Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 106.9142
Cell Significance Index: -16.6300 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 61.6220
Cell Significance Index: -15.6300 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 44.7144
Cell Significance Index: -18.4200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 41.8454
Cell Significance Index: -17.0000 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 36.5485
Cell Significance Index: -18.8000 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 17.8058
Cell Significance Index: -17.0000 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 14.2098
Cell Significance Index: -17.5200 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 7.1822
Cell Significance Index: -19.2400 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 5.5887
Cell Significance Index: 152.1200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 4.6890
Cell Significance Index: 243.5800 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 4.2904
Cell Significance Index: -9.3900 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 2.7162
Cell Significance Index: 441.7700 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 2.0448
Cell Significance Index: 44.3000 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 2.0139
Cell Significance Index: 18.5500 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.9969
Cell Significance Index: 217.2000 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 1.9754
Cell Significance Index: 29.6000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.9319
Cell Significance Index: 237.5400 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 1.8932
Cell Significance Index: 341.2800 - Cell Name: tuft cell of small intestine (CL0009080)
Fold Change: 1.8666
Cell Significance Index: 18.8300 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 1.7142
Cell Significance Index: 17.7400 - Cell Name: epithelial cell of urethra (CL1000296)
Fold Change: 1.6667
Cell Significance Index: 10.3200 - Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
Fold Change: 1.5729
Cell Significance Index: 9.6800 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 1.3841
Cell Significance Index: 8.6000 - Cell Name: peg cell (CL4033014)
Fold Change: 1.3487
Cell Significance Index: 31.1600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 1.2871
Cell Significance Index: 95.9300 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.2708
Cell Significance Index: 18.0900 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 1.2410
Cell Significance Index: 35.7600 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.1825
Cell Significance Index: 53.6000 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 0.8406
Cell Significance Index: 9.5500 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.7298
Cell Significance Index: 94.2900 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.7221
Cell Significance Index: 394.3600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.6851
Cell Significance Index: 14.5900 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.6181
Cell Significance Index: 28.8200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5521
Cell Significance Index: 498.4900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.5026
Cell Significance Index: 222.1900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.4789
Cell Significance Index: 13.3900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.4533
Cell Significance Index: 89.9700 - Cell Name: endocardial cell (CL0002350)
Fold Change: 0.4404
Cell Significance Index: 2.6000 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.4275
Cell Significance Index: 20.0900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.3616
Cell Significance Index: 61.7500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: 0.3452
Cell Significance Index: 215.5800 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.3449
Cell Significance Index: 65.6400 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.3435
Cell Significance Index: 33.9800 - Cell Name: prostate gland microvascular endothelial cell (CL2000059)
Fold Change: 0.3411
Cell Significance Index: 2.4500 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.3271
Cell Significance Index: 23.1400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.1424
Cell Significance Index: 5.0100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.1115
Cell Significance Index: 22.3700 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.0689
Cell Significance Index: 1.1600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0483
Cell Significance Index: 6.6300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0473
Cell Significance Index: 35.8300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0348
Cell Significance Index: 12.4900 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: 0.0343
Cell Significance Index: 3.9200 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0283
Cell Significance Index: 19.6000 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.0200
Cell Significance Index: 0.6400 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0082
Cell Significance Index: 0.2200 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0012
Cell Significance Index: 0.0700 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0001
Cell Significance Index: -0.2000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0014
Cell Significance Index: -1.0700 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0067
Cell Significance Index: -4.9200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0092
Cell Significance Index: -16.9000 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0111
Cell Significance Index: -17.1200 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0135
Cell Significance Index: -18.3400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0163
Cell Significance Index: -10.3500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0176
Cell Significance Index: -9.9200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0302
Cell Significance Index: -3.0900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0359
Cell Significance Index: -7.5600 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0434
Cell Significance Index: -19.7100 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0496
Cell Significance Index: -5.6800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0499
Cell Significance Index: -7.2500 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.0513
Cell Significance Index: -0.3100 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0520
Cell Significance Index: -0.7100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0644
Cell Significance Index: -18.5400 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0888
Cell Significance Index: -11.3900 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.0920
Cell Significance Index: -0.7500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1166
Cell Significance Index: -13.5900 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.1274
Cell Significance Index: -1.8800 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.1276
Cell Significance Index: -1.7900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.1364
Cell Significance Index: -3.4100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.1403
Cell Significance Index: -16.5500 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.1423
Cell Significance Index: -4.5000 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1485
Cell Significance Index: -9.1300 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.1541
Cell Significance Index: -1.6000 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1582
Cell Significance Index: -8.2400 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1668
Cell Significance Index: -17.3700 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.2119
Cell Significance Index: -7.7800 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2167
Cell Significance Index: -17.1600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.2204
Cell Significance Index: -16.9200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2254
Cell Significance Index: -9.9700 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: -0.2307
Cell Significance Index: -2.3800 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.2597
Cell Significance Index: -17.4600 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.2690
Cell Significance Index: -16.5000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.2691
Cell Significance Index: -16.9600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.2748
Cell Significance Index: -15.4200 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.2753
Cell Significance Index: -10.4300 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.2771
Cell Significance Index: -4.6600 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: -0.2934
Cell Significance Index: -4.8400 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2982
Cell Significance Index: -7.8400 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.2991
Cell Significance Index: -8.0000 - Cell Name: vascular lymphangioblast (CL0005022)
Fold Change: -0.3132
Cell Significance Index: -5.5400 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.3141
Cell Significance Index: -5.8100
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 4192574240
Symbol: JAM1_HUMAN
Name: Junctional adhesion molecule A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10395639
Title: Combined treatment of TNF-alpha and IFN-gamma causes redistribution of junctional adhesion molecule in human endothelial cells.
PubMed ID: 10395639
PubMed ID: 10753840
Title: Cloning of the human platelet F11 receptor: a cell adhesion molecule member of the immunoglobulin superfamily involved in platelet aggregation.
PubMed ID: 10753840
PubMed ID: 11171323
Title: Characterization and chromosomal localization of JAM-1, a platelet receptor for a stimulatory monoclonal antibody.
PubMed ID: 11171323
PubMed ID: 11230166
Title: Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.
PubMed ID: 11230166
DOI: 10.1101/gr.gr1547r
PubMed ID: 12975309
Title: The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
PubMed ID: 12975309
DOI: 10.1101/gr.1293003
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7646439
Title: Mechanisms of platelet activation by a stimulatory antibody: cross-linking of a novel platelet receptor for monoclonal antibody F11 with the Fc gamma RII receptor.
PubMed ID: 7646439
DOI: 10.1042/bj3100155
PubMed ID: 15340161
Title: Signal peptide prediction based on analysis of experimentally verified cleavage sites.
PubMed ID: 15340161
DOI: 10.1110/ps.04682504
PubMed ID: 12665801
Title: Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.
PubMed ID: 12665801
DOI: 10.1038/nbt810
PubMed ID: 11489913
Title: Junctional adhesion molecule (JAM) binds to PAR-3: a possible mechanism for the recruitment of PAR-3 to tight junctions.
PubMed ID: 11489913
PubMed ID: 11239401
Title: Junction adhesion molecule is a receptor for reovirus.
PubMed ID: 11239401
PubMed ID: 11812992
Title: JAM-1 is a ligand of the beta(2) integrin LFA-1 involved in transendothelial migration of leukocytes.
PubMed ID: 11812992
DOI: 10.1038/ni755
PubMed ID: 12810109
Title: Leukocyte-endothelial-cell interactions in leukocyte transmigration and the inflammatory response.
PubMed ID: 12810109
PubMed ID: 15528364
Title: The functional interaction of the beta 2 integrin lymphocyte function-associated antigen-1 with junctional adhesion molecule-A is mediated by the I domain.
PubMed ID: 15528364
PubMed ID: 18088087
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19159218
Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
PubMed ID: 19159218
DOI: 10.1021/pr8008012
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 25481868
Title: The tight junction protein JAM-A functions as coreceptor for rotavirus entry into MA104 cells.
PubMed ID: 25481868
PubMed ID: 33970782
Title: Helicobacter pylori PqqE is a new virulence factor that cleaves junctional adhesion molecule A and disrupts gastric epithelial integrity.
PubMed ID: 33970782
PubMed ID: 35067832
Title: JAM-A interacts with alpha3beta1 integrin and tetraspanins CD151 and CD9 to regulate collective cell migration of polarized epithelial cells.
PubMed ID: 35067832
PubMed ID: 12697893
Title: Crystal structure of human junctional adhesion molecule 1: implications for reovirus binding.
PubMed ID: 12697893
Sequence Information:
- Length: 299
- Mass: 32583
- Checksum: D95DE2FEA23D2851
- Sequence:
MGTKAQVERK LLCLFILAIL LCSLALGSVT VHSSEPEVRI PENNPVKLSC AYSGFSSPRV EWKFDQGDTT RLVCYNNKIT ASYEDRVTFL PTGITFKSVT REDTGTYTCM VSEEGGNSYG EVKVKLIVLV PPSKPTVNIP SSATIGNRAV LTCSEQDGSP PSEYTWFKDG IVMPTNPKST RAFSNSSYVL NPTTGELVFD PLSASDTGEY SCEARNGYGT PMTSNAVRME AVERNVGVIV AAVLVTLILL GILVFGIWFA YSRGHFDRTK KGTSSKKVIY SQPSARSEGE FKQTSSFLV
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.