Details for: GFAP
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: 6.7608
Cell Significance Index: 94.5400 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 3.6001
Cell Significance Index: 40.0100 - Cell Name: glioblast (CL0000030)
Fold Change: 0.6736
Cell Significance Index: 4.2300 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.5174
Cell Significance Index: 31.7200 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.2857
Cell Significance Index: 4.9400 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.2146
Cell Significance Index: 13.1900 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.0928
Cell Significance Index: 83.7600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0618
Cell Significance Index: 11.7700 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0312
Cell Significance Index: 11.1900 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.0149
Cell Significance Index: 0.1700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0092
Cell Significance Index: -0.5800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0092
Cell Significance Index: -17.2700 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0136
Cell Significance Index: -25.0600 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0160
Cell Significance Index: -24.5600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0185
Cell Significance Index: -25.1300 - Cell Name: colon goblet cell (CL0009039)
Fold Change: -0.0230
Cell Significance Index: -2.2800 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0270
Cell Significance Index: -19.8000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0282
Cell Significance Index: -21.3200 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0291
Cell Significance Index: -18.4900 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0320
Cell Significance Index: -23.6700 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0336
Cell Significance Index: -6.7400 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0360
Cell Significance Index: -19.6500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0417
Cell Significance Index: -23.5100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0457
Cell Significance Index: -20.7300 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: -0.0468
Cell Significance Index: -7.6200 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0507
Cell Significance Index: -1.7800 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0563
Cell Significance Index: -16.2000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0632
Cell Significance Index: -4.2500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0961
Cell Significance Index: -19.0700 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0975
Cell Significance Index: -17.5900 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1087
Cell Significance Index: -11.1100 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.1127
Cell Significance Index: -3.1500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1194
Cell Significance Index: -25.1500 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.1289
Cell Significance Index: -3.3100 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: -0.1298
Cell Significance Index: -14.1200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.1326
Cell Significance Index: -22.6500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1375
Cell Significance Index: -19.9900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1441
Cell Significance Index: -19.7900 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.1444
Cell Significance Index: -17.7600 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.1456
Cell Significance Index: -6.6000 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.1694
Cell Significance Index: -4.2300 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1696
Cell Significance Index: -19.7600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1713
Cell Significance Index: -19.6300 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1773
Cell Significance Index: -22.9100 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.1804
Cell Significance Index: -4.3700 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.2291
Cell Significance Index: -12.0300 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: -0.2410
Cell Significance Index: -16.6700 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2505
Cell Significance Index: -19.8400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.2690
Cell Significance Index: -7.7500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.2838
Cell Significance Index: -21.7800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.3201
Cell Significance Index: -23.8600 - Cell Name: macroglial cell (CL0000126)
Fold Change: -0.3260
Cell Significance Index: -3.7800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.3441
Cell Significance Index: -17.9300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.3544
Cell Significance Index: -8.8600 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.3723
Cell Significance Index: -4.2300 - Cell Name: mesothelial cell of epicardium (CL0011019)
Fold Change: -0.3828
Cell Significance Index: -3.3100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.3868
Cell Significance Index: -18.1800 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3976
Cell Significance Index: -22.3100 - Cell Name: neural cell (CL0002319)
Fold Change: -0.4397
Cell Significance Index: -5.1300 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.4405
Cell Significance Index: -6.0100 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.4685
Cell Significance Index: -13.3700 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.4911
Cell Significance Index: -17.2100 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: -0.4950
Cell Significance Index: -3.3500 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.4951
Cell Significance Index: -21.9000 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.5162
Cell Significance Index: -12.3800 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.5272
Cell Significance Index: -24.5800 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.5330
Cell Significance Index: -27.6900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.5376
Cell Significance Index: -17.6000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.5501
Cell Significance Index: -17.5200 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.5646
Cell Significance Index: -21.3800 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.5666
Cell Significance Index: -16.6900 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.5684
Cell Significance Index: -12.1500 - Cell Name: Mueller cell (CL0000636)
Fold Change: -0.5927
Cell Significance Index: -4.5600 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.6042
Cell Significance Index: -13.0900 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.6715
Cell Significance Index: -16.7500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.6851
Cell Significance Index: -11.7400 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.7053
Cell Significance Index: -17.9700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.7092
Cell Significance Index: -15.5300 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.7099
Cell Significance Index: -14.4500 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: -0.7125
Cell Significance Index: -7.0500 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.7202
Cell Significance Index: -17.9600 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.7343
Cell Significance Index: -15.8700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.7430
Cell Significance Index: -15.7700 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.7500
Cell Significance Index: -19.7200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.7576
Cell Significance Index: -20.2300 - Cell Name: glial cell (CL0000125)
Fold Change: -0.7598
Cell Significance Index: -8.3300 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.7968
Cell Significance Index: -21.3500 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.7992
Cell Significance Index: -16.6800 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.8115
Cell Significance Index: -19.8000 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.8139
Cell Significance Index: -41.1300 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.8149
Cell Significance Index: -16.3600 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.8178
Cell Significance Index: -16.1700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.8201
Cell Significance Index: -23.5100 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.8226
Cell Significance Index: -17.5200 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: -0.8237
Cell Significance Index: -14.0800 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.8288
Cell Significance Index: -22.5600 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: -0.8681
Cell Significance Index: -8.2600 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.8808
Cell Significance Index: -36.0900 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.8980
Cell Significance Index: -17.6800 - Cell Name: ependymal cell (CL0000065)
Fold Change: -0.9250
Cell Significance Index: -10.9000
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 4147877849
Symbol: GFAP_HUMAN
Name: Glial fibrillary acidic protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2740350
Title: Molecular cloning and primary structure of human glial fibrillary acidic protein.
PubMed ID: 2740350
PubMed ID: 2163003
Title: Characterization of human cDNA and genomic clones for glial fibrillary acidic protein.
PubMed ID: 2163003
PubMed ID: 1847665
Title: Human glial fibrillary acidic protein: complementary DNA cloning, chromosome localization, and messenger RNA expression in human glioma cell lines of various phenotypes.
PubMed ID: 1847665
PubMed ID: 1636374
Title: Human glial fibrillary acidic protein (GFAP): molecular cloning of the complete cDNA sequence and chromosomal localization (chromosome 17) of the GFAP gene.
PubMed ID: 1636374
DOI: 10.1007/bf00299404
PubMed ID: 9693047
Title: Determination of the gene structure of human GFAP and absence of coding region mutations associated with frontotemporal dementia with parkinsonism linked to chromosome 17.
PubMed ID: 9693047
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 16625196
Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
PubMed ID: 16625196
DOI: 10.1038/nature04689
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2349237
Title: An RNA polymerase II promoter containing sequences upstream and downstream from the RNA startpoint that direct initiation of transcription from the same site.
PubMed ID: 2349237
PubMed ID: 2780570
Title: Changes in brain gene expression shared by scrapie and Alzheimer disease.
PubMed ID: 2780570
PubMed ID: 17203480
Title: Identification and characterization of GFAPkappa, a novel glial fibrillary acidic protein isoform.
PubMed ID: 17203480
DOI: 10.1002/glia.20475
PubMed ID: 12058025
Title: A new splice variant of glial fibrillary acidic protein GFAPepsilon, interacts with the presenilin proteins.
PubMed ID: 12058025
PubMed ID: 12837269
Title: Genetic polymorphism and sequence evolution of an alternatively spliced exon of the glial fibrillary acidic protein gene, GFAP.
PubMed ID: 12837269
PubMed ID: 9175763
Title: Domain-specific phosphorylation of vimentin and glial fibrillary acidic protein by PKN.
PubMed ID: 9175763
PubMed ID: 9099667
Title: Phosphorylation of glial fibrillary acidic protein at the same sites by cleavage furrow kinase and Rho-associated kinase.
PubMed ID: 9099667
PubMed ID: 12686604
Title: Functional significance of the specific sites phosphorylated in desmin at cleavage furrow: Aurora-B may phosphorylate and regulate type III intermediate filaments during cytokinesis coordinatedly with Rho-kinase.
PubMed ID: 12686604
PubMed ID: 23828821
Title: Identification and Characterization of citrulline-modified brain proteins by combining HCD and CID fragmentation.
PubMed ID: 23828821
PubMed ID: 11138011
Title: Mutations in GFAP, encoding glial fibrillary acidic protein, are associated with Alexander disease.
PubMed ID: 11138011
DOI: 10.1038/83679
PubMed ID: 11567214
Title: Infantile Alexander disease: spectrum of GFAP mutations and genotype-phenotype correlation.
PubMed ID: 11567214
DOI: 10.1086/323799
PubMed ID: 11595337
Title: A novel mutation in glial fibrillary acidic protein gene in a patient with Alexander disease.
PubMed ID: 11595337
PubMed ID: 12034785
Title: Molecular findings in symptomatic and pre-symptomatic Alexander disease patients.
PubMed ID: 12034785
PubMed ID: 12034796
Title: Juvenile Alexander disease with a novel mutation in glial fibrillary acidic protein gene.
PubMed ID: 12034796
PubMed ID: 12975300
Title: Adult Alexander disease with autosomal dominant transmission: a distinct entity caused by mutation in the glial fibrillary acid protein gene.
PubMed ID: 12975300
PubMed ID: 12581808
Title: Molecular genetic study in Japanese patients with Alexander disease: a novel mutation, R79L.
PubMed ID: 12581808
PubMed ID: 12944715
Title: A novel GFAP mutation and disseminated white matter lesions: adult Alexander disease?
PubMed ID: 12944715
DOI: 10.1159/000072507
PubMed ID: 15030911
Title: A case of infantile Alexander disease with a milder phenotype and a novel GFAP mutation, L90P.
PubMed ID: 15030911
PubMed ID: 15732097
Title: Glial fibrillary acidic protein mutations in infantile, juvenile, and adult forms of Alexander disease.
PubMed ID: 15732097
DOI: 10.1002/ana.20406
PubMed ID: 17043438
Title: A case of infantile Alexander disease accompanied by infantile spasms diagnosed by DNA analysis.
PubMed ID: 17043438
PubMed ID: 17805552
Title: Alexander disease with occipital predominance and a novel c.799G>C mutation in the GFAP gene.
PubMed ID: 17805552
PubMed ID: 17894839
Title: GFAP mutations and polymorphisms in 13 unrelated Italian patients affected by Alexander disease.
PubMed ID: 17894839
PubMed ID: 17934883
Title: An adult form of Alexander disease: a novel mutation in glial fibrillary acidic protein.
PubMed ID: 17934883
PubMed ID: 18079314
Title: Clinical and genetic study in Chinese patients with Alexander disease.
PubMed ID: 18079314
PubMed ID: 18004641
Title: Adult-onset Alexander disease: report on a family.
PubMed ID: 18004641
PubMed ID: 17960815
Title: Adult-onset Alexander disease with progressive ataxia and palatal tremor.
PubMed ID: 17960815
DOI: 10.1002/mds.21774
PubMed ID: 19412928
Title: Novel GFAP mutation in patient with adult-onset Alexander disease presenting with spastic ataxia.
PubMed ID: 19412928
DOI: 10.1002/mds.22556
PubMed ID: 20359319
Title: Adult-onset Alexander disease with typical 'tadpole' brainstem atrophy and unusual bilateral basal ganglia involvement: a case report and review of the literature.
PubMed ID: 20359319
PubMed ID: 21917775
Title: GFAP mutations, age at onset, and clinical subtypes in Alexander disease.
PubMed ID: 21917775
PubMed ID: 23364391
Title: Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations.
PubMed ID: 23364391
DOI: 10.1038/jhg.2012.152
PubMed ID: 23743246
Title: Familial adult-onset Alexander disease with a novel mutation (D78N) in the glial fibrillary acidic protein gene with unusual bilateral basal ganglia involvement.
PubMed ID: 23743246
PubMed ID: 24742911
Title: Diagnosis by whole exome sequencing of atypical infantile onset Alexander disease masquerading as a mitochondrial disorder.
PubMed ID: 24742911
Sequence Information:
- Length: 432
- Mass: 49880
- Checksum: E6C3B3454C3F1250
- Sequence:
MERRRITSAA RRSYVSSGEM MVGGLAPGRR LGPGTRLSLA RMPPPLPTRV DFSLAGALNA GFKETRASER AEMMELNDRF ASYIEKVRFL EQQNKALAAE LNQLRAKEPT KLADVYQAEL RELRLRLDQL TANSARLEVE RDNLAQDLAT VRQKLQDETN LRLEAENNLA AYRQEADEAT LARLDLERKI ESLEEEIRFL RKIHEEEVRE LQEQLARQQV HVELDVAKPD LTAALKEIRT QYEAMASSNM HEAEEWYRSK FADLTDAAAR NAELLRQAKH EANDYRRQLQ SLTCDLESLR GTNESLERQM REQEERHVRE AASYQEALAR LEEEGQSLKD EMARHLQEYQ DLLNVKLALD IEIATYRKLL EGEENRITIP VQTFSNLQIR ETSLDTKSVS EGHLKRNIVV KTVEMRDGEV IKESKQEHKD VM
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.