Details for: ITGA6
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 3.27
Marker Score: 1722 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 2.67
Marker Score: 23425 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: 2.62
Marker Score: 2322 - Cell Name: kidney collecting duct intercalated cell (CL1001432)
Fold Change: 2.51
Marker Score: 4160 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 2.5
Marker Score: 1494 - Cell Name: epithelial cell of urethra (CL1000296)
Fold Change: 2.44
Marker Score: 1921 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 2.19
Marker Score: 3220 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 2.18
Marker Score: 4969 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 2.12
Marker Score: 5170.5 - Cell Name: alveolar capillary type 1 endothelial cell (CL4028002)
Fold Change: 2.04
Marker Score: 5196 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 2.01
Marker Score: 42826 - Cell Name: colon epithelial cell (CL0011108)
Fold Change: 1.99
Marker Score: 6253 - Cell Name: mucous neck cell (CL0000651)
Fold Change: 1.98
Marker Score: 4502 - Cell Name: endothelial cell of uterus (CL0009095)
Fold Change: 1.95
Marker Score: 3888 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.94
Marker Score: 1128 - Cell Name: stem cell of epidermis (CL1000428)
Fold Change: 1.92
Marker Score: 650 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: 1.92
Marker Score: 1575 - Cell Name: enterocyte (CL0000584)
Fold Change: 1.76
Marker Score: 8426 - Cell Name: endothelial cell of vascular tree (CL0002139)
Fold Change: 1.74
Marker Score: 2526 - Cell Name: basal cell (CL0000646)
Fold Change: 1.73
Marker Score: 2239 - Cell Name: intestine goblet cell (CL0019031)
Fold Change: 1.7
Marker Score: 1629 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 1.69
Marker Score: 1780 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.66
Marker Score: 6529 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 1.64
Marker Score: 6870.5 - Cell Name: stem cell (CL0000034)
Fold Change: 1.63
Marker Score: 3878.5 - Cell Name: lung goblet cell (CL1000143)
Fold Change: 1.62
Marker Score: 467 - Cell Name: renal beta-intercalated cell (CL0002201)
Fold Change: 1.61
Marker Score: 509 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: 1.6
Marker Score: 384 - Cell Name: lung microvascular endothelial cell (CL2000016)
Fold Change: 1.58
Marker Score: 336 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: 1.57
Marker Score: 9998 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 1.56
Marker Score: 914 - Cell Name: epithelial cell of prostate (CL0002231)
Fold Change: 1.55
Marker Score: 1073 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 1.54
Marker Score: 382 - Cell Name: type EC enteroendocrine cell (CL0000577)
Fold Change: 1.53
Marker Score: 1439 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.52
Marker Score: 1727 - Cell Name: intestinal crypt stem cell (CL0002250)
Fold Change: 1.5
Marker Score: 563 - Cell Name: kidney collecting duct principal cell (CL1001431)
Fold Change: 1.48
Marker Score: 3743 - Cell Name: basal cell of epithelium of trachea (CL1000348)
Fold Change: 1.47
Marker Score: 10965 - Cell Name: endothelial cell (CL0000115)
Fold Change: 1.47
Marker Score: 1315 - Cell Name: mural cell (CL0008034)
Fold Change: 1.46
Marker Score: 167533 - Cell Name: early promyelocyte (CL0002154)
Fold Change: 1.46
Marker Score: 1166 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: 1.45
Marker Score: 5156 - Cell Name: renal intercalated cell (CL0005010)
Fold Change: 1.45
Marker Score: 771 - Cell Name: capillary endothelial cell (CL0002144)
Fold Change: 1.42
Marker Score: 1529 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 1.41
Marker Score: 2978 - Cell Name: vein endothelial cell (CL0002543)
Fold Change: 1.41
Marker Score: 1271 - Cell Name: paneth cell (CL0000510)
Fold Change: 1.35
Marker Score: 941 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.35
Marker Score: 1342 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 1.35
Marker Score: 3169 - Cell Name: Sertoli cell (CL0000216)
Fold Change: 1.34
Marker Score: 7953.5 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: 1.34
Marker Score: 625 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 1.33
Marker Score: 3573 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 1.3
Marker Score: 1633 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 1.3
Marker Score: 6373 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 1.27
Marker Score: 838 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 1.27
Marker Score: 634 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.27
Marker Score: 1401 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 1.24
Marker Score: 2523 - Cell Name: renal principal cell (CL0005009)
Fold Change: 1.23
Marker Score: 945 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 1.22
Marker Score: 2321 - Cell Name: male germ cell (CL0000015)
Fold Change: 1.2
Marker Score: 346 - Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
Fold Change: 1.2
Marker Score: 1268 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 1.19
Marker Score: 695 - Cell Name: pulmonary artery endothelial cell (CL1001568)
Fold Change: 1.17
Marker Score: 1006 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 1.16
Marker Score: 1005 - Cell Name: serous secreting cell (CL0000313)
Fold Change: 1.16
Marker Score: 463 - Cell Name: astrocyte (CL0000127)
Fold Change: 1.14
Marker Score: 992 - Cell Name: endothelial tip cell (CL0000704)
Fold Change: 1.14
Marker Score: 265 - Cell Name: peptic cell (CL0000155)
Fold Change: 1.1
Marker Score: 462 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 1.1
Marker Score: 344 - Cell Name: cell of skeletal muscle (CL0000188)
Fold Change: 1.1
Marker Score: 834.5 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 1.1
Marker Score: 473 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.09
Marker Score: 17110 - Cell Name: papillary tips cell (CL1000597)
Fold Change: 1.07
Marker Score: 215 - Cell Name: lung secretory cell (CL1000272)
Fold Change: 1.06
Marker Score: 949 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 1.06
Marker Score: 3910 - Cell Name: granulosa cell (CL0000501)
Fold Change: 1.05
Marker Score: 10615.5 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.04
Marker Score: 305 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 1.04
Marker Score: 251703 - Cell Name: prostate gland microvascular endothelial cell (CL2000059)
Fold Change: 1.02
Marker Score: 395 - Cell Name: P/D1 enteroendocrine cell (CL0002268)
Fold Change: 1
Marker Score: 374 - Cell Name: pulmonary ionocyte (CL0017000)
Fold Change: 1
Marker Score: 614 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71725 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47948 - Cell Name: medullary thymic epithelial cell (CL0002365)
Fold Change: 0.98
Marker Score: 1608.5 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30395 - Cell Name: endothelial cell of artery (CL1000413)
Fold Change: 0.97
Marker Score: 404 - Cell Name: oogonial cell (CL0000024)
Fold Change: 0.97
Marker Score: 1392 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.97
Marker Score: 33442 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 0.96
Marker Score: 275 - Cell Name: enteroendocrine cell (CL0000164)
Fold Change: 0.95
Marker Score: 493 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.95
Marker Score: 490 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2405 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.95
Marker Score: 447 - Cell Name: kidney cell (CL1000497)
Fold Change: 0.94
Marker Score: 625 - Cell Name: endothelial cell of lymphatic vessel (CL0002138)
Fold Change: 0.93
Marker Score: 583 - Cell Name: nephron tubule epithelial cell (CL1000494)
Fold Change: 0.93
Marker Score: 218 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.93
Marker Score: 1504 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.92
Marker Score: 5271 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.92
Marker Score: 955
Hover over a box to see details here...
Hover over a box to see details here...
Hover over a box to see details here...
Other Information
Genular Protein ID: 1788695242
Symbol: ITA6_HUMAN
Name: Integrin alpha-6
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1976638
Title: Epithelial integrin alpha 6 beta 4: complete primary structure of alpha 6 and variant forms of beta 4.
PubMed ID: 1976638
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2070796
Title: Molecular cloning of the human alpha 6 integrin subunit. Alternative splicing of alpha 6 mRNA and chromosomal localization of the alpha 6 and beta 4 genes.
PubMed ID: 2070796
PubMed ID: 1946438
Title: Cell type-specific integrin variants with alternative alpha chain cytoplasmic domains.
PubMed ID: 1946438
PubMed ID: 1476731
Title: An efficient and reliable method for cloning PCR-amplification products: a survey of point mutations in integrin cDNA.
PubMed ID: 1476731
PubMed ID: 8496190
Title: Inside-out integrin signaling in macrophages. Analysis of the role of the alpha 6A beta 1 and alpha 6B beta 1 integrin variants in laminin adhesion by cDNA expression in an alpha 6 integrin-deficient macrophage cell line.
PubMed ID: 8496190
PubMed ID: 8253814
Title: Alternative extracellular and cytoplasmic domains of the integrin alpha 7 subunit are differentially expressed during development.
PubMed ID: 8253814
PubMed ID: 7583007
Title: An alternatively spliced exon in the extracellular domain of the human alpha 6 integrin subunit -- functional analysis of the alpha 6 integrin variants.
PubMed ID: 7583007
PubMed ID: 2649503
Title: Association of the VLA alpha 6 subunit with a novel protein. A possible alternative to the common VLA beta 1 subunit on certain cell lines.
PubMed ID: 2649503
PubMed ID: 2542022
Title: A novel integrin (alpha E beta 4) from human epithelial cells suggests a fourth family of integrin adhesion receptors.
PubMed ID: 2542022
PubMed ID: 1953640
Title: Separation of important new platelet glycoproteins (GPIa, GPIc, GPIc*, GPIIa and GMP-140) by F.P.L.C. Characterization by monoclonal antibodies and gas-phase sequencing.
PubMed ID: 1953640
DOI: 10.1042/bj2790419
PubMed ID: 8360143
Title: The role of phosphorylation in activation of the alpha 6A beta 1 laminin receptor.
PubMed ID: 8360143
PubMed ID: 7681434
Title: Biochemical characterization and tissue distribution of the A and B variants of the integrin alpha 6 subunit.
PubMed ID: 7681434
PubMed ID: 9185503
Title: A homozygous mutation in the integrin alpha6 gene in junctional epidermolysis bullosa with pyloric atresia.
PubMed ID: 9185503
DOI: 10.1172/jci119474
PubMed ID: 11359780
Title: Identification of a novel structural variant of the alpha 6 integrin.
PubMed ID: 11359780
PubMed ID: 15023541
Title: Extracellular alpha 6 integrin cleavage by urokinase-type plasminogen activator in human prostate cancer.
PubMed ID: 15023541
PubMed ID: 15611341
Title: Palmitoylation supports assembly and function of integrin-tetraspanin complexes.
PubMed ID: 15611341
PubMed ID: 15466886
Title: alpha4beta1- and alpha6beta1-integrins are functional receptors for midkine, a heparin-binding growth factor.
PubMed ID: 15466886
DOI: 10.1242/jcs.01423
PubMed ID: 16754960
Title: Small GTPase Rab21 regulates cell adhesion and controls endosomal traffic of beta1-integrins.
PubMed ID: 16754960
PubMed ID: 16263699
Title: Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach.
PubMed ID: 16263699
PubMed ID: 19159218
Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
PubMed ID: 19159218
DOI: 10.1021/pr8008012
PubMed ID: 17303120
Title: Integrin alpha6 cleavage: a novel modification to modulate cell migration.
PubMed ID: 17303120
PubMed ID: 20682778
Title: Direct binding of the EGF-like domain of neuregulin-1 to integrins ({alpha}v{beta}3 and {alpha}6{beta}4) is involved in neuregulin-1/ErbB signaling.
PubMed ID: 20682778
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22314500
Title: Palmitoylation by DHHC3 is critical for the function, expression, and stability of integrin alpha6beta4.
PubMed ID: 22314500
PubMed ID: 22351760
Title: Cross-talk between integrin alpha6beta4 and insulin-like growth factor-1 receptor (IGF1R) through direct alpha6beta4 binding to IGF1 and subsequent alpha6beta4-IGF1-IGF1R ternary complex formation in anchorage-independent conditions.
PubMed ID: 22351760
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 27607025
Title: Compound heterozygosity for novel splice site mutations of ITGA6 in lethal junctional epidermolysis bullosa with pyloric atresia.
PubMed ID: 27607025
PubMed ID: 28873464
Title: Direct integrin binding to insulin-like growth factor-2 through the C-domain is required for insulin-like growth factor receptor type 1 (IGF1R) signaling.
PubMed ID: 28873464
Sequence Information:
- Length: 1130
- Mass: 126606
- Checksum: B53712888B7FE3B6
- Sequence:
MAAAGQLCLL YLSAGLLSRL GAAFNLDTRE DNVIRKYGDP GSLFGFSLAM HWQLQPEDKR LLLVGAPRAE ALPLQRANRT GGLYSCDITA RGPCTRIEFD NDADPTSESK EDQWMGVTVQ SQGPGGKVVT CAHRYEKRQH VNTKQESRDI FGRCYVLSQN LRIEDDMDGG DWSFCDGRLR GHEKFGSCQQ GVAATFTKDF HYIVFGAPGT YNWKGIVRVE QKNNTFFDMN IFEDGPYEVG GETEHDESLV PVPANSYLGL LFLTSVSYTD PDQFVYKTRP PREQPDTFPD VMMNSYLGFS LDSGKGIVSK DEITFVSGAP RANHSGAVVL LKRDMKSAHL LPEHIFDGEG LASSFGYDVA VVDLNKDGWQ DIVIGAPQYF DRDGEVGGAV YVYMNQQGRW NNVKPIRLNG TKDSMFGIAV KNIGDINQDG YPDIAVGAPY DDLGKVFIYH GSANGINTKP TQVLKGISPY FGYSIAGNMD LDRNSYPDVA VGSLSDSVTI FRSRPVINIQ KTITVTPNRI DLRQKTACGA PSGICLQVKS CFEYTANPAG YNPSISIVGT LEAEKERRKS GLSSRVQFRN QGSEPKYTQE LTLKRQKQKV CMEETLWLQD NIRDKLRPIP ITASVEIQEP SSRRRVNSLP EVLPILNSDE PKTAHIDVHF LKEGCGDDNV CNSNLKLEYK FCTREGNQDK FSYLPIQKGV PELVLKDQKD IALEITVTNS PSNPRNPTKD GDDAHEAKLI ATFPDTLTYS AYRELRAFPE KQLSCVANQN GSQADCELGN PFKRNSNVTF YLVLSTTEVT FDTPDLDINL KLETTSNQDN LAPITAKAKV VIELLLSVSG VAKPSQVYFG GTVVGEQAMK SEDEVGSLIE YEFRVINLGK PLTNLGTATL NIQWPKEISN GKWLLYLVKV ESKGLEKVTC EPQKEINSLN LTESHNSRKK REITEKQIDD NRKFSLFAER KYQTLNCSVN VNCVNIRCPL RGLDSKASLI LRSRLWNSTF LEEYSKLNYL DILMRAFIDV TAAAENIRLP NAGTQVRVTV FPSKTVAQYS GVPWWIILVA ILAGILMLAL LVFILWKCGF FKRSRYDDSV PRYHAVRIRK EEREIKDEKY IDNLEKKQWI TKWNENESYS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.