Details for: NPHS2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: embryonic stem cell (CL0002322)
Fold Change: 5.3648
Cell Significance Index: -2.2100 - Cell Name: kidney cell (CL1000497)
Fold Change: 5.3518
Cell Significance Index: 42.7300 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 2.1237
Cell Significance Index: 18.0500 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 1.6968
Cell Significance Index: 41.1000 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 1.6292
Cell Significance Index: 27.8500 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 1.0195
Cell Significance Index: 52.9600 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.7759
Cell Significance Index: 47.5700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.6157
Cell Significance Index: 19.7200 - Cell Name: club cell (CL0000158)
Fold Change: 0.5516
Cell Significance Index: 6.0100 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 0.4022
Cell Significance Index: 4.5000 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.3366
Cell Significance Index: 8.8500 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.3191
Cell Significance Index: 6.6200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.3052
Cell Significance Index: 4.3700 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.2991
Cell Significance Index: 13.5600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2600
Cell Significance Index: 49.4800 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.2391
Cell Significance Index: 8.3100 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.2280
Cell Significance Index: 6.5700 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.1338
Cell Significance Index: 8.0300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.1146
Cell Significance Index: 2.4400 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.1114
Cell Significance Index: 11.0200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.1066
Cell Significance Index: 96.2400 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.1018
Cell Significance Index: 11.0800 - Cell Name: podocyte (CL0000653)
Fold Change: 0.0798
Cell Significance Index: 0.9200 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.0728
Cell Significance Index: 0.6700 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0642
Cell Significance Index: 11.5700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.0624
Cell Significance Index: 10.1500 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.0471
Cell Significance Index: 3.2600 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.0234
Cell Significance Index: 0.3400 - Cell Name: mesenchymal stem cell (CL0000134)
Fold Change: 0.0227
Cell Significance Index: 0.2200 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.0205
Cell Significance Index: 0.5100 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 0.0193
Cell Significance Index: 0.6100 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.0161
Cell Significance Index: 0.1900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0126
Cell Significance Index: 8.7000 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 0.0097
Cell Significance Index: 0.1300 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0091
Cell Significance Index: 0.3200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0081
Cell Significance Index: 1.0000 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.0051
Cell Significance Index: 0.0700 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0023
Cell Significance Index: 0.0600 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: 0.0020
Cell Significance Index: 0.0300 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.0015
Cell Significance Index: 0.0200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0014
Cell Significance Index: 2.6000 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0012
Cell Significance Index: 1.6800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0011
Cell Significance Index: 1.6700 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0002
Cell Significance Index: 0.4600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0005
Cell Significance Index: -0.1000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.0008
Cell Significance Index: -0.0200 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0014
Cell Significance Index: -0.2800 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0020
Cell Significance Index: -1.1100 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0029
Cell Significance Index: -1.8500 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0030
Cell Significance Index: -2.2100 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0030
Cell Significance Index: -2.2200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0031
Cell Significance Index: -1.4200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0037
Cell Significance Index: -0.0800 - Cell Name: pro-B cell (CL0000826)
Fold Change: -0.0037
Cell Significance Index: -0.0400 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0038
Cell Significance Index: -2.1500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0039
Cell Significance Index: -1.3900 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0058
Cell Significance Index: -1.6600 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0080
Cell Significance Index: -1.1600 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0082
Cell Significance Index: -1.4000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0082
Cell Significance Index: -1.1300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0088
Cell Significance Index: -0.2500 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: -0.0099
Cell Significance Index: -0.1200 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0107
Cell Significance Index: -2.2500 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: -0.0107
Cell Significance Index: -0.0700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0125
Cell Significance Index: -1.3000 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0139
Cell Significance Index: -0.5700 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0144
Cell Significance Index: -0.7300 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0157
Cell Significance Index: -1.6000 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0164
Cell Significance Index: -1.9100 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0184
Cell Significance Index: -0.3600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0185
Cell Significance Index: -2.1200 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: -0.0192
Cell Significance Index: -0.2900 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0194
Cell Significance Index: -0.5200 - Cell Name: CD4-positive, alpha-beta memory T cell (CL0000897)
Fold Change: -0.0229
Cell Significance Index: -0.2200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0240
Cell Significance Index: -1.0600 - Cell Name: differentiation-committed oligodendrocyte precursor (CL4023059)
Fold Change: -0.0240
Cell Significance Index: -0.2800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0249
Cell Significance Index: -1.5300 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: -0.0249
Cell Significance Index: -0.1300 - Cell Name: uterine smooth muscle cell (CL0002601)
Fold Change: -0.0272
Cell Significance Index: -0.2600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0276
Cell Significance Index: -1.5500 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.0291
Cell Significance Index: -0.7100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0293
Cell Significance Index: -1.1100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0305
Cell Significance Index: -0.5100 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0308
Cell Significance Index: -1.0800 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.0316
Cell Significance Index: -0.4500 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: -0.0325
Cell Significance Index: -0.3400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0326
Cell Significance Index: -2.2000 - Cell Name: fast muscle cell (CL0000190)
Fold Change: -0.0326
Cell Significance Index: -0.4300 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: -0.0329
Cell Significance Index: -0.3400 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.0340
Cell Significance Index: -1.0000 - Cell Name: stromal cell of endometrium (CL0002255)
Fold Change: -0.0344
Cell Significance Index: -0.4900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0345
Cell Significance Index: -1.1000 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0345
Cell Significance Index: -1.1300 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0355
Cell Significance Index: -0.9500 - Cell Name: skin fibroblast (CL0002620)
Fold Change: -0.0356
Cell Significance Index: -0.0800 - Cell Name: adipocyte of breast (CL0002617)
Fold Change: -0.0357
Cell Significance Index: -0.4500 - Cell Name: respiratory basal cell (CL0002633)
Fold Change: -0.0396
Cell Significance Index: -0.3900 - Cell Name: P/D1 enteroendocrine cell (CL0002268)
Fold Change: -0.0402
Cell Significance Index: -0.4500 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0410
Cell Significance Index: -0.5600 - Cell Name: decidual natural killer cell, human (CL0002343)
Fold Change: -0.0445
Cell Significance Index: -0.4600
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1846799072
Symbol: PODO_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10742096
Title: NPHS2, encoding the glomerular protein podocin, is mutated in autosomal recessive steroid-resistant nephrotic syndrome.
PubMed ID: 10742096
DOI: 10.1038/74166
PubMed ID: 10802674
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11562357
Title: Interaction with podocin facilitates nephrin signaling.
PubMed ID: 11562357
PubMed ID: 23648087
Title: Characterization of a short isoform of the kidney protein podocin in human kidney.
PubMed ID: 23648087
PubMed ID: 12464671
Title: NPHS2 mutations in late-onset focal segmental glomerulosclerosis: R229Q is a common disease-associated allele.
PubMed ID: 12464671
DOI: 10.1172/jci16242
PubMed ID: 12687458
Title: NPHS2 mutations in sporadic steroid-resistant nephrotic syndrome in Japanese children.
PubMed ID: 12687458
PubMed ID: 15253708
Title: NPHS2 mutation analysis shows genetic heterogeneity of steroid-resistant nephrotic syndrome and low post-transplant recurrence.
PubMed ID: 15253708
PubMed ID: 15954915
Title: Identification of podocin (NPHS2) gene mutations in African Americans with nondiabetic end-stage renal disease.
PubMed ID: 15954915
PubMed ID: 17899208
Title: NPHS2 (podicin) mutations in Turkish children with idiopathic nephrotic syndrome.
PubMed ID: 17899208
PubMed ID: 20798252
Title: Immunosuppression and renal outcome in congenital and pediatric steroid-resistant nephrotic syndrome.
PubMed ID: 20798252
DOI: 10.2215/cjn.01190210
PubMed ID: 21722858
Title: Disruption of PTPRO causes childhood-onset nephrotic syndrome.
PubMed ID: 21722858
PubMed ID: 20947785
Title: Clinical value of NPHS2 analysis in early- and adult-onset steroid-resistant nephrotic syndrome.
PubMed ID: 20947785
DOI: 10.2215/cjn.03770410
PubMed ID: 22578956
Title: Mutational analysis of the NPHS2 gene in Czech patients with idiopathic nephrotic syndrome.
PubMed ID: 22578956
PubMed ID: 22565185
Title: A spectrum of novel NPHS1 and NPHS2 gene mutations in pediatric nephrotic syndrome patients from Pakistan.
PubMed ID: 22565185
PubMed ID: 23913389
Title: Mutations in NPHS2 (podocin) in Mexican children with nephrotic syndrome who respond to standard steroid treatment.
PubMed ID: 23913389
PubMed ID: 24072147
Title: NPHS2 gene in steroid-resistant nephrotic syndrome: prevalence, clinical course, and mutational spectrum in South-West Iranian children.
PubMed ID: 24072147
PubMed ID: 23595123
Title: A molecular genetic analysis of childhood nephrotic syndrome in a cohort of Saudi Arabian families.
PubMed ID: 23595123
DOI: 10.1038/jhg.2013.27
PubMed ID: 23242530
Title: NPHS2 p.V290M mutation in late-onset steroid-resistant nephrotic syndrome.
PubMed ID: 23242530
PubMed ID: 23800802
Title: NPHS2 homozygous p.R229Q variant: potential modifier instead of causal effect in focal segmental glomerulosclerosis.
PubMed ID: 23800802
PubMed ID: 24227627
Title: NPHS2 mutations in steroid-resistant nephrotic syndrome: a mutation update and the associated phenotypic spectrum.
PubMed ID: 24227627
DOI: 10.1002/humu.22485
PubMed ID: 24509478
Title: Mutation-dependent recessive inheritance of NPHS2-associated steroid-resistant nephrotic syndrome.
PubMed ID: 24509478
DOI: 10.1038/ng.2898
PubMed ID: 26420286
Title: NPHS2 mutations account for only 15% of nephrotic syndrome cases.
PubMed ID: 26420286
PubMed ID: 27004616
Title: Expansion of phenotype and genotypic data in CRB2-related syndrome.
PubMed ID: 27004616
DOI: 10.1038/ejhg.2016.24
Sequence Information:
- Length: 383
- Mass: 42201
- Checksum: BBB57783C840F752
- Sequence:
MERRARSSSR ESRGRGGRTP HKENKRAKAE RSGGGRGRQE AGPEPSGSGR AGTPGEPRAP AATVVDVDEV RGSGEEGTEV VALLESERPE EGTKSSGLGA CEWLLVLISL LFIIMTFPFS IWFCVKVVQE YERVIIFRLG HLLPGRAKGP GLFFFLPCLD TYHKVDLRLQ TLEIPFHEIV TKDMFIMEID AICYYRMENA SLLLSSLAHV SKAVQFLVQT TMKRLLAHRS LTEILLERKS IAQDAKVALD SVTCIWGIKV ERIEIKDVRL PAGLQHSLAV EAEAQRQAKV RMIAAEAEKA ASESLRMAAE ILSGTPAAVQ LRYLHTLQSL STEKPSTVVL PLPFDLLNCL SSPSNRTQGS LPFPSPSKPV EPLNPKKKDS PML
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.