Details for: LHX3
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 7.6184
Cell Significance Index: -1.1900 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 4.6719
Cell Significance Index: -1.1900 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 4.3941
Cell Significance Index: 61.7200 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 1.7800
Cell Significance Index: 13.7200 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 0.9692
Cell Significance Index: -1.2000 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 0.8125
Cell Significance Index: 13.1600 - Cell Name: sensory neuron (CL0000101)
Fold Change: 0.5647
Cell Significance Index: 3.2100 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.4672
Cell Significance Index: 6.6900 - Cell Name: OFF-bipolar cell (CL0000750)
Fold Change: 0.3655
Cell Significance Index: 3.2200 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.2466
Cell Significance Index: 2.4400 - Cell Name: bipolar neuron (CL0000103)
Fold Change: 0.2319
Cell Significance Index: 1.3000 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.1358
Cell Significance Index: 1.8500 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: 0.1229
Cell Significance Index: 1.4900 - Cell Name: epithelial cell of lung (CL0000082)
Fold Change: 0.0771
Cell Significance Index: 0.7300 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: 0.0755
Cell Significance Index: 1.0600 - Cell Name: peripheral nervous system neuron (CL2000032)
Fold Change: 0.0630
Cell Significance Index: 0.4900 - Cell Name: diffuse bipolar 1 cell (CL4033027)
Fold Change: 0.0499
Cell Significance Index: 0.6100 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.0495
Cell Significance Index: 0.7100 - Cell Name: diffuse bipolar 3b cell (CL4033030)
Fold Change: 0.0295
Cell Significance Index: 0.3600 - Cell Name: flat midget bipolar cell (CL4033033)
Fold Change: 0.0225
Cell Significance Index: 0.2800 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0071
Cell Significance Index: 0.3300 - Cell Name: ganglion interneuron (CL0000397)
Fold Change: 0.0061
Cell Significance Index: 0.0500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0057
Cell Significance Index: 2.5400 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: 0.0008
Cell Significance Index: 0.0100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0002
Cell Significance Index: -0.4700 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0003
Cell Significance Index: -0.2500 - Cell Name: ependymal cell (CL0000065)
Fold Change: -0.0011
Cell Significance Index: -0.0100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0013
Cell Significance Index: -0.7100 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0017
Cell Significance Index: -0.6200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0017
Cell Significance Index: -0.7500 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0018
Cell Significance Index: -0.9600 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0021
Cell Significance Index: -0.2500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0031
Cell Significance Index: -0.6500 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0034
Cell Significance Index: -0.3900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0042
Cell Significance Index: -0.8400 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0043
Cell Significance Index: -0.7300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0052
Cell Significance Index: -1.0300 - Cell Name: acinar cell (CL0000622)
Fold Change: -0.0064
Cell Significance Index: -0.0800 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0073
Cell Significance Index: -0.4700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0077
Cell Significance Index: -1.0600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0087
Cell Significance Index: -0.4500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0100
Cell Significance Index: -0.5600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0121
Cell Significance Index: -0.6400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0127
Cell Significance Index: -0.3400 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.0152
Cell Significance Index: -0.3800 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0190
Cell Significance Index: -0.5200 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0197
Cell Significance Index: -0.9300 - Cell Name: diffuse bipolar 2 cell (CL4033028)
Fold Change: -0.0204
Cell Significance Index: -0.2500 - Cell Name: secretory cell (CL0000151)
Fold Change: -0.0216
Cell Significance Index: -0.1500 - Cell Name: ON-bipolar cell (CL0000749)
Fold Change: -0.0221
Cell Significance Index: -0.2500 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.0247
Cell Significance Index: -0.6300 - Cell Name: mesenchymal stem cell (CL0000134)
Fold Change: -0.0248
Cell Significance Index: -0.2400 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0253
Cell Significance Index: -0.7300 - Cell Name: retinal cone cell (CL0000573)
Fold Change: -0.0256
Cell Significance Index: -0.3200 - Cell Name: peg cell (CL4033014)
Fold Change: -0.0260
Cell Significance Index: -0.6000 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.0269
Cell Significance Index: -0.5300 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: -0.0270
Cell Significance Index: -0.3700 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: -0.0278
Cell Significance Index: -0.2300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0283
Cell Significance Index: -0.9000 - Cell Name: epithelial cell (CL0000066)
Fold Change: -0.0284
Cell Significance Index: -0.3000 - Cell Name: medium spiny neuron (CL1001474)
Fold Change: -0.0289
Cell Significance Index: -0.3900 - Cell Name: diffuse bipolar 6 cell (CL4033032)
Fold Change: -0.0294
Cell Significance Index: -0.3400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0301
Cell Significance Index: -0.8600 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.0329
Cell Significance Index: -0.8200 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.0346
Cell Significance Index: -0.7200 - Cell Name: mast cell (CL0000097)
Fold Change: -0.0350
Cell Significance Index: -0.4600 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: -0.0354
Cell Significance Index: -0.3700 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
Fold Change: -0.0356
Cell Significance Index: -0.7100 - Cell Name: precursor B cell (CL0000817)
Fold Change: -0.0371
Cell Significance Index: -0.4800 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.0373
Cell Significance Index: -0.5300 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.0374
Cell Significance Index: -0.7800 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.0380
Cell Significance Index: -0.8200 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: -0.0386
Cell Significance Index: -0.6600 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0396
Cell Significance Index: -1.0600 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.0402
Cell Significance Index: -0.8800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0411
Cell Significance Index: -0.8700 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0412
Cell Significance Index: -1.1000 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.0427
Cell Significance Index: -0.7400 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.0429
Cell Significance Index: -1.0400 - Cell Name: suprabasal keratinocyte (CL4033013)
Fold Change: -0.0435
Cell Significance Index: -0.7000 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.0438
Cell Significance Index: -0.8800 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: -0.0441
Cell Significance Index: -0.6700 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0446
Cell Significance Index: -0.7500 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0454
Cell Significance Index: -1.0900 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: -0.0454
Cell Significance Index: -0.6900 - Cell Name: neural cell (CL0002319)
Fold Change: -0.0463
Cell Significance Index: -0.5400 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.0465
Cell Significance Index: -0.9200 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: -0.0473
Cell Significance Index: -0.6000 - Cell Name: cytotoxic T cell (CL0000910)
Fold Change: -0.0473
Cell Significance Index: -0.6900 - Cell Name: neuron (CL0000540)
Fold Change: -0.0475
Cell Significance Index: -0.4500 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: -0.0497
Cell Significance Index: -0.4100 - Cell Name: OFFx cell (CL4033036)
Fold Change: -0.0502
Cell Significance Index: -0.5700 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: -0.0504
Cell Significance Index: -0.8300 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0505
Cell Significance Index: -0.8500 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.0506
Cell Significance Index: -0.7200 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: -0.0521
Cell Significance Index: -0.9000 - Cell Name: retina horizontal cell (CL0000745)
Fold Change: -0.0526
Cell Significance Index: -0.6600 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.0528
Cell Significance Index: -0.6300 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.0534
Cell Significance Index: -1.0500 - Cell Name: neural crest cell (CL0011012)
Fold Change: -0.0534
Cell Significance Index: -0.5800
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3172669007
Symbol: LHX3_HUMAN
Name: LIM/homeobox protein Lhx3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10598593
Title: Differential activation of pituitary hormone genes by human Lhx3 isoforms with distinct DNA binding properties.
PubMed ID: 10598593
PubMed ID: 15164053
Title: DNA sequence and analysis of human chromosome 9.
PubMed ID: 15164053
DOI: 10.1038/nature02465
PubMed ID: 15517599
Title: Serine/threonine/tyrosine phosphorylation of the LHX3 LIM-homeodomain transcription factor.
PubMed ID: 15517599
DOI: 10.1002/jcb.20287
PubMed ID: 21149718
Title: Model of pediatric pituitary hormone deficiency separates the endocrine and neural functions of the LHX3 transcription factor in vivo.
PubMed ID: 21149718
PubMed ID: 26612202
Title: Functional characterization of a human POU1F1 mutation associated with isolated growth hormone deficiency: a novel etiology for IGHD.
PubMed ID: 26612202
DOI: 10.1093/hmg/ddv486
PubMed ID: 10835633
Title: Mutations in LHX3 result in a new syndrome revealed by combined pituitary hormone deficiency.
PubMed ID: 10835633
DOI: 10.1038/76041
PubMed ID: 17327381
Title: Four novel mutations of the LHX3 gene cause combined pituitary hormone deficiencies with or without limited neck rotation.
PubMed ID: 17327381
DOI: 10.1210/jc.2006-2177
PubMed ID: 28302169
Title: Two novel LHX3 mutations in patients with combined pituitary hormone deficiency including cervical rigidity and sensorineural hearing loss.
PubMed ID: 28302169
Sequence Information:
- Length: 397
- Mass: 43358
- Checksum: FB4A2E48C015C249
- Sequence:
MLLETGLERD RARPGAAAVC TLGGTREIPL CAGCDQHILD RFILKALDRH WHSKCLKCSD CHTPLAERCF SRGESVYCKD DFFKRFGTKC AACQLGIPPT QVVRRAQDFV YHLHCFACVV CKRQLATGDE FYLMEDSRLV CKADYETAKQ REAEATAKRP RTTITAKQLE TLKSAYNTSP KPARHVREQL SSETGLDMRV VQVWFQNRRA KEKRLKKDAG RQRWGQYFRN MKRSRGGSKS DKDSVQEGQD SDAEVSFPDE PSLAEMGPAN GLYGSLGEPT QALGRPSGAL GNFSLEHGGL AGPEQYRELR PGSPYGVPPS PAAPQSLPGP QPLLSSLVYP DTSLGLVPSG APGGPPPMRV LAGNGPSSDL STGSSGGYPD FPASPASWLD EVDHAQF
Genular Protein ID: 314537252
Symbol: F1T0D9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 21697133
Title: Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method.
PubMed ID: 21697133
DOI: 10.1167/iovs.11-7479
Sequence Information:
- Length: 402
- Mass: 43978
- Checksum: 23B71558AC877672
- Sequence:
MEARGELGPA RESAGGDLLL ALLARRADLR REIPLCAGCD QHILDRFILK ALDRHWHSKC LKCSDCHTPL AERCFSRGES VYCKDDFFKR FGTKCAACQL GIPPTQVVRR AQDFVYHLHC FACVVCKRQL ATGDEFYLME DSRLVCKADY ETAKQREAEA TAKRPRTTIT AKQLETLKSA YNTSPKPARH VREQLSSETG LDMRVVQVWF QNRRAKEKRL KKDAGRQRWG QYFRNMKRSR GGSKSDKDSV QEGQDSDAEV SFPDEPSLAE MGPANGLYGS LGEPTQALGR PSGALGNFSL EHGGLAGPEQ YRELRPGSPY GVPPSPAAPQ SLPGPQPLLS SLVYPDTSLG LVPSGAPGGP PPMRVLAGNG PSSDLSTGSS GGYPDFPASP ASWLDEVDHA QF
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.