Details for: PDE2A
Gene ID: 5138
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: PDE2A
Ensembl ID: ENSG00000186642
Description: phosphodiesterase 2A
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 14.86rCSI 36.1%PRS 81.03
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CSI 14.14rCSI 43.57%PRS 94.32
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CSI 11.97rCSI 37.42%PRS 84.19
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CSI 10.37rCSI 39.2%PRS 83.27
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CSI 6.43rCSI 37.86%PRS 83.56
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CSI 6.38rCSI 8.22%PRS 84.12
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CSI 5.76rCSI 15.34%PRS 83.03
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CSI 5.41rCSI 19.48%PRS 81.36
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CSI 5.09rCSI 10.56%PRS 91.99
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CSI 4.82rCSI 19.46%PRS 93.81
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CSI 3.9rCSI 4.85%PRS 81
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CSI 3.84rCSI 8.86%PRS 86.18
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CSI 3.69rCSI 5.63%PRS 94.28
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CSI 3.62rCSI 5.82%PRS 84.14
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CSI 3.39rCSI 6.71%PRS 94.91
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CSI 3.26rCSI 13.27%PRS 87.43
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CSI 2.99rCSI 5.02%PRS 83.19
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CSI 2.92rCSI 6.97%PRS 84.96
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CSI 2.83rCSI 4.51%PRS 94.98
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CSI 2.78rCSI 12.77%PRS 94.81
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CSI 2.78rCSI 4.81%PRS 89.24
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CSI 2.72rCSI 3.71%PRS 87.81
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CSI 2.71rCSI 14.82%PRS 89.81
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CSI 2.58rCSI 5.59%PRS 83.87
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CSI 2.53rCSI 3.02%PRS 83.18
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CSI 2.08rCSI 6.51%PRS 85.96
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CSI 2.01rCSI 6.74%PRS 82.14
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CSI 2rCSI 4.11%PRS 83.44
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CSI 1.88rCSI 44.95%PRS 80.93
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CSI 1.86rCSI 44.8%PRS 80.95
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CSI 1.49rCSI 4.88%PRS 83.78
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CSI 1.28rCSI 8.78%PRS 95.62
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CSI 1.22rCSI 2.15%PRS 82.49
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CSI 0.98rCSI 4.42%PRS 95.89
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CSI 0.78rCSI 4.45%PRS 95.45
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CSI 0.72rCSI 5.26%PRS 87.03
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 1345664382
Symbol: PDE2A_HUMAN
Name: Cyclic GMP-stimulated phosphodiesterase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9210593
Title: Isolation and characterization of human cDNAs encoding a cGMP-stimulated 3',5'-cyclic nucleotide phosphodiesterase.
PubMed ID: 9210593
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 19632989
Title: Dual acylation of PDE2A splice variant 3: targeting to synaptic membranes.
PubMed ID: 19632989
PubMed ID: 19369195
Title: Large-scale proteomics analysis of the human kinome.
PubMed ID: 19369195
PubMed ID: 20213681
Title: Strategy for comprehensive identification of human N-myristoylated proteins using an insect cell-free protein synthesis system.
PubMed ID: 20213681
PubMed ID: 24705027
Title: Role of phosphodiesterase 2 in growth and invasion of human malignant melanoma cells.
PubMed ID: 24705027
PubMed ID: 28463107
Title: PDE2A2 regulates mitochondria morphology and apoptotic cell death via local modulation of cAMP/PKA signalling.
PubMed ID: 28463107
DOI: 10.7554/elife.21374
PubMed ID: 29392776
Title: A homozygous loss-of-function mutation in PDE2A associated to early-onset hereditary chorea.
PubMed ID: 29392776
DOI: 10.1002/mds.27286
PubMed ID: 32467598
Title: Biallelic PDE2A variants: a new cause of syndromic paroxysmal dyskinesia.
PubMed ID: 32467598
PubMed ID: 32196122
Title: A homozygous splicing mutation in PDE2A in a family with atypical Rett syndrome.
PubMed ID: 32196122
DOI: 10.1002/mds.28023
PubMed ID: 15938621
Title: Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system.
PubMed ID: 15938621
DOI: 10.1021/bi047313h
PubMed ID: 19828435
Title: Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct.
PubMed ID: 19828435
PubMed ID: 23899287
Title: X-ray crystal structure of phosphodiesterase 2 in complex with a highly selective, nanomolar inhibitor reveals a binding-induced pocket important for selectivity.
PubMed ID: 23899287
DOI: 10.1021/ja404449g
Sequence Information:
- Length: 941
- Mass: 105717
- Checksum: 9797609B487FD64E
- Sequence:
MGQACGHSIL CRSQQYPAAR PAEPRGQQVF LKPDEPPPPP QPCADSLQDA LLSLGSVIDI SGLQRAVKEA LSAVLPRVET VYTYLLDGES QLVCEDPPHE LPQEGKVREA IISQKRLGCN GLGFSDLPGK PLARLVAPLA PDTQVLVMPL ADKEAGAVAA VILVHCGQLS DNEEWSLQAV EKHTLVALRR VQVLQQRGPR EAPRAVQNPP EGTAEDQKGG AAYTDRDRKI LQLCGELYDL DASSLQLKVL QYLQQETRAS RCCLLLVSED NLQLSCKVIG DKVLGEEVSF PLTGCLGQVV EDKKSIQLKD LTSEDVQQLQ SMLGCELQAM LCVPVISRAT DQVVALACAF NKLEGDLFTD EDEHVIQHCF HYTSTVLTST LAFQKEQKLK CECQALLQVA KNLFTHLDDV SVLLQEIITE ARNLSNAEIC SVFLLDQNEL VAKVFDGGVV DDESYEIRIP ADQGIAGHVA TTGQILNIPD AYAHPLFYRG VDDSTGFRTR NILCFPIKNE NQEVIGVAEL VNKINGPWFS KFDEDLATAF SIYCGISIAH SLLYKKVNEA QYRSHLANEM MMYHMKVSDD EYTKLLHDGI QPVAAIDSNF ASFTYTPRSL PEDDTSMAIL SMLQDMNFIN NYKIDCPTLA RFCLMVKKGY RDPPYHNWMH AFSVSHFCYL LYKNLELTNY LEDIEIFALF ISCMCHDLDH RGTNNSFQVA SKSVLAALYS SEGSVMERHH FAQAIAILNT HGCNIFDHFS RKDYQRMLDL MRDIILATDL AHHLRIFKDL QKMAEVGYDR NNKQHHRLLL CLLMTSCDLS DQTKGWKTTR KIAELIYKEF FSQGDLEKAM GNRPMEMMDR EKAYIPELQI SFMEHIAMPI YKLLQDLFPK AAELYERVAS NREHWTKVSH KFTIRGLPSN NSLDFLDEEY EVPDLDGTRA PINGCCSLDA E
Genular Protein ID: 4152252911
Symbol: Q8IW54_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 941
- Mass: 105649
- Checksum: 93028FC28CB54D6B
- Sequence:
MGQACGHSIL CRSQQYPAAR PAEPRGQQVF LKPDEPPPPP QQCADSLQDA LLSLGSVIDI SGLQRAVKEA LSAVLPRVET VYTYLLDGES QLVCEDPPHE LPQEGKVREA IISQKRLGCN GLGFSDLPGK PLARLVAPLA PDTQVLVMPL ADKEAGAVAA VILVHCGQLS DNEEWSLQAV EKHTLVALRR VQVLQQRGPR EAPRAVQNPP EGTAEDQKGG AAYTDRDRKI LQLCGELYDL DASSLQLKVL QYLQQETRAS RCCLLLVSED NLQLSCKVIG DKVLGEEVSF PLTGCLGQVV EDKKSIQLKD LTSEDVQQLQ SMLGCELQAM LCVPVISRAT DQVVALACAF NKLEGDLFTD EDEHVIQHCF HYTSTVLTST LAFQKEQKLK CECQALLQVA KNLFTHLDDV SVLLQEIITE ARNLSNAEIC SVFLLDQNEL VAKVFDGGVV DDESYEIRIP ADQGIAGHVA TTGQILNIPD AYAHPLFYRG VDDSTGFRTR NILCFPIKNE NQEVIGVAEL VNKINGPWFS KFDEDLATAF SIYCGISIAH SLLYKKVNEA QYRSHLANEM MMYHMKVSDD EYTKLLHDGI QPVAAIDSNF ASFTYTPRSL PEDDTSMAIL SMLQDMNFIN NYKIDCPTLA RFCLMVKKGY RDPPYHNWMH AFSVSHFCYL LYKNLELTNY LEDIEIFALF ISCMCHDLDH RGTNNSFQVA SKSVLAALYS SEGSVMERHH FAQAIAILNT HGCNIFDHFS RKDYQRMLDL MRDIILATDL AHHLRIFKDL QKMAEVGYDR NNKQHHRLLL CLLMTSCDLS DQTKGWKTTR KIAELIYKEF FSQGDLEKAM GNRPMEMMDR EKAYIPELQI SFMEHIAMPI YKLLQDLFPK AAELYERVAS NGEHWTKVSH KFTIRGIPSN NSLDFLDEEY EVPDLDGTRA PINGCCSLDA E