11 MEROPS 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PIRSR 6 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 2 PharmGKB 1 RefSeq 1 SMART 3 SMR 1 SUPFAM 3

Sequence Information:

  • Length: 403
  • Mass: 46266
  • Checksum: 1004B620F5E64475
  • Sequence:
    • MQEFFGLKVT GKPDAETLKV MKQPRCGVPD VAQFVLTEGN PRWEQTHLTY RIENYTPDLP 
RADVDHAIEK AFQLWSNVTP LTFTKVSEGQ ADIMISFVRG DHRDNSPFDG PGGNLAHAFQ 
PGPGIGGDAH FDEDERWTNN FREYNLHRVA AHELGHSLGL SHSTDIGALM YPSYTFSGDV 
QLAQDDIDGI QAIYGRSQNP VQPIGPQTPK ACDSKLTFDA ITTIRGEVMF FKDRFYMRTN 
PFYPEVELNF ISVFWPQLPN GLEAAYEFAD RDEVRFFKGN KYWAVQGQNV LHGYPKDIYS 
SFGFPRTVKH IDAALSEENT GKTYFFVANK YWRYDEYKRS MDPGYPKMIA HDFPGIGHKV 
DAVFMKDGFF YFFHGTRQYK FDPKTKRILT LQKANSWFNC RKN

Genular Protein ID: 1211197089

Symbol: Q53G95_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q53G95

Database IDs:

ARBA 12 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChEBI 24 DNASU 1 DisGeNET 1 EC 1 EMBL 2 GO 4 Gene3D 2 InterPro 9 KEGG 1 MEROPS 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PIRSR 5 PRINTS 1 PROSITE 2 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 2 PharmGKB 1 RefSeq 1 SMART 3 SUPFAM 2

Citations:

PubMed ID: 8125298

Title: Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.

PubMed ID: 8125298

DOI: 10.1016/0378-1119(94)90802-8

PubMed ID: 9373149

Title: Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.

PubMed ID: 9373149

DOI: 10.1016/S0378-1119(97)00411-3

Sequence Information:

  • Length: 338
  • Mass: 38745
  • Checksum: 00757969533BD994
  • Sequence:
    • HAIEKAFQLW SNVTPLTFTK VSEGQADIMI SFVRGDHRDN SPFDGPGGNL AHAFQPGPGI 
GGDAHFDEDE RWTNNFREYN LHRVAAHELG HSLGLSHSTD IGALMYPSYT FSGDVQLAQD 
DIDGIQAIYG RSQNPVQPIG PQTPKACDSK LTFDAITTIR GEVMFFKDRF YMRTNPFYPE 
VELNFISVFW PQLPNGLEAA YESADRDEVR FFKGNKYWAV QGQNVLHGYP KDIYSSFGFP 
RTVKHIDAAL SEENTGKTYF FVANKYWRYD EYKRSMDPGY PKMIAHDFPG IGHKVDAVFM 
KDGFFYFFHG TRQYKFDPKT KRILTLQKAN SWFNCRKN

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.