Details for: PMEL
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 26.7446
Cell Significance Index: -4.1600 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 16.7164
Cell Significance Index: -4.2400 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 3.4389
Cell Significance Index: -4.2400 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 2.2105
Cell Significance Index: 30.1600 - Cell Name: epithelial cell of lacrimal sac (CL1000436)
Fold Change: 2.1428
Cell Significance Index: 15.4200 - Cell Name: epidermal cell (CL0000362)
Fold Change: 1.6013
Cell Significance Index: 3.6100 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 0.6899
Cell Significance Index: -1.5100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.6636
Cell Significance Index: 126.3000 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.6519
Cell Significance Index: 9.3400 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 0.5226
Cell Significance Index: 7.3400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.4458
Cell Significance Index: 23.1600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.4411
Cell Significance Index: 43.6300 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.4000
Cell Significance Index: 3.4000 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.3238
Cell Significance Index: 292.3600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.3037
Cell Significance Index: 18.2300 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.2856
Cell Significance Index: 31.0700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.2415
Cell Significance Index: 39.2800 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.2258
Cell Significance Index: 6.0300 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.2196
Cell Significance Index: 13.8400 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.2115
Cell Significance Index: 3.0700 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.2058
Cell Significance Index: 2.1300 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.1944
Cell Significance Index: 1.7900 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1687
Cell Significance Index: 317.6600 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.1374
Cell Significance Index: 9.5100 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.1152
Cell Significance Index: 5.2200 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.1096
Cell Significance Index: 21.7500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.1095
Cell Significance Index: 19.7400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.1076
Cell Significance Index: 12.5400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1019
Cell Significance Index: 45.0500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 0.0971
Cell Significance Index: 10.1100 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.0869
Cell Significance Index: 3.0200 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0855
Cell Significance Index: 2.4600 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.0827
Cell Significance Index: 2.2200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.0739
Cell Significance Index: 1.6000 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0725
Cell Significance Index: 1.2400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0559
Cell Significance Index: 1.1900 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.0555
Cell Significance Index: 1.4600 - Cell Name: endocardial cell (CL0002350)
Fold Change: 0.0406
Cell Significance Index: 0.2400 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.0338
Cell Significance Index: 0.9700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0167
Cell Significance Index: 0.7800 - Cell Name: melanocyte (CL0000148)
Fold Change: 0.0149
Cell Significance Index: 0.1400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0119
Cell Significance Index: 0.6700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0111
Cell Significance Index: 7.0400 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0080
Cell Significance Index: 0.2000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0076
Cell Significance Index: 4.1400 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0072
Cell Significance Index: 0.8900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0052
Cell Significance Index: 1.0400 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0048
Cell Significance Index: 2.1900 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0046
Cell Significance Index: 7.1200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0025
Cell Significance Index: 4.6600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0017
Cell Significance Index: 0.6000 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0014
Cell Significance Index: 0.0500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.0013
Cell Significance Index: 0.1900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.0000
Cell Significance Index: 0.0000 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0004
Cell Significance Index: -0.5800 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.0019
Cell Significance Index: -0.0300 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0025
Cell Significance Index: -0.3200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0027
Cell Significance Index: -0.4600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0048
Cell Significance Index: -3.5200 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0049
Cell Significance Index: -3.7100 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0058
Cell Significance Index: -4.2700 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0068
Cell Significance Index: -4.2400 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0074
Cell Significance Index: -4.1900 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0086
Cell Significance Index: -2.4700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0094
Cell Significance Index: -1.2900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0100
Cell Significance Index: -1.1500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0142
Cell Significance Index: -0.4600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0190
Cell Significance Index: -1.9400 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0207
Cell Significance Index: -4.3500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0210
Cell Significance Index: -1.2900 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0214
Cell Significance Index: -1.5100 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0224
Cell Significance Index: -2.9000 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0286
Cell Significance Index: -2.1300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0319
Cell Significance Index: -0.8200 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0344
Cell Significance Index: -4.0600 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0389
Cell Significance Index: -2.3900 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: -0.0400
Cell Significance Index: -0.3800 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: -0.0402
Cell Significance Index: -0.5200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0409
Cell Significance Index: -3.1400 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0445
Cell Significance Index: -1.2100 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.0447
Cell Significance Index: -0.6700 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0455
Cell Significance Index: -3.0600 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0477
Cell Significance Index: -3.7800 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0482
Cell Significance Index: -0.9400 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: -0.0483
Cell Significance Index: -0.5200 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0619
Cell Significance Index: -3.1300 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.0621
Cell Significance Index: -0.7100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0626
Cell Significance Index: -2.9400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0645
Cell Significance Index: -4.1600 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.0727
Cell Significance Index: -1.0200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.0731
Cell Significance Index: -1.6000 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.0750
Cell Significance Index: -1.1300 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.0784
Cell Significance Index: -1.9000 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: -0.0795
Cell Significance Index: -0.9000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0807
Cell Significance Index: -1.6800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0861
Cell Significance Index: -4.5200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0873
Cell Significance Index: -3.8600 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0905
Cell Significance Index: -3.1700 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.0910
Cell Significance Index: -1.9100 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0916
Cell Significance Index: -3.9800
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3079798567
Symbol: PMEL_HUMAN
Name: Melanocyte protein PMEL
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1924386
Title: A melanocyte-specific gene, Pmel 17, maps near the silver coat color locus on mouse chromosome 10 and is in a syntenic region on human chromosome 12.
PubMed ID: 1924386
PubMed ID: 8179825
Title: Cloning and expression of the gene for the melanoma-associated ME20 antigen.
PubMed ID: 8179825
PubMed ID: 7519602
Title: Molecular characterization of the melanocyte lineage-specific antigen gp100.
PubMed ID: 7519602
PubMed ID: 8022805
Title: Identification of a human melanoma antigen recognized by tumor-infiltrating lymphocytes associated with in vivo tumor rejection.
PubMed ID: 8022805
PubMed ID: 8592076
Title: Genomic organization and sequence of D12S53E (Pmel 17), the human homologue of the mouse silver (si) locus.
PubMed ID: 8592076
PubMed ID: 8739560
Title: Genomic organization and FISH mapping of human Pmel 17, the putative silver locus.
PubMed ID: 8739560
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16541075
Title: The finished DNA sequence of human chromosome 12.
PubMed ID: 16541075
DOI: 10.1038/nature04569
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14632201
Title: A novel splice variant of Pmel17 expressed by human melanocytes and melanoma cells lacking some of the internal repeats.
PubMed ID: 14632201
PubMed ID: 7706734
Title: Recognition of multiple epitopes in the human melanoma antigen gp100 by tumor-infiltrating T lymphocytes associated with in vivo tumor regression.
PubMed ID: 7706734
PubMed ID: 11694580
Title: Pmel17 initiates premelanosome morphogenesis within multivesicular bodies.
PubMed ID: 11694580
PubMed ID: 12732614
Title: Proprotein convertase cleavage liberates a fibrillogenic fragment of a resident glycoprotein to initiate melanosome biogenesis.
PubMed ID: 12732614
PubMed ID: 12643545
Title: Proteomic analysis of early melanosomes: identification of novel melanosomal proteins.
PubMed ID: 12643545
DOI: 10.1021/pr025562r
PubMed ID: 15096515
Title: Epitope mapping of the melanosomal matrix protein gp100 (PMEL17): rapid processing in the endoplasmic reticulum and glycosylation in the early Golgi compartment.
PubMed ID: 15096515
PubMed ID: 15695812
Title: MART-1 is required for the function of the melanosomal matrix protein PMEL17/GP100 and the maturation of melanosomes.
PubMed ID: 15695812
PubMed ID: 16682408
Title: The repeat domain of the melanosomal matrix protein PMEL17/GP100 is required for the formation of organellar fibers.
PubMed ID: 16682408
PubMed ID: 17081065
Title: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.
PubMed ID: 17081065
DOI: 10.1021/pr060363j
PubMed ID: 16760433
Title: Dual loss of ER export and endocytic signals with altered melanosome morphology in the silver mutation of Pmel17.
PubMed ID: 16760433
PubMed ID: 17991747
Title: Premelanosome amyloid-like fibrils are composed of only Golgi-processed forms of Pmel17 that have been proteolytically processed in endosomes.
PubMed ID: 17991747
PubMed ID: 19047044
Title: Formation of Pmel17 amyloid is regulated by juxtamembrane metalloproteinase cleavage, and the resulting C-terminal fragment is a substrate for gamma-secretase.
PubMed ID: 19047044
PubMed ID: 21962903
Title: The tetraspanin CD63 regulates ESCRT-independent and -dependent endosomal sorting during melanogenesis.
PubMed ID: 21962903
PubMed ID: 23754390
Title: BACE2 processes PMEL to form the melanosome amyloid matrix in pigment cells.
PubMed ID: 23754390
PubMed ID: 26387950
Title: Apolipoprotein E Regulates Amyloid Formation within Endosomes of Pigment Cells.
PubMed ID: 26387950
PubMed ID: 26694611
Title: The Kringle-like Domain Facilitates Post-endoplasmic Reticulum Changes to Premelanosome Protein (PMEL) Oligomerization and Disulfide Bond Configuration and Promotes Amyloid Formation.
PubMed ID: 26694611
PubMed ID: 28272432
Title: Melanosomal formation of PMEL core amyloid is driven by aromatic residues.
PubMed ID: 28272432
DOI: 10.1038/srep44064
PubMed ID: 30988362
Title: Repeat domain-associated O-glycans govern PMEL fibrillar sheet architecture.
PubMed ID: 30988362
Sequence Information:
- Length: 661
- Mass: 70255
- Checksum: 8A904FAB16715653
- Sequence:
MDLVLKRCLL HLAVIGALLA VGATKVPRNQ DWLGVSRQLR TKAWNRQLYP EWTEAQRLDC WRGGQVSLKV SNDGPTLIGA NASFSIALNF PGSQKVLPDG QVIWVNNTII NGSQVWGGQP VYPQETDDAC IFPDGGPCPS GSWSQKRSFV YVWKTWGQYW QVLGGPVSGL SIGTGRAMLG THTMEVTVYH RRGSRSYVPL AHSSSAFTIT DQVPFSVSVS QLRALDGGNK HFLRNQPLTF ALQLHDPSGY LAEADLSYTW DFGDSSGTLI SRALVVTHTY LEPGPVTAQV VLQAAIPLTS CGSSPVPGTT DGHRPTAEAP NTTAGQVPTT EVVGTTPGQA PTAEPSGTTS VQVPTTEVIS TAPVQMPTAE STGMTPEKVP VSEVMGTTLA EMSTPEATGM TPAEVSIVVL SGTTAAQVTT TEWVETTARE LPIPEPEGPD ASSIMSTESI TGSLGPLLDG TATLRLVKRQ VPLDCVLYRY GSFSVTLDIV QGIESAEILQ AVPSGEGDAF ELTVSCQGGL PKEACMEISS PGCQPPAQRL CQPVLPSPAC QLVLHQILKG GSGTYCLNVS LADTNSLAVV STQLIMPGQE AGLGQVPLIV GILLVLMAVV LASLIYRRRL MKQDFSVPQL PHSSSHWLRL PRIFCSCPIG ENSPLLSGQQ V
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.