Details for: RARB

Gene ID: 5915

Symbol: RARB

Ensembl ID: ENSG00000077092

Description: retinoic acid receptor beta

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 188.4339
    Cell Significance Index: -29.3100
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 115.7136
    Cell Significance Index: -29.3500
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 57.6236
    Cell Significance Index: -23.4100
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 24.4883
    Cell Significance Index: -23.3800
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 23.7721
    Cell Significance Index: -29.3100
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 7.4378
    Cell Significance Index: -29.3500
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: 5.2320
    Cell Significance Index: 231.4300
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: 5.0629
    Cell Significance Index: 191.7200
  • Cell Name: kidney capillary endothelial cell (CL1000892)
    Fold Change: 3.4791
    Cell Significance Index: 36.0400
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.6980
    Cell Significance Index: 36.8100
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 2.0893
    Cell Significance Index: 117.2400
  • Cell Name: basal epithelial cell of prostatic duct (CL0002236)
    Fold Change: 1.9382
    Cell Significance Index: 17.2100
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 1.8339
    Cell Significance Index: 140.7300
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 1.6057
    Cell Significance Index: 728.7700
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.4727
    Cell Significance Index: 295.4300
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.0684
    Cell Significance Index: 738.9400
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.5181
    Cell Significance Index: 329.0500
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 0.4269
    Cell Significance Index: 9.1300
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.4049
    Cell Significance Index: 77.0600
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.2493
    Cell Significance Index: 225.1300
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.2150
    Cell Significance Index: 292.3700
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.2092
    Cell Significance Index: 393.8100
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.1995
    Cell Significance Index: 7.0100
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.1959
    Cell Significance Index: 19.3800
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.1880
    Cell Significance Index: 289.4100
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.1567
    Cell Significance Index: 4.3800
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: 0.1490
    Cell Significance Index: 2.2000
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.1343
    Cell Significance Index: 48.1700
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.1031
    Cell Significance Index: 190.0700
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.0754
    Cell Significance Index: 9.6700
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.0742
    Cell Significance Index: 12.0800
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.0394
    Cell Significance Index: 7.1000
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: 0.0256
    Cell Significance Index: 1.7200
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.0199
    Cell Significance Index: 0.9300
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: 0.0164
    Cell Significance Index: 1.7100
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 0.0088
    Cell Significance Index: 1.0200
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: 0.0012
    Cell Significance Index: 0.1800
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.0002
    Cell Significance Index: 0.0100
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.0076
    Cell Significance Index: -0.4700
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.0098
    Cell Significance Index: -0.6000
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: -0.0132
    Cell Significance Index: -0.3800
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: -0.0139
    Cell Significance Index: -1.7100
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: -0.0245
    Cell Significance Index: -4.8600
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0301
    Cell Significance Index: -22.0700
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -0.0340
    Cell Significance Index: -0.9300
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: -0.0373
    Cell Significance Index: -20.3700
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0398
    Cell Significance Index: -29.4600
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0406
    Cell Significance Index: -30.7000
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: -0.0462
    Cell Significance Index: -20.4200
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0496
    Cell Significance Index: -31.0000
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -0.0504
    Cell Significance Index: -1.2600
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0545
    Cell Significance Index: -30.7400
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: -0.0583
    Cell Significance Index: -6.3500
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.0799
    Cell Significance Index: -22.9800
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: -0.1013
    Cell Significance Index: -4.5900
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.1018
    Cell Significance Index: -2.1600
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.1451
    Cell Significance Index: -30.5600
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: -0.1470
    Cell Significance Index: -20.1900
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -0.1534
    Cell Significance Index: -3.0800
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -0.1592
    Cell Significance Index: -3.4500
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.1608
    Cell Significance Index: -27.4600
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.1834
    Cell Significance Index: -18.7300
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: -0.2060
    Cell Significance Index: -14.2500
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.2066
    Cell Significance Index: -26.6900
  • Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
    Fold Change: -0.2123
    Cell Significance Index: -3.0400
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.2321
    Cell Significance Index: -26.5900
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.2336
    Cell Significance Index: -4.8900
  • Cell Name: epithelial cell of prostate (CL0002231)
    Fold Change: -0.2342
    Cell Significance Index: -1.4500
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: -0.2414
    Cell Significance Index: -28.4700
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.2835
    Cell Significance Index: -14.7700
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.2915
    Cell Significance Index: -6.9900
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.2970
    Cell Significance Index: -5.0900
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: -0.3012
    Cell Significance Index: -18.0800
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: -0.3043
    Cell Significance Index: -4.6300
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.3282
    Cell Significance Index: -25.9900
  • Cell Name: serous secreting cell of bronchus submucosal gland (CL4033005)
    Fold Change: -0.3328
    Cell Significance Index: -3.3300
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: -0.3371
    Cell Significance Index: -17.5100
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.3383
    Cell Significance Index: -17.7600
  • Cell Name: Mueller cell (CL0000636)
    Fold Change: -0.3444
    Cell Significance Index: -2.6500
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.3570
    Cell Significance Index: -26.6100
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.4132
    Cell Significance Index: -26.6600
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -0.4221
    Cell Significance Index: -2.5500
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -0.4326
    Cell Significance Index: -11.1200
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.4357
    Cell Significance Index: -13.9600
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.4393
    Cell Significance Index: -20.6500
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -0.4418
    Cell Significance Index: -11.0200
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: -0.4749
    Cell Significance Index: -6.8300
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: -0.4753
    Cell Significance Index: -9.8600
  • Cell Name: keratocyte (CL0002363)
    Fold Change: -0.4847
    Cell Significance Index: -7.6900
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: -0.4906
    Cell Significance Index: -7.0500
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -0.4944
    Cell Significance Index: -17.1800
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -0.4950
    Cell Significance Index: -8.2900
  • Cell Name: regular ventricular cardiac myocyte (CL0002131)
    Fold Change: -0.4991
    Cell Significance Index: -6.4000
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: -0.5180
    Cell Significance Index: -22.5200
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: -0.5568
    Cell Significance Index: -12.0300
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.5593
    Cell Significance Index: -18.3100
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -0.5695
    Cell Significance Index: -19.9500
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: -0.5941
    Cell Significance Index: -12.4000
  • Cell Name: lens fiber cell (CL0011004)
    Fold Change: -0.6267
    Cell Significance Index: -19.8200
  • Cell Name: basal cell of epidermis (CL0002187)
    Fold Change: -0.6281
    Cell Significance Index: -9.5400

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** 1. **Retinoic acid receptor**: RARB is a nuclear receptor that binds to retinoic acid, a hormone-like substance derived from vitamin A. 2. **Dual function**: RARB can act as both a transcriptional activator and repressor, depending on the context and ligand. 3. **Developmental significance**: RARB plays a crucial role in embryonic development, particularly in the formation of the anterior hindbrain, hindlimb, and eye morphogenesis. 4. **Cell differentiation**: RARB regulates the differentiation of various cell types, including cardiac myocytes, kidney fibroblasts, and neuronal cells. 5. **Signaling pathways**: RARB is involved in multiple signaling pathways, including the retinoic acid signaling pathway, the Wnt/β-catenin pathway, and the Hedgehog pathway. **Pathways and Functions** 1. **Retinoic acid signaling pathway**: RARB regulates the expression of target genes in response to retinoic acid, leading to cell differentiation, proliferation, and survival. 2. **Hox gene regulation**: RARB activates the expression of Hox genes, which are essential for the development of the anterior hindbrain and hindlimb. 3. **Apoptotic process**: RARB can regulate the apoptotic process, influencing cell survival and death. 4. **Cell differentiation**: RARB regulates the differentiation of various cell types, including cardiac myocytes, kidney fibroblasts, and neuronal cells. 5. **Gene expression**: RARB regulates the expression of target genes, influencing gene transcription and translation. **Clinical Significance** 1. **Cancer**: Dysregulation of RARB has been implicated in various cancers, including leukemia, lymphoma, and breast cancer. 2. **Cardiovascular disorders**: RARB is involved in the regulation of cardiac development and function, and its dysregulation has been linked to cardiovascular disorders, such as aortic aneurysms and cardiac arrhythmias. 3. **Developmental abnormalities**: RARB plays a crucial role in embryonic development, and its dysregulation can lead to developmental abnormalities, including neural tube defects and cleft palate. 4. **Neurological disorders**: RARB is involved in the regulation of neuronal development and function, and its dysregulation has been linked to neurological disorders, such as autism and schizophrenia. In conclusion, the RARB gene plays a crucial role in various cellular processes, including cell differentiation, development, and signaling pathways. Its dysregulation has been implicated in various diseases, including cancer, cardiovascular disorders, and developmental abnormalities. Further research is needed to fully understand the mechanisms of RARB and its clinical significance.

Genular Protein ID: 131775931

Symbol: RARB_HUMAN

Name: Retinoic acid receptor beta

UniProtKB Accession Codes:

P10826 P12891 Q00989 Q15298 Q9UN48

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BindingDB 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 3 CDD 2 CTD 1 ChEMBL 1 ChiTaRS 1 DMDM 1 DNASU 1 DisGeNET 1 DrugBank 10 DrugCentral 1 EMBL 8 Ensembl 9 EvolutionaryTrace 1 ExpressionAtlas 1 GO 36 Gene3D 2 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 GlyCosmos 1 GlyGen 1 GuidetoPHARMACOLOGY 1 HGNC 1 HOGENOM 1 HPA 1 IDEAL 1 InParanoid 1 IntAct 1 InterPro 8 KEGG 1 MANE-Select 1 MIM 3 MINT 1 MalaCards 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 Orphanet 1 OrthoDB 1 PANTHER 2 PDB 9 PDBsum 9 PIR 2 PRINTS 3 PRO 1 PROSITE 3 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 2 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 3 RNAct 1 Reactome 3 RefSeq 6 SIGNOR 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 2836738

Title: A new retinoic acid receptor identified from a hepatocellular carcinoma.

PubMed ID: 2836738

DOI: 10.1038/333669a0

PubMed ID: 2825037

Title: A novel steroid thyroid hormone receptor-related gene inappropriately expressed in human hepatocellular carcinoma.

PubMed ID: 2825037

DOI: 10.1038/330667a0

PubMed ID: 10411930

Title: Elevated retinoic acid receptor beta(4) protein in human breast tumor cells with nuclear and cytoplasmic localization.

PubMed ID: 10411930

DOI: 10.1073/pnas.96.15.8651

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 1663808

Title: Mouse and human retinoic acid receptor beta 2 promoters: sequence comparison and localization of retinoic acid responsiveness.

PubMed ID: 1663808

DOI: 10.3109/10425179109039679

PubMed ID: 8275470

Title: Fetal isoform of human retinoic acid receptor beta expressed in small cell lung cancer lines.

PubMed ID: 8275470

PubMed ID: 3014347

Title: Hepatitis B virus DNA integration in a sequence homologous to v-erb-A and steroid receptor genes in a hepatocellular carcinoma.

PubMed ID: 3014347

DOI: 10.1038/322070a0

PubMed ID: 2170809

Title: Hepatitis B virus as an insertional mutagene in a human hepatocellular carcinoma.

PubMed ID: 2170809

PubMed ID: 2833708

Title: Identification of a second human retinoic acid receptor.

PubMed ID: 2833708

DOI: 10.1038/332850a0

PubMed ID: 12554770

Title: Retinoic acid receptors beta and gamma do not repress, but instead activate target gene transcription in both the absence and presence of hormone ligand.

PubMed ID: 12554770

DOI: 10.1210/me.2002-0340

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 28167758

Title: MicroRNA-10a is crucial for endothelial response to different flow patterns via interaction of retinoid acid receptors and histone deacetylases.

PubMed ID: 28167758

DOI: 10.1073/pnas.1621425114

PubMed ID: 1321662

Title: Homo- and heteronuclear NMR studies of the human retinoic acid receptor beta DNA-binding domain: sequential assignments and identification of secondary structure elements.

PubMed ID: 1321662

DOI: 10.1021/bi00143a017

PubMed ID: 8383553

Title: The solution structure of the human retinoic acid receptor-beta DNA-binding domain.

PubMed ID: 8383553

DOI: 10.1007/bf00242472

PubMed ID: 29021580

Title: The quaternary architecture of RARbeta-RXRalpha heterodimer facilitates domain-domain signal transmission.

PubMed ID: 29021580

DOI: 10.1038/s41467-017-00981-y

PubMed ID: 16959974

Title: The consensus coding sequences of human breast and colorectal cancers.

PubMed ID: 16959974

DOI: 10.1126/science.1133427

PubMed ID: 24075189

Title: Recessive and dominant mutations in retinoic acid receptor beta in cases with microphthalmia and diaphragmatic hernia.

PubMed ID: 24075189

DOI: 10.1016/j.ajhg.2013.08.014

PubMed ID: 27120018

Title: Gain-of-function mutations in RARB cause intellectual disability with progressive motor impairment.

PubMed ID: 27120018

DOI: 10.1002/humu.23004

Sequence Information:

  • Length: 455
  • Mass: 50489
  • Checksum: 8813263AD0495D5A
  • Sequence:
    • MTTSGHACPV PAVNGHMTHY PATPYPLLFP PVIGGLSLPP LHGLHGHPPP SGCSTPSPAT 
IETQSTSSEE LVPSPPSPLP PPRVYKPCFV CQDKSSGYHY GVSACEGCKG FFRRSIQKNM 
IYTCHRDKNC VINKVTRNRC QYCRLQKCFE VGMSKESVRN DRNKKKKETS KQECTESYEM 
TAELDDLTEK IRKAHQETFP SLCQLGKYTT NSSADHRVRL DLGLWDKFSE LATKCIIKIV 
EFAKRLPGFT GLTIADQITL LKAACLDILI LRICTRYTPE QDTMTFSDGL TLNRTQMHNA 
GFGPLTDLVF TFANQLLPLE MDDTETGLLS AICLICGDRQ DLEEPTKVDK LQEPLLEALK 
IYIRKRRPSK PHMFPKILMK ITDLRSISAK GAERVITLKM EIPGSMPPLI QEMLENSEGH 
EPLTPSSSGN TAEHSPSISP SSVENSGVSQ SPLVQ

Genular Protein ID: 277760918

Symbol: Q5QHG3_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q5QHG3

Database IDs:

ARBA 10 AlphaFoldDB 1 Antibodypedia 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 6 ExpressionAtlas 1 GO 8 Gene3D 2 HOGENOM 1 InterPro 7 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 4 Pfam 2 PharmGKB 1 RefSeq 3 SAM 1 SMART 2 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 15604252

Title: A novel RARbeta isoform directed by a distinct promoter P3 and mediated by retinoic acid in breast cancer cells.

PubMed ID: 15604252

DOI: 10.1158/0008-5472.CAN-04-1810

Sequence Information:

  • Length: 336
  • Mass: 37932
  • Checksum: D248E5CAB87DA44E
  • Sequence:
    • MIYTCHRDKN CVINKVTRNR CQYCRLQKCF EVGMSKESVR NDRNKKKKET SKQECTESYE 
MTAELDDLTE KIRKAHQETF PSLCQLGKYT TNSSADHRVR LDLGLWDKFS ELATKCIIKI 
VEFAKRLPGF TGLTIADQIT LLKAACLDIL ILRICTRYTP EQDTMTFSDG LTLNRTQMHN 
AGFGPLTDLV FTFANQLLPL EMDDTETGLL SAICLICGDR QDLEEPTKVD KLQEPLLEAL 
KIYIRKRRPS KPHMFPKILM KITDLRSISA KGAERVITLK MEIPGSMPPL IQEMLENSEG 
HEPLTPSSSG NTAEHSPSIS PSSVENSGVS QSPLVQ

Genular Protein ID: 1274642250

Symbol: A0A8I5KWP3_HUMAN

Name: N/A

UniProtKB Accession Codes:

A0A8I5KWP3

Database IDs:

ARBA 11 CDD 1 CTD 1 DisGeNET 1 EMBL 8 Ensembl 2 GO 5 Gene3D 2 GeneTree 1 HGNC 1 InterPro 7 NCBI Taxonomy 1 PANTHER 2 PRINTS 3 PROSITE 5 PeptideAtlas 2 Pfam 2 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 2 SMR 1 SUPFAM 2

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16641997

Title: The DNA sequence, annotation and analysis of human chromosome 3.

PubMed ID: 16641997

DOI: 10.1038/nature04728

Sequence Information:

  • Length: 402
  • Mass: 45125
  • Checksum: 5A47741E5118A926
  • Sequence:
    • MFDCMDVLSV SPGQILDFYT ASPSSCMLQE KALKACFSGL TQTEWQHRHT AQSIETQSTS 
SEELVPSPPS PLPPPRVYKP CFVCQDKSSG YHYGVSACEG CKGFFRRSIQ KNMIYTCHRD 
KNCVINKVTR NRCQYCRLQK CFEVGMSKES VRNDRNKKKK ETSKQECTES YEMTAELDDL 
TEKIRKAHQE TFPSLCQLGK YTTNSSADHR VRLDLGLWDK FSELATKCII KIVEFAKRLP 
GFTGLTIADQ ITLLKAACLD ILLLPLEMDD TETGLLSAIC LICGDRQDLE EPTKVDKLQE 
PLLEALKIYI RKRRPSKPHM FPKILMKITD LRSISAKGAE RVITLKMEIP GSMPPLIQEM 
LENSEGHEPL TPSSSGNTAE HSPSISPSSV ENSGVSQSPL VQ

Genular Protein ID: 3020717367

Symbol: Q3SB16_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q3SB16

Database IDs:

ARBA 11 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 DisGeNET 1 EMBL 2 GO 5 Gene3D 2 InterPro 6 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 5 PeptideAtlas 1 Pfam 1 RefSeq 1 SMART 1 SMR 1 SUPFAM 2

Citations:

PubMed ID: 16288117

Title: A novel retinoic acid receptor beta isoform and retinoid resistance in lung carcinogenesis.

PubMed ID: 16288117

DOI: 10.1093/jnci/dji371

Sequence Information:

  • Length: 184
  • Mass: 21193
  • Checksum: CEDCC8908AC3B624
  • Sequence:
    • MKLSRIAFPA VETQSTSSEE LVPSPPSPLP PPRVYKPCFV CQDKSSGYHY GVSACEGCKG 
FFRRSIQKNM IYTCHRDKNC VINKVTRNRC QYCRLQKCFE VGMSKESVRN DRNKKKKETS 
KQECTESYEM TAELDDLTEK IRKAHQETFP SLCQLGKYTT NSNADHRVRL DLGLWDKFSE 
LATK

Genular Protein ID: 3341432402

Symbol: F1D8S6_HUMAN

Name: N/A

UniProtKB Accession Codes:

F1D8S6

Database IDs:

ARBA 11 AlphaFoldDB 1 Antibodypedia 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 4 ExpressionAtlas 1 GO 29 Gene3D 2 InterPro 8 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 3 PROSITE 5 Pfam 2 RefSeq 2 RuleBase 1 SAM 1 SMART 2 SMR 1 SUPFAM 2 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

Sequence Information:

  • Length: 448
  • Mass: 50344
  • Checksum: 844A298AD32F46A8
  • Sequence:
    • MFDCMDVLSV SPGQILDFYT ASPSSCMLQE KALKACFSGL TQTEWQHRHT AQSIETQSTS 
SEELVPSPPS PLPPPRVYKP CFVCQDKSSG YHYGVSACEG CKGFFRRSIQ KNMIYTCHRD 
KNCVINKVTR NRCQYCRLQK CFEVGMSKES VRNDRNKKKK ETSKQECTES YEMTAELDDL 
TEKIRKAHQE TFPSLCQLGK YTTNSSADHR VRLDLGLWDK FSELATKCII KIVEFAKRLP 
GFTGLTIADQ ITLLKAACLD ILILRICTRY TPEQDTMTFS DGLTLNRTQM HNAGFGPLTD 
LVFTFANQLL PLEMDDTETG LLSAICLICG DRQDLEEPTK VDKLQEPLLE ALKIYIRKRR 
PSKPHMFPKI LMKITDLRSI SAKGAERVIT LKMEIPGSMP PLIQEMLENS EGHEPLTPSS 
SGNTAEHSPS ISPSSVENSG VSQSPLVQ

Genular Protein ID: 1178581975

Symbol: Q86UC5_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q86UC5

Database IDs:

ARBA 10 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 2 GO 8 Gene3D 2 IntAct 1 InterPro 7 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 4 PeptideAtlas 1 Pfam 2 RefSeq 2 SAM 1 SMART 2 SUPFAM 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 346
  • Mass: 39196
  • Checksum: 70C1ED2DFF2E6E17
  • Sequence:
    • GFFRRSIQKN MIYTCHRDKN CVINKVTRNR CQYCRLQKCF EVGMSKESVR NDRNKKKKET 
SKQECTESYE MTAELDDLTE KIRKAHQETF PSLCQLGKYT TNSSADHRVR LDLGLWDKFS 
ELATKCIIKI VEFAKRLPGF TGLTIADQIT LLKAACLDIL ILRICTRYTP EQDTMTFSDG 
LTLNRTQMHN AGFGPLTDLV FTFANQLLPL EMDDTETGLL SAICLICGDR QDLEEPTKVD 
KLQEPLLEAL KIYIRKRRPS KPHMFPKILM KITDLRSISA KGTERVITLK MEIPGSMPPL 
IQEMLENSEG HEPLTPSSSG NTAEHSPSIS PSSVENSGVS QSPLVQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.