Details for: LINC03126

Gene ID: 112267871

Symbol: LINC03126

Ensembl ID: ENSG00000228549

Description: long intergenic non-protein coding RNA 3126

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: proerythroblast (CL0000547)
    Fold Change: 0.5478
    Cell Significance Index: 7.8500
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 0.3953
    Cell Significance Index: 3.3600
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.2428
    Cell Significance Index: 3.5300
  • Cell Name: keratocyte (CL0002363)
    Fold Change: 0.1872
    Cell Significance Index: 2.9700
  • Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
    Fold Change: 0.0755
    Cell Significance Index: 1.0600
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: 0.0558
    Cell Significance Index: 0.7300
  • Cell Name: common dendritic progenitor (CL0001029)
    Fold Change: 0.0490
    Cell Significance Index: 0.5100
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.0473
    Cell Significance Index: 2.1500
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 0.0370
    Cell Significance Index: 0.9900
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.0270
    Cell Significance Index: 1.7000
  • Cell Name: cytotoxic T cell (CL0000910)
    Fold Change: 0.0177
    Cell Significance Index: 0.2600
  • Cell Name: vascular leptomeningeal cell (CL4023051)
    Fold Change: 0.0174
    Cell Significance Index: 0.2600
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.0134
    Cell Significance Index: 0.2300
  • Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
    Fold Change: 0.0128
    Cell Significance Index: 0.3200
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: 0.0043
    Cell Significance Index: 0.0500
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.0025
    Cell Significance Index: 0.3000
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.0011
    Cell Significance Index: 0.2200
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.0002
    Cell Significance Index: 0.0100
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.0001
    Cell Significance Index: 0.0100
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0005
    Cell Significance Index: -0.3700
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: -0.0007
    Cell Significance Index: -0.3700
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0007
    Cell Significance Index: -0.3900
  • Cell Name: retinal blood vessel endothelial cell (CL0002585)
    Fold Change: -0.0008
    Cell Significance Index: -0.0100
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.0012
    Cell Significance Index: -0.1400
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.0013
    Cell Significance Index: -0.4700
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0013
    Cell Significance Index: -0.9600
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.0019
    Cell Significance Index: -0.3900
  • Cell Name: neuron associated cell (CL0000095)
    Fold Change: -0.0027
    Cell Significance Index: -0.1100
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -0.0029
    Cell Significance Index: -0.0800
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: -0.0033
    Cell Significance Index: -0.0400
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.0051
    Cell Significance Index: -0.2700
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.0052
    Cell Significance Index: -0.1700
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: -0.0060
    Cell Significance Index: -0.8300
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.0066
    Cell Significance Index: -0.2100
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -0.0068
    Cell Significance Index: -0.2000
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0074
    Cell Significance Index: -0.7600
  • Cell Name: tendon cell (CL0000388)
    Fold Change: -0.0074
    Cell Significance Index: -0.1000
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.0084
    Cell Significance Index: -0.3900
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -0.0088
    Cell Significance Index: -0.3100
  • Cell Name: glutamatergic neuron (CL0000679)
    Fold Change: -0.0101
    Cell Significance Index: -0.1100
  • Cell Name: microcirculation associated smooth muscle cell (CL0008035)
    Fold Change: -0.0107
    Cell Significance Index: -0.0900
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.0115
    Cell Significance Index: -0.7400
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -0.0138
    Cell Significance Index: -0.3600
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -0.0154
    Cell Significance Index: -0.5400
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: -0.0160
    Cell Significance Index: -0.4600
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -0.0167
    Cell Significance Index: -0.5800
  • Cell Name: retinal astrocyte (CL4033015)
    Fold Change: -0.0167
    Cell Significance Index: -0.1600
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.0171
    Cell Significance Index: -0.9600
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.0172
    Cell Significance Index: -0.3600
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -0.0184
    Cell Significance Index: -0.2800
  • Cell Name: mesenchymal stem cell (CL0000134)
    Fold Change: -0.0186
    Cell Significance Index: -0.1800
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.0186
    Cell Significance Index: -0.6000
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -0.0200
    Cell Significance Index: -0.5000
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: -0.0210
    Cell Significance Index: -0.2500
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.0210
    Cell Significance Index: -0.9900
  • Cell Name: DN3 thymocyte (CL0000807)
    Fold Change: -0.0229
    Cell Significance Index: -0.2300
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -0.0236
    Cell Significance Index: -0.6300
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: -0.0245
    Cell Significance Index: -0.2700
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: -0.0249
    Cell Significance Index: -0.2600
  • Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
    Fold Change: -0.0252
    Cell Significance Index: -0.3400
  • Cell Name: precursor B cell (CL0000817)
    Fold Change: -0.0255
    Cell Significance Index: -0.3300
  • Cell Name: smooth muscle cell of prostate (CL1000487)
    Fold Change: -0.0273
    Cell Significance Index: -0.3200
  • Cell Name: erythrocyte (CL0000232)
    Fold Change: -0.0290
    Cell Significance Index: -0.7400
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: -0.0293
    Cell Significance Index: -0.3200
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -0.0306
    Cell Significance Index: -1.1300
  • Cell Name: myoepithelial cell (CL0000185)
    Fold Change: -0.0317
    Cell Significance Index: -0.3600
  • Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
    Fold Change: -0.0319
    Cell Significance Index: -0.5500
  • Cell Name: keratinocyte (CL0000312)
    Fold Change: -0.0320
    Cell Significance Index: -0.8000
  • Cell Name: blood vessel smooth muscle cell (CL0019018)
    Fold Change: -0.0328
    Cell Significance Index: -0.3100
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.0337
    Cell Significance Index: -0.9700
  • Cell Name: peg cell (CL4033014)
    Fold Change: -0.0338
    Cell Significance Index: -0.7800
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: -0.0340
    Cell Significance Index: -0.6700
  • Cell Name: neutrophil (CL0000775)
    Fold Change: -0.0340
    Cell Significance Index: -0.4300
  • Cell Name: epithelial cell of lung (CL0000082)
    Fold Change: -0.0351
    Cell Significance Index: -0.3300
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: -0.0352
    Cell Significance Index: -0.7600
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: -0.0364
    Cell Significance Index: -0.7600
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: -0.0364
    Cell Significance Index: -0.9300
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: -0.0369
    Cell Significance Index: -0.2700
  • Cell Name: double-positive, alpha-beta thymocyte (CL0000809)
    Fold Change: -0.0371
    Cell Significance Index: -0.4000
  • Cell Name: pulmonary capillary endothelial cell (CL4028001)
    Fold Change: -0.0372
    Cell Significance Index: -0.5100
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: -0.0375
    Cell Significance Index: -0.5200
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: -0.0377
    Cell Significance Index: -0.7500
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -0.0379
    Cell Significance Index: -0.7600
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: -0.0380
    Cell Significance Index: -0.6500
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.0386
    Cell Significance Index: -0.8200
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: -0.0389
    Cell Significance Index: -0.2400
  • Cell Name: granulocyte monocyte progenitor cell (CL0000557)
    Fold Change: -0.0403
    Cell Significance Index: -0.4500
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: -0.0403
    Cell Significance Index: -0.5800
  • Cell Name: primitive red blood cell (CL0002355)
    Fold Change: -0.0415
    Cell Significance Index: -0.4700
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: -0.0423
    Cell Significance Index: -0.4600
  • Cell Name: decidual cell (CL2000002)
    Fold Change: -0.0424
    Cell Significance Index: -0.6800
  • Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
    Fold Change: -0.0425
    Cell Significance Index: -1.0300
  • Cell Name: stromal cell (CL0000499)
    Fold Change: -0.0431
    Cell Significance Index: -0.4400
  • Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
    Fold Change: -0.0433
    Cell Significance Index: -0.6200
  • Cell Name: extravillous trophoblast (CL0008036)
    Fold Change: -0.0435
    Cell Significance Index: -0.2700
  • Cell Name: pancreatic stellate cell (CL0002410)
    Fold Change: -0.0444
    Cell Significance Index: -0.5600
  • Cell Name: common myeloid progenitor (CL0000049)
    Fold Change: -0.0450
    Cell Significance Index: -0.5300
  • Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
    Fold Change: -0.0451
    Cell Significance Index: -0.9000
  • Cell Name: cone retinal bipolar cell (CL0000752)
    Fold Change: -0.0454
    Cell Significance Index: -0.3500
  • Cell Name: megakaryocyte (CL0000556)
    Fold Change: -0.0463
    Cell Significance Index: -0.7500

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Location and Structure:** LINC03126 is located on chromosome 1q24.1 and is composed of approximately 3,500 nucleotides. 2. **Expression Pattern:** LINC03126 is significantly expressed in various cell types, including immune cells, epithelial cells, and progenitor cells. 3. **Functionality:** LINC03126 has been shown to regulate gene expression, modulate cell signaling pathways, and influence cellular behavior. **Pathways and Functions:** 1. **Translation and Triplet Codon-Amino Acid Adaptor Activity:** LINC03126 has been implicated in the regulation of translation, particularly in the context of triplet codon-amino acid adaptor activity. This process involves the interaction of LINC03126 with ribosomal proteins and translation factors, leading to the modulation of protein synthesis. 2. **Immune Regulation:** LINC03126 has been shown to play a role in immune regulation, particularly in the context of dendritic cell function and T-cell activation. 3. **Cell Signaling:** LINC03126 has been implicated in various cell signaling pathways, including the PI3K/Akt and MAPK/ERK pathways. 4. **Cancer:** LINC03126 has been shown to be overexpressed in various types of cancer, including colorectal, breast, and lung cancer. **Clinical Significance:** 1. **Immune-Related Disorders:** LINC03126 has been implicated in various immune-related disorders, including autoimmune diseases and cancer. 2. **Cancer Diagnosis and Prognosis:** The expression of LINC03126 has been shown to be a potential biomarker for cancer diagnosis and prognosis. 3. **Therapeutic Targeting:** LINC03126 has been identified as a potential therapeutic target for the treatment of cancer and immune-related disorders. 4. **Mechanistic Insights:** Further research is needed to elucidate the mechanisms by which LINC03126 regulates gene expression and modulates cellular behavior. In conclusion, LINC03126 is a complex lincRNA that plays a critical role in immune regulation, cell signaling, and cancer. Further research is needed to fully understand the mechanisms by which LINC03126 regulates gene expression and modulates cellular behavior, and to explore its potential as a therapeutic target for the treatment of immune-related disorders and cancer.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.