Details for: MMP12

Gene ID: 4321

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: MMP12

Ensembl ID: ENSG00000262406

Description: matrix metallopeptidase 12

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • extravillous trophoblast CL0008036
    CSI 3.51
    rCSI 4.34%
    PRS 99.71
  • colon macrophage CL0009038
    CSI 1.54
    rCSI 7.1%
    PRS 100

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

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  • Node Color (Target Cell CSI, relative to current network):
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    • High
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    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [MMP12](/details-gene/4321), or Matrix Metallopeptidase 12, is a protein-coding gene located on chromosome 11q22.2. It encodes macrophage metalloelastase, a zinc- and calcium-dependent endopeptidase critical for the breakdown of extracellular matrix (ECM) components, most notably elastin [Link](https://doi.org/10.1016/s0021-9258(20)80459-1). Its primary function involves tissue remodeling through the degradation of proteins like collagen and elastin [Link](https://doi.org/10.1074/jbc.272.18.12189). Expression data highlights its significant role in specialized cell types involved in tissue invasion and inflammation. **Overall**, [MMP12](/details-gene/4321) shows the highest significance in [extravillous trophoblast](/details-cell/CL0008036) and [colon macrophage](/details-cell/CL0009038), suggesting key functions in both placental development and mucosal immunity. Dysregulation of [MMP12](/details-gene/4321) has been associated with human disease, as indicated by its OMIM entry ([601046](https://omim.org/entry/601046)). ## Cellular Roles and Expression Landscape The expression profile of [MMP12](/details-gene/4321) points to highly specialized roles in cells that actively remodel their surrounding environment. **Overall**, the gene's significance is most pronounced in: * **[Extravillous trophoblast](/details-cell/CL0008036)** (CSI: 3.51): The exceptionally high significance in this cell type strongly suggests a critical role for [MMP12](/details-gene/4321) in embryonic development. [Extravillous trophoblast](/details-cell/CL0008036)s are responsible for invading the uterine wall to establish the placenta, a process that requires extensive, controlled degradation of the ECM. The potent elastolytic and collagenolytic activity of [MMP12](/details-gene/4321) is consistent with this invasive function. * **[Colon macrophage](/details-cell/CL0009038)** (CSI: 1.54): As its name "macrophage elastase" implies, [MMP12](/details-gene/4321) is a key effector molecule for macrophages. Its high significance in [colon macrophage](/details-cell/CL0009038)s indicates a role in mucosal immunity, inflammation, and tissue repair within the gastrointestinal tract. In this context, it may contribute to both physiological tissue turnover and pathological tissue destruction during inflammatory conditions. The specific enrichment in these two distinct cell lineages underscores the gene's central function in physiological and pathological processes requiring potent proteolytic activity and tissue remodeling. ## Pathways and Molecular Function The functional annotations for [MMP12](/details-gene/4321) align closely with its cellular expression pattern, centering on the modification of the extracellular environment and immune regulation. **Extracellular Matrix Remodeling:** The gene is a core component of pathways involved in ECM turnover, including '[Degradation of the extracellular matrix](/details-pathway/R-HSA-1474228)' ([R-HSA-1474228](https://reactome.org/content/detail/R-HSA-1474228)), '[Extracellular matrix organization](/details-pathway/R-HSA-1474244)' ([R-HSA-1474244](https://reactome.org/content/detail/R-HSA-1474244)), and '[Collagen degradation](/details-pathway/R-HSA-1442490)' ([R-HSA-1442490](https://reactome.org/content/detail/R-HSA-1442490)). Its molecular functions, such as '[metalloendopeptidase activity](/details-go/GO:0004222)' ([GO:0004222](https://www.ebi.ac.uk/QuickGO/term/GO:0004222)) and '[elastin catabolic process](/details-go/GO:0060309)' ([GO:0060309](https://www.ebi.ac.uk/QuickGO/term/GO:0060309)), directly enable the breakdown of structural proteins essential for tissue integrity. This is consistent with its roles in both trophoblast invasion and macrophage-mediated tissue clearance. **Development and Wound Healing:** [MMP12](/details-gene/4321) is implicated in developmental processes, such as '[bronchiole development](/details-go/GO:0060435)' ([GO:0060435](https://www.ebi.ac.uk/QuickGO/term/GO:0060435)) and '[lung alveolus development](/details-go/GO:0048286)' ([GO:0048286](https://www.ebi.ac.uk/QuickGO/term/GO:0048286)), as well as in wound repair, evidenced by its role in the '[positive regulation of epithelial cell proliferation involved in wound healing](/details-go/GO:0060054)' ([GO:0060054](https://www.ebi.ac.uk/QuickGO/term/GO:0060054)). **Immune Regulation:** Beyond its structural roles, [MMP12](/details-gene/4321) appears to have immunomodulatory functions. It is involved in regulating responses to viral infections ('[regulation of defense response to virus by host](/details-go/GO:0050691)' ([GO:0050691](https://www.ebi.ac.uk/QuickGO/term/GO:0050691))) and modulates interferon signaling pathways, both positively ([GO:0032727](https://www.ebi.ac.uk/QuickGO/term/GO:0032727)) and negatively ([GO:0060339](https://www.ebi.ac.uk/QuickGO/term/GO:0060339)). This suggests a dual capacity to either amplify or dampen specific immune cascades, a feature that could be highly relevant in the context of macrophage function. ## Research Directions The specific expression patterns and multifaceted functions of [MMP12](/details-gene/4321) suggest several avenues for future investigation, particularly concerning its role in development and chronic inflammatory diseases. **Testable Hypotheses:** 1. Given its profound significance in [extravillous trophoblast](/details-cell/CL0008036), [MMP12](/details-gene/4321) is likely indispensable for controlled uterine invasion during placentation. It can be hypothesized that insufficient [MMP12](/details-gene/4321) expression or activity contributes to pregnancy disorders characterized by shallow placental implantation, such as pre-eclampsia. 2. The high expression of [MMP12](/details-gene/4321) in [colon macrophage](/details-cell/CL0009038)s suggests it is a key driver of tissue damage in inflammatory bowel disease (IBD). It is hypothesized that excessive [MMP12](/details-gene/4321) activity in the gut mucosa leads to breakdown of the epithelial barrier, perpetuating chronic inflammation and ulceration. **Proposed Experimental Approach:** To test the second hypothesis regarding IBD, a robust preclinical study could be designed. Mice with a targeted deletion of the *Mmp12* gene (*Mmp12-/-*) and wild-type controls would be subjected to a chemically induced colitis model, such as dextran sodium sulfate (DSS) administration. Disease progression would be monitored by assessing weight loss, stool consistency, and intestinal bleeding. At the study endpoint, colon tissues would be collected for histological analysis of tissue damage, quantification of inflammatory cell infiltration via flow cytometry, and measurement of pro-inflammatory cytokine levels (e.g., TNF-α, IL-6) using ELISA or qRT-PCR. A significant reduction in disease severity in *Mmp12-/-* mice would provide strong evidence for its pathogenic role in IBD. **Therapeutic Potential:** As a secreted enzyme that actively degrades tissue, [MMP12](/details-gene/4321) represents a promising target for therapeutic **inhibition**. Its involvement in inflammatory conditions characterized by excessive tissue destruction (e.g., IBD, chronic obstructive pulmonary disease, atherosclerosis) makes it an attractive candidate for the development of specific small molecule inhibitors. A highly selective inhibitor could mitigate pathological remodeling while potentially sparing the functions of other MMPs, thereby reducing off-target effects and offering a targeted approach to treating chronic inflammatory diseases.

Genular Protein ID: 3864689789

Symbol: MMP12_HUMAN

Name: Macrophage metalloelastase

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8226919

Title: Cloning and characterization of a unique elastolytic metalloproteinase produced by human alveolar macrophages.

PubMed ID: 8226919

DOI: 10.1016/s0021-9258(20)80459-1

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9115292

Title: Hydrolysis of a broad spectrum of extracellular matrix proteins by human macrophage elastase.

PubMed ID: 9115292

DOI: 10.1074/jbc.272.18.12189

PubMed ID: 11575928

Title: Substrate specificity determinants of human macrophage elastase (MMP-12) based on the 1.1 A crystal structure.

PubMed ID: 11575928

DOI: 10.1006/jmbi.2001.4954

PubMed ID: 11575929

Title: Crystal structure of human macrophage elastase (MMP-12) in complex with a hydroxamic acid inhibitor.

PubMed ID: 11575929

DOI: 10.1006/jmbi.2001.4953

Sequence Information:

  • Length: 470
  • Mass: 54002
  • Checksum: 8C745EEA8C0EA216
  • Sequence:
  • MKFLLILLLQ ATASGALPLN SSTSLEKNNV LFGERYLEKF YGLEINKLPV TKMKYSGNLM 
    KEKIQEMQHF LGLKVTGQLD TSTLEMMHAP RCGVPDVHHF REMPGGPVWR KHYITYRINN 
    YTPDMNREDV DYAIRKAFQV WSNVTPLKFS KINTGMADIL VVFARGAHGD FHAFDGKGGI 
    LAHAFGPGSG IGGDAHFDED EFWTTHSGGT NLFLTAVHEI GHSLGLGHSS DPKAVMFPTY 
    KYVDINTFRL SADDIRGIQS LYGDPKENQR LPNPDNSEPA LCDPNLSFDA VTTVGNKIFF 
    FKDRFFWLKV SERPKTSVNL ISSLWPTLPS GIEAAYEIEA RNQVFLFKDD KYWLISNLRP 
    EPNYPKSIHS FGFPNFVKKI DAAVFNPRFY RTYFFVDNQY WRYDERRQMM DPGYPKLITK 
    NFQGIGPKID AVFYSKNKYY YFFQGSNQFE YDFLLQRITK TLKSNSWFGC