Details for: GALNT3
Gene ID: 2591
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: GALNT3
Ensembl ID: ENSG00000115339
Description: polypeptide N-acetylgalactosaminyltransferase 3
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 24.64rCSI 35.51%PRS 83.92
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CSI 21.22rCSI 46.47%PRS 82.14
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CSI 14.06rCSI 33.42%PRS 82.55
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CSI 11.97rCSI 34.23%PRS 84.03
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CSI 11.92rCSI 15.84%PRS 81.94
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CSI 11.73rCSI 9.23%PRS 81.86
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CSI 11.66rCSI 13.7%PRS 77.89
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CSI 11.33rCSI 13.68%PRS 84.11
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CSI 9.46rCSI 8.94%PRS 75.09
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CSI 9.13rCSI 24.61%PRS 81.56
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CSI 8.59rCSI 18.29%PRS 83.39
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CSI 8.54rCSI 7.51%PRS 64.64
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CSI 7.26rCSI 18.36%PRS 81.68
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CSI 6.51rCSI 5.78%PRS 73.94
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CSI 6.05rCSI 8.26%PRS 76.39
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CSI 5.83rCSI 11.83%PRS 54.12
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CSI 5.64rCSI 16.23%PRS 73.44
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CSI 5.01rCSI 5.8%PRS 80.72
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CSI 4.77rCSI 4.59%PRS 75.37
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CSI 4.72rCSI 4.05%PRS 83.14
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CSI 4.65rCSI 5.76%PRS 73.71
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CSI 4.47rCSI 6.87%PRS 66.63
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CSI 4.15rCSI 3.35%PRS 85.26
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CSI 3.95rCSI 5.84%PRS 87.47
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CSI 3.77rCSI 3.63%PRS 68.63
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CSI 3.74rCSI 19.66%PRS 82.77
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CSI 3.74rCSI 11.11%PRS 85.05
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CSI 3.65rCSI 2.7%PRS 68.99
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CSI 3.64rCSI 2.82%PRS 79.56
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CSI 3.55rCSI 3.7%PRS 75.58
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CSI 3.43rCSI 3.42%PRS 69.7
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CSI 3.43rCSI 4.27%PRS 77.3
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CSI 3.39rCSI 8.78%PRS 71.09
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CSI 3.32rCSI 4.45%PRS 74.97
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CSI 3.22rCSI 3.92%PRS 82.86
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CSI 3.2rCSI 5.15%PRS 75.92
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CSI 3.18rCSI 6.01%PRS 88.04
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CSI 3.12rCSI 3.07%PRS 78.74
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CSI 3.11rCSI 7.38%PRS 77.19
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CSI 3.06rCSI 4.95%PRS 71.34
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CSI 2.95rCSI 3.17%PRS 76.92
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CSI 2.92rCSI 6.66%PRS 67.19
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CSI 2.75rCSI 6.09%PRS 75.04
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CSI 2.72rCSI 3.97%PRS 80.98
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CSI 2.66rCSI 4.13%PRS 80.81
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CSI 2.64rCSI 6.69%PRS 65.99
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CSI 2.54rCSI 3.4%PRS 82.81
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CSI 2.46rCSI 6.1%PRS 75.38
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CSI 2.45rCSI 26.67%PRS 85.53
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CSI 2.43rCSI 3.71%PRS 76.39
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CSI 2.43rCSI 2.48%PRS 85.2
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CSI 2.35rCSI 3.34%PRS 72.5
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CSI 2.35rCSI 54.73%PRS 89.34
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CSI 2.33rCSI 1.94%PRS 76.56
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CSI 2.31rCSI 3.53%PRS 84.08
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CSI 2.29rCSI 22.49%PRS 88
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CSI 2.19rCSI 2.3%PRS 73.22
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CSI 2.08rCSI 2.18%PRS 79.23
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CSI 2.05rCSI 2.37%PRS 67.66
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CSI 1.97rCSI 4.18%PRS 88.46
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CSI 1.97rCSI 5.18%PRS 89.05
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CSI 1.89rCSI 3.43%PRS 87.23
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CSI 1.84rCSI 1.93%PRS 73.75
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CSI 1.82rCSI 3.98%PRS 84.29
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CSI 1.8rCSI 2.86%PRS 85.31
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CSI 1.79rCSI 2.63%PRS 70.71
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CSI 1.77rCSI 2.62%PRS 80.6
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CSI 1.73rCSI 1.84%PRS 82.04
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CSI 1.65rCSI 3.96%PRS 81.35
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CSI 1.63rCSI 1.94%PRS 91.09
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CSI 1.62rCSI 1.36%PRS 79.26
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CSI 1.52rCSI 2.19%PRS 77.49
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CSI 1.48rCSI 3.38%PRS 70.25
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CSI 1.42rCSI 2.09%PRS 86.03
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CSI 1.4rCSI 2.73%PRS 79.27
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CSI 1.4rCSI 4.9%PRS 85.11
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CSI 1.36rCSI 34.3%PRS 85.07
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CSI 1.33rCSI 1.02%PRS 78.22
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CSI 1.29rCSI 1.34%PRS 80.77
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CSI 1.28rCSI 1.95%PRS 85.51
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CSI 1.25rCSI 9.41%PRS 87.31
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CSI 1.17rCSI 1.78%PRS 80.12
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CSI 1.11rCSI 3.2%PRS 83.48
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CSI 1.06rCSI 2.97%PRS 84.09
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CSI 0.96rCSI 5.47%PRS 87.04
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CSI 0.89rCSI 3.38%PRS 66.55
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CSI 0.88rCSI 4.76%PRS 84.36
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CSI 0.84rCSI 2.84%PRS 75.18
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CSI 0.67rCSI 3.12%PRS 86.42
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CSI 0.65rCSI 4.01%PRS 93.94
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CSI 0.65rCSI 2.84%PRS 85.43
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CSI 0.62rCSI 2.47%PRS 85.44
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CSI 0.47rCSI 7.29%PRS 85.78
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CSI 0.36rCSI 1.58%PRS 84.25
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CSI 0.35rCSI 2.28%PRS 93.03
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 2693094369
Symbol: GALT3_HUMAN
Name: Polypeptide N-acetylgalactosaminyltransferase 3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8663203
Title: cDNA cloning and expression of a novel human UDP-N-acetyl-alpha-D-galactosamine polypeptide N-acetylgalactosaminyltransferase, GalNAc-T3.
PubMed ID: 8663203
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9295285
Title: Substrate specificities of three members of the human UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase family, GalNAc-T1, -T2, and -T3.
PubMed ID: 9295285
PubMed ID: 9394011
Title: Localization of three human polypeptide GalNAc-transferases in HeLa cells suggests initiation of O-linked glycosylation throughout the Golgi apparatus.
PubMed ID: 9394011
DOI: 10.1242/jcs.111.1.45
PubMed ID: 12708471
Title: Prognostic significance of UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-3 (GalNAc-T3) expression in patients with gastric carcinoma.
PubMed ID: 12708471
PubMed ID: 15133511
Title: Mutations in GALNT3, encoding a protein involved in O-linked glycosylation, cause familial tumoral calcinosis.
PubMed ID: 15133511
DOI: 10.1038/ng1358
PubMed ID: 15599692
Title: Identification of a recurrent mutation in GALNT3 demonstrates that hyperostosis-hyperphosphatemia syndrome and familial tumoral calcinosis are allelic disorders.
PubMed ID: 15599692
PubMed ID: 16638743
Title: Polypeptide GalNAc-transferase T3 and familial tumoral calcinosis. Secretion of fibroblast growth factor 23 requires O-glycosylation.
PubMed ID: 16638743
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 31932717
Title: Molecular basis for fibroblast growth factor 23 O-glycosylation by GalNAc-T3.
PubMed ID: 31932717
Sequence Information:
- Length: 633
- Mass: 72610
- Checksum: 3019B2DCCC19A584
- Sequence:
MAHLKRLVKL HIKRHYHKKF WKLGAVIFFF IIVLVLMQRE VSVQYSKEES RMERNMKNKN KMLDLMLEAV NNIKDAMPKM QIGAPVRQNI DAGERPCLQG YYTAAELKPV LDRPPQDSNA PGASGKAFKT TNLSVEEQKE KERGEAKHCF NAFASDRISL HRDLGPDTRP PECIEQKFKR CPPLPTTSVI IVFHNEAWST LLRTVHSVLY SSPAILLKEI ILVDDASVDE YLHDKLDEYV KQFSIVKIVR QRERKGLITA RLLGATVATA ETLTFLDAHC ECFYGWLEPL LARIAENYTA VVSPDIASID LNTFEFNKPS PYGSNHNRGN FDWSLSFGWE SLPDHEKQRR KDETYPIKTP TFAGGLFSIS KEYFEYIGSY DEEMEIWGGE NIEMSFRVWQ CGGQLEIMPC SVVGHVFRSK SPHSFPKGTQ VIARNQVRLA EVWMDEYKEI FYRRNTDAAK IVKQKAFGDL SKRFEIKHRL QCKNFTWYLN NIYPEVYVPD LNPVISGYIK SVGQPLCLDV GENNQGGKPL IMYTCHGLGG NQYFEYSAQH EIRHNIQKEL CLHAAQGLVQ LKACTYKGHK TVVTGEQIWE IQKDQLLYNP FLKMCLSANG EHPSLVSCNP SDPLQKWILS QND