Details for: SYCP1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: germ cell (CL0000586)
Fold Change: 2.2832
Cell Significance Index: 17.2400 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 1.3365
Cell Significance Index: 15.1300 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 1.2245
Cell Significance Index: 29.6600 - Cell Name: adipocyte of breast (CL0002617)
Fold Change: 0.5829
Cell Significance Index: 7.3400 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.3464
Cell Significance Index: 4.9600 - Cell Name: basophil mast progenitor cell (CL0002028)
Fold Change: 0.2838
Cell Significance Index: 2.4000 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.2216
Cell Significance Index: 3.1800 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.1511
Cell Significance Index: 2.5900 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: 0.1355
Cell Significance Index: 1.7500 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 0.0909
Cell Significance Index: 1.1700 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 0.0610
Cell Significance Index: 0.9000 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.0466
Cell Significance Index: 1.0200 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.0420
Cell Significance Index: 1.1300 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.0392
Cell Significance Index: 1.0300 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0343
Cell Significance Index: 23.7400 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.0261
Cell Significance Index: 0.6500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0228
Cell Significance Index: 4.5300 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0101
Cell Significance Index: 2.0300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0054
Cell Significance Index: 10.1600 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0026
Cell Significance Index: 4.7400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0008
Cell Significance Index: 1.1500 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0007
Cell Significance Index: 1.1400 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0011
Cell Significance Index: -0.5800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0012
Cell Significance Index: -0.4500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0019
Cell Significance Index: -0.2800 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0021
Cell Significance Index: -1.3100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0031
Cell Significance Index: -1.4200 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0033
Cell Significance Index: -2.4300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0035
Cell Significance Index: -1.0000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0036
Cell Significance Index: -0.6200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0042
Cell Significance Index: -2.3600 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.0074
Cell Significance Index: -0.1900 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0074
Cell Significance Index: -0.1900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0088
Cell Significance Index: -1.5900 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0113
Cell Significance Index: -0.1900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0118
Cell Significance Index: -2.4800 - Cell Name: precursor B cell (CL0000817)
Fold Change: -0.0126
Cell Significance Index: -0.1600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0154
Cell Significance Index: -1.7600 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0155
Cell Significance Index: -0.9500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0158
Cell Significance Index: -1.6400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0165
Cell Significance Index: -0.7700 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0171
Cell Significance Index: -2.1000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0177
Cell Significance Index: -1.1900 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0189
Cell Significance Index: -1.1900 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0199
Cell Significance Index: -1.1200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0211
Cell Significance Index: -1.6200 - Cell Name: cytotoxic T cell (CL0000910)
Fold Change: -0.0220
Cell Significance Index: -0.3200 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: -0.0269
Cell Significance Index: -0.3900 - Cell Name: thymocyte (CL0000893)
Fold Change: -0.0277
Cell Significance Index: -0.3500 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0285
Cell Significance Index: -1.2600 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0307
Cell Significance Index: -0.6000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0308
Cell Significance Index: -0.9800 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0313
Cell Significance Index: -1.4700 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.0320
Cell Significance Index: -0.4600 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: -0.0326
Cell Significance Index: -0.3100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0339
Cell Significance Index: -1.7600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0341
Cell Significance Index: -1.2900 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.0344
Cell Significance Index: -0.7400 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0354
Cell Significance Index: -0.9900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0360
Cell Significance Index: -1.1800 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0377
Cell Significance Index: -1.3200 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0380
Cell Significance Index: -1.9800 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.0389
Cell Significance Index: -0.7800 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.0406
Cell Significance Index: -0.6000 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0424
Cell Significance Index: -0.9000 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.0437
Cell Significance Index: -0.8900 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0467
Cell Significance Index: -1.2500 - Cell Name: mesangial cell (CL0000650)
Fold Change: -0.0498
Cell Significance Index: -0.6300 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.0517
Cell Significance Index: -1.2900 - Cell Name: OFF-bipolar cell (CL0000750)
Fold Change: -0.0539
Cell Significance Index: -0.4800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0555
Cell Significance Index: -1.9500 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0583
Cell Significance Index: -1.6800 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.0588
Cell Significance Index: -1.2300 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.0591
Cell Significance Index: -2.1700 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.0592
Cell Significance Index: -1.2800 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.0594
Cell Significance Index: -1.8800 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.0599
Cell Significance Index: -1.5300 - Cell Name: neural cell (CL0002319)
Fold Change: -0.0609
Cell Significance Index: -0.7100 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.0630
Cell Significance Index: -1.2500 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.0639
Cell Significance Index: -1.5600 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: -0.0679
Cell Significance Index: -0.8600 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0690
Cell Significance Index: -1.9700 - Cell Name: slow muscle cell (CL0000189)
Fold Change: -0.0695
Cell Significance Index: -1.0400 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.0700
Cell Significance Index: -1.4600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0700
Cell Significance Index: -1.8700 - Cell Name: medium spiny neuron (CL1001474)
Fold Change: -0.0700
Cell Significance Index: -0.9500 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0709
Cell Significance Index: -1.7000 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: -0.0711
Cell Significance Index: -0.9300 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: -0.0727
Cell Significance Index: -0.9800 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.0737
Cell Significance Index: -1.2700 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.0752
Cell Significance Index: -1.4700 - Cell Name: promonocyte (CL0000559)
Fold Change: -0.0754
Cell Significance Index: -0.8100 - Cell Name: neuron (CL0000540)
Fold Change: -0.0760
Cell Significance Index: -0.7200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.0765
Cell Significance Index: -2.6600 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.0782
Cell Significance Index: -1.5400 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: -0.0803
Cell Significance Index: -1.0300 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.0806
Cell Significance Index: -1.1300 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: -0.0818
Cell Significance Index: -1.0900 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: -0.0823
Cell Significance Index: -0.9200 - Cell Name: common lymphoid progenitor (CL0000051)
Fold Change: -0.0827
Cell Significance Index: -0.8400
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2421957882
Symbol: SYCP1_HUMAN
Name: Cancer/testis antigen 8
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9119375
Title: Human synaptonemal complex protein 1 (SCP1): isolation and characterization of the cDNA and chromosomal localization of the gene.
PubMed ID: 9119375
PubMed ID: 9371398
Title: Assignment of synaptonemal complex protein 1 (SCP1) to human chromosome 1p13 by fluorescence in situ hybridization and its expression in the testis.
PubMed ID: 9371398
DOI: 10.1159/000134637
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 26323297
Title: X-ray crystallographic studies of the middle part of the human synaptonemal complex protein 1 coiled-coil domain.
PubMed ID: 26323297
PubMed ID: 29915389
Title: Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
PubMed ID: 29915389
Sequence Information:
- Length: 976
- Mass: 114192
- Checksum: 43058F1A4B7F57E5
- Sequence:
MEKQKPFALF VPPRSSSSQV SAVKPQTLGG DSTFFKSFNK CTEDDFEFPF AKTNLSKNGE NIDSDPALQK VNFLPVLEQV GNSDCHYQEG LKDSDLENSE GLSRVYSKLY KEAEKIKKWK VSTEAELRQK ESKLQENRKI IEAQRKAIQE LQFGNEKVSL KLEEGIQENK DLIKENNATR HLCNLLKETC ARSAEKTKKY EYEREETRQV YMDLNNNIEK MITAFEELRV QAENSRLEMH FKLKEDYEKI QHLEQEYKKE INDKEKQVSL LLIQITEKEN KMKDLTFLLE ESRDKVNQLE EKTKLQSENL KQSIEKQHHL TKELEDIKVS LQRSVSTQKA LEEDLQIATK TICQLTEEKE TQMEESNKAR AAHSFVVTEF ETTVCSLEEL LRTEQQRLEK NEDQLKILTM ELQKKSSELE EMTKLTNNKE VELEELKKVL GEKETLLYEN KQFEKIAEEL KGTEQELIGL LQAREKEVHD LEIQLTAITT SEQYYSKEVK DLKTELENEK LKNTELTSHC NKLSLENKEL TQETSDMTLE LKNQQEDINN NKKQEERMLK QIENLQETET QLRNELEYVR EELKQKRDEV KCKLDKSEEN CNNLRKQVEN KNKYIEELQQ ENKALKKKGT AESKQLNVYE IKVNKLELEL ESAKQKFGEI TDTYQKEIED KKISEENLLE EVEKAKVIAD EAVKLQKEID KRCQHKIAEM VALMEKHKHQ YDKIIEERDS ELGLYKSKEQ EQSSLRASLE IELSNLKAEL LSVKKQLEIE REEKEKLKRE AKENTATLKE KKDKKTQTFL LETPEIYWKL DSKAVPSQTV SRNFTSVDHG ISKDKRDYLW TSAKNTLSTP LPKAYTVKTP TKPKLQQREN LNIPIEESKK KRKMAFEFDI NSDSSETTDL LSMVSEEETL KTLYRNNNPP ASHLCVKTPK KAPSSLTTPG STLKFGAIRK MREDRWAVIA KMDRKKKLKE AEKLFV
Genular Protein ID: 1449679833
Symbol: A0A087WZC3_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
Sequence Information:
- Length: 951
- Mass: 111240
- Checksum: 6938803661CA3140
- Sequence:
MEKQKPFALF VPPRSSSSQV SAVKPQTLGG DSTFFKSFNK CTEDDFEFPF AKTNLSKNGE NIDSDPALQK VNFLPVLEQV GNSDCHYQEG LKDSDLENSE GLSRVYSKLY KEAEKIKKWK VSTEAELRQK ESKLQENRKI IEAQRKAIQE LQFGNEKVSL KLEEGIQENK DLIKENNATR HLCNLLKETC ARSAEKTKKY EYEREETRQV YMDLNNNIEK MITAFEELRV QAENSRLEMH FKLKEDYEKI QHLEQEYKKE INDKEKQVSL LLIQITEKEN KMKDLTFLLE ESRDKVNQLE EKTKLQSENL KQSIEKQHHL TKELEDIKVS LQRSVSTQKA LEEDLQIATK TICQLTEEKE TQMEESNKAR AAHSFVVTEF ETTVCSLEEL LRTEQQRLEK NEDQLKILTM ELQKKSSELE EMTKLTNNKE VELEELKKVL GEKETLLYEN KQFEKIAEEL KGTEQELIGL LQAREKEVHD LEIQLTAITT SEQYYSKEVK DLKTELENEK LKNTELTSHC NKLSLENKEL TQETSDMTLE LKNQQEDINN NKKQEERMLK QIENLQETET QLRNELEYVR EELKQKRDEV KCKLDKSEEN CNNLRKQVEN KNKYIEELQQ ENKALKKKGT AESKQLNVYE IKVNKLELEL ESAKQKFGEI TDTYQKEIED KKISEENLLE EVEKAKVIAD EAVKLQKEID KRCQHKIAEM VALMEKHKHQ YDKIIEERDS ELGLYKSKEQ EQSSLRASLE KLKREAKENT ATLKEKKDKK TQTFLLETPE IYWKLDSKAV PSQTVSRNFT SVDHGISKDK RDYLWTSAKN TLSTPLPKAY TVKTPTKPKL QQRENLNIPI EESKKKRKMA FEFDINSDSS ETTDLLSMVS EEETLKTLYR NNNPPASHLC VKTPKKAPSS LTTPGSTLKF GAIRKMREDR WAVIAKMDRK KKLKEAEKLF V
Genular Protein ID: 2803926309
Symbol: B7ZLS9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 976
- Mass: 114199
- Checksum: 6F0D161B65238677
- Sequence:
MEKQKPFALF VPPRSSSSQV SAVKPQTLGG DSTFFKSFNK CTEDDFEFPF AKTNLSKNGE NIDSDPALQK VNFLPVFEQV GNSDCHYQEG LKDSDLENSE GLSRVYSKLY KEAEKIKKWK VSTEAELRQK ESKLQENRKI IEAQRKAIQE LQFGNEKVSL KLEEGIQENK DLIKENNATR HLCNLLKETC ARSAEKTKKY EYEREETRQV YMDLNSNIEK MITAFEELRV QAENSRLEMH FKLKEDYEKI QHLEQEYKKE INDKEKQVSL LLIQITEKEN KMKDLTFLLE ESRDKVNQLE EKTKLQSENL KQSIEKQHHL TKELEDIKVS LQRSVSTQKA LEEDLQIATK TICQLTEEKE TQMEESNKAR AAHSFVVTEF ETTVCSLEEL LRTEQQRLEK NEDQLKILTM ELQKKSSELE EMTKLTNNKE VELEELKKVL GEKETLLYEN KQFEKIAEEL KGTEQELIGL LQAREKEVHD LEIQLTAITT SEQYYSKEVK DLKTELENEK LKNTELTSHC NKLSLENKEL TQETSDMTLE LKNQQEDINN NKKQEERMLK QIENLQETET QLRNELEYVR EELKQKRDEV KCKLDKSEEN CNNLRKQVEN KNKYIEELQQ ENKALKKKGT AESKQLNVYE IKVNKLELEL ESAKQKFGEI TDTYQKEIED KKISEENLLE EVEKAKVIAD EAVKLQKEID KRCQHKIAEM VALMEKHKHQ YDKIIEERDS ELGLYKSKEQ EQSSLRASLE IELSNLKAEL LSVKKQLEIE REEKEKLKRE AKENTATLKE KKDKKTQTFL LETPEIYWKL DSKAVPSQTV SRNFTSVDHG ISKDKRDYLW TSAKNTLSTP LPKAYTVKTP TKPKLQQREN LNIPIEESKK KRKMAFEFDI NSDSSETTDL LSMVSEEETL KTLYRNNNPP ASHLCVKTPK KAPSSLTTPG STLKFGAIRK MREDRWAVIA KMDRKKKLKE AEKLFV
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.