Details for: FGG
Gene ID: 2266
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: FGG
Ensembl ID: ENSG00000171557
Description: fibrinogen gamma chain
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
-
CSI 29.66rCSI 53.09%PRS 87.54
-
CSI 22.48rCSI 58.65%PRS 84.97
-
CSI 17.36rCSI 40.75%PRS 86.73
-
CSI 15.41rCSI 59.94%PRS 86.03
-
CSI 10.6rCSI 25.44%PRS 89.24
-
CSI 4.74rCSI 10.84%PRS 89.52
-
CSI 4.38rCSI 26.23%PRS 88.46
-
CSI 4.2rCSI 15.75%PRS 83.31
-
CSI 3.89rCSI 17.84%PRS 90.86
-
CSI 3.87rCSI 8.79%PRS 87.54
-
CSI 3.01rCSI 3.85%PRS 92.82
-
CSI 2.67rCSI 3.55%PRS 91.85
-
CSI 2.02rCSI 2.11%PRS 86.23
-
CSI 1.9rCSI 5.86%PRS 90.93
-
CSI 1.8rCSI 3.25%PRS 90.39
-
CSI 1.15rCSI 1.85%PRS 85.71
-
CSI 0.95rCSI 1.85%PRS 90.27
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
-
Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 84210600
Symbol: FIBG_HUMAN
Name: Fibrinogen gamma chain
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 6688357
Title: Characterization of a complementary deoxyribonucleic acid coding for the gamma chain of human fibrinogen.
PubMed ID: 6688357
DOI: 10.1021/bi00282a033
PubMed ID: 2990550
Title: Nucleotide sequence of the gene for the gamma chain of human fibrinogen.
PubMed ID: 2990550
DOI: 10.1021/bi00329a041
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8509453
Title: Evidence for the selective association of a subpopulation of GPIIb-IIIa with the actin cytoskeletons of thrombin-activated platelets.
PubMed ID: 8509453
PubMed ID: 1685103
Title: Polymorphism of the human gamma chain fibrinogen gene.
PubMed ID: 1685103
PubMed ID: 6689067
Title: Isolation and characterisation of cDNA clones for the A alpha- and gamma-chains of human fibrinogen.
PubMed ID: 6689067
PubMed ID: 6092346
Title: Structure of the human gamma-fibrinogen gene. Alternate mRNA splicing near the 3' end of the gene produces gamma A and gamma B forms of gamma-fibrinogen.
PubMed ID: 6092346
PubMed ID: 7654933
Title: Abnormal polymerization and normal binding of plasminogen and t-PA in three new dysfibrinogenaemias: Barcelona III and IV (gamma Arg 275-->His) and Villajoyosa (gamma Arg 275-->Cys).
PubMed ID: 7654933
PubMed ID: 7306501
Title: Carboxy-terminal amino acid sequence of a human fibrinogen gamma-chain variant (gamma').
PubMed ID: 7306501
DOI: 10.1021/bi00524a036
PubMed ID: 6575689
PubMed ID: 936108
Title: Disulfide bridges in NH2-terminal part of human fibrinogen.
PubMed ID: 936108
PubMed ID: 6860649
Title: Dimeric half-molecules of human fibrinogen are joined through disulfide bonds in an antiparallel orientation.
PubMed ID: 6860649
DOI: 10.1021/bi00278a003
PubMed ID: 1892842
Title: Recombinant human fibrinogen and sulfation of the gamma' chain.
PubMed ID: 1892842
DOI: 10.1021/bi00103a004
PubMed ID: 11307817
Title: The amino acid sequence in fibrin responsible for high affinity thrombin binding.
PubMed ID: 11307817
PubMed ID: 6383194
PubMed ID: 6592597
Title: Localization of a fibrin gamma-chain polymerization site within segment Thr-374 to Glu-396 of human fibrinogen.
PubMed ID: 6592597
PubMed ID: 6451630
Title: Localization of a fibrin polymerization site.
PubMed ID: 6451630
PubMed ID: 6326808
Title: Platelet receptor recognition site on human fibrinogen. Synthesis and structure-function relationship of peptides corresponding to the carboxy-terminal segment of the gamma chain.
PubMed ID: 6326808
DOI: 10.1021/bi00303a028
PubMed ID: 6325435
Title: Evidence that three adhesive proteins interact with a common recognition site on activated platelets.
PubMed ID: 6325435
PubMed ID: 3160702
Title: Localization of a fibrinogen calcium binding site between gamma-subunit positions 311 and 336 by terbium fluorescence.
PubMed ID: 3160702
PubMed ID: 6933547
Title: Human plasma fibrinogen heterogeneity: evidence for an extended carboxyl-terminal sequence in a normal gamma chain variant (gamma').
PubMed ID: 6933547
PubMed ID: 14760718
Title: Screening for N-glycosylated proteins by liquid chromatography mass spectrometry.
PubMed ID: 14760718
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 16263699
Title: Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach.
PubMed ID: 16263699
PubMed ID: 18780401
Title: Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry.
PubMed ID: 18780401
PubMed ID: 19159218
Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
PubMed ID: 19159218
DOI: 10.1021/pr8008012
PubMed ID: 19139490
Title: A strategy for precise and large scale identification of core fucosylated glycoproteins.
PubMed ID: 19139490
PubMed ID: 2143188
Title: A unique proteolytic fragment of human fibrinogen containing the A alpha COOH-terminal domain of the native molecule.
PubMed ID: 2143188
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26091039
Title: A single kinase generates the majority of the secreted phosphoproteome.
PubMed ID: 26091039
PubMed ID: 9016719
Title: Crystal structure of a 30 kDa C-terminal fragment from the gamma chain of human fibrinogen.
PubMed ID: 9016719
PubMed ID: 9207064
Title: The primary fibrin polymerization pocket: three-dimensional structure of a 30-kDa C-terminal gamma chain fragment complexed with the peptide Gly-Pro-Arg-Pro.
PubMed ID: 9207064
PubMed ID: 9333233
Title: Crystal structures of fragment D from human fibrinogen and its crosslinked counterpart from fibrin.
PubMed ID: 9333233
DOI: 10.1038/38947
PubMed ID: 9628725
Title: Crystal structure of fragment double-D from human fibrin with two different bound ligands.
PubMed ID: 9628725
DOI: 10.1021/bi9804129
PubMed ID: 10074346
Title: Conformational changes in fragments D and double-D from human fibrin(ogen) upon binding the peptide ligand Gly-His-Arg-Pro-amide.
PubMed ID: 10074346
DOI: 10.1021/bi982626w
PubMed ID: 19296670
PubMed ID: 2496144
Title: A gamma methionine-310 to threonine substitution and consequent N-glycosylation at gamma asparagine-308 identified in a congenital dysfibrinogenemia associated with posttraumatic bleeding, fibrinogen Asahi.
PubMed ID: 2496144
DOI: 10.1172/jci114056
PubMed ID: 1421174
Title: Gene analyses of abnormal fibrinogens with a mutation in the gamma chain.
PubMed ID: 1421174
PubMed ID: 2257302
Title: Fibrinogen Baltimore I: polymerization defect associated with a gamma 292Gly-->Val (GGC-->GTC) mutation.
PubMed ID: 2257302
PubMed ID: 2328317
Title: Polymerization defect of fibrinogen Baltimore III due to a gamma Asn308-->Ile mutation.
PubMed ID: 2328317
PubMed ID: 8400260
Title: Fibrinogen Bern I: substitution gamma 337 Asn-->Lys is responsible for defective fibrin monomer polymerization.
PubMed ID: 8400260
PubMed ID: 2971046
Title: Characterization of an apparently lower molecular weight gamma-chain variant in fibrinogen Kyoto I. The replacement of gamma-asparagine 308 by lysine which causes accelerated cleavage of fragment D1 by plasmin and the generation of a new plasmin cleavage site.
PubMed ID: 2971046
PubMed ID: 2819242
Title: Fibrinogen Kyoto III: a congenital dysfibrinogen with a gamma aspartic acid-330 to tyrosine substitution manifesting impaired fibrin monomer polymerization.
PubMed ID: 2819242
PubMed ID: 3708159
Title: Characterization of fibrinogen Milano I: amino acid exchange gamma 330 Asp-->Val impairs fibrin polymerization.
PubMed ID: 3708159
PubMed ID: 7841300
Title: Fibrinogen Milano V: a congenital dysfibrinogenaemia with a gamma 275 Arg-->Cys substitution.
PubMed ID: 7841300
PubMed ID: 8080993
Title: A new substitution, gamma 358 Ser-->Cys, in fibrinogen Milano VII causes defective fibrin polymerization.
PubMed ID: 8080993
PubMed ID: 2738036
Title: Fibrinogen Nagoya, a replacement of glutamine-329 by arginine in the gamma-chain that impairs the polymerization of fibrin monomer.
PubMed ID: 2738036
PubMed ID: 2971042
Title: Substitution of gamma Arg-275 by Cys in an abnormal fibrinogen, 'fibrinogen Osaka II'. Evidence for a unique solitary cystine structure at the mutation site.
PubMed ID: 2971042
PubMed ID: 1455400
Title: Heterozygous abnormal fibrinogen Osaka III with the replacement of gamma arginine-275 by histidine has an apparently higher molecular weight gamma-chain variant.
PubMed ID: 1455400
PubMed ID: 1733971
Title: Characterization of an abnormal fibrinogen Osaka V with the replacement of gamma-arginine 375 by glycine. The lack of high affinity calcium binding to D-domains and the lack of protective effect of calcium on fibrinolysis.
PubMed ID: 1733971
PubMed ID: 8470043
Title: Paris I dysfibrinogenemia: a point mutation in intron 8 results in insertion of a 15 amino acid sequence in the fibrinogen gamma-chain.
PubMed ID: 8470043
PubMed ID: 3337908
Title: An apparently higher molecular weight gamma-chain variant in a new congenital abnormal fibrinogen Tochigi characterized by the replacement of gamma arginine-275 by cysteine.
PubMed ID: 3337908
PubMed ID: 2071611
Title: A congenitally abnormal fibrinogen (Vlissingen) with a 6-base deletion in the gamma-chain gene, causing defective calcium binding and impaired fibrin polymerization.
PubMed ID: 2071611
PubMed ID: 3563970
Title: Three abnormal fibrinogen variants with the same amino acid substitution (gamma 275 Arg-->His): fibrinogens Bergamo II, Essen and Perugia.
PubMed ID: 3563970
PubMed ID: 2976995
Title: Normal plasmic cleavage of the gamma-chain variant of 'fibrinogen Saga' with an Arg-275 to His substitution.
PubMed ID: 2976995
PubMed ID: 11435303
Title: Fibrinogen Milano XII: a dysfunctional variant containing 2 amino acid substitutions, A-alpha R16C and gamma G165R.
PubMed ID: 11435303
PubMed ID: 10391209
Title: Characterization of single-nucleotide polymorphisms in coding regions of human genes.
PubMed ID: 10391209
DOI: 10.1038/10290
PubMed ID: 11986213
Title: Fibrinogen Hillsborough: a novel gamma-gly309asp dysfibrinogen with impaired clotting.
PubMed ID: 11986213
PubMed ID: 15632207
Title: Fibrinogen Philadelphia, a hypodysfibrinogenemia characterized by abnormal polymerization and fibrinogen hypercatabolism due to gamma S378P mutation.
PubMed ID: 15632207
PubMed ID: 25427968
Title: Clinical and molecular characterisation of 21 patients affected by quantitative fibrinogen deficiency.
PubMed ID: 25427968
DOI: 10.1160/th14-07-0629
Sequence Information:
- Length: 453
- Mass: 51512
- Checksum: 1787204904E0D4BB
- Sequence:
MSWSLHPRNL ILYFYALLFL SSTCVAYVAT RDNCCILDER FGSYCPTTCG IADFLSTYQT KVDKDLQSLE DILHQVENKT SEVKQLIKAI QLTYNPDESS KPNMIDAATL KSRKMLEEIM KYEASILTHD SSIRYLQEIY NSNNQKIVNL KEKVAQLEAQ CQEPCKDTVQ IHDITGKDCQ DIANKGAKQS GLYFIKPLKA NQQFLVYCEI DGSGNGWTVF QKRLDGSVDF KKNWIQYKEG FGHLSPTGTT EFWLGNEKIH LISTQSAIPY ALRVELEDWN GRTSTADYAM FKVGPEADKY RLTYAYFAGG DAGDAFDGFD FGDDPSDKFF TSHNGMQFST WDNDNDKFEG NCAEQDGSGW WMNKCHAGHL NGVYYQGGTY SKASTPNGYD NGIIWATWKT RWYSMKKTTM KIIPFNRLTI GEGQQHHLGG AKQVRPEHPA ETEYDSLYPE DDL
Genular Protein ID: 3010825293
Symbol: A0A140VJJ6_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 437
- Mass: 49497
- Checksum: 3D73A7BC1E71381B
- Sequence:
MSWSLHPRNL ILYFYALLFL SSTCVAYVAT RDNCCILDER FGSYCPTTCG IADFLSTYQT KVDKDLQSLE DILHQVENKT SEVKQLIKAI QLTYNPDESS KPNMIDAATL KSRKMLEEIM KYEASILTHD SSIRYLQEIY NSNNQKIVNL KEKVAQLEAQ CQEPCKDTVQ IHDITGKDCQ DIANKGAKQS GLYFIKPLKA NQQFLVYCEI DGSGNGWTVF QKRLDGSVDF KKNWIQYKEG FGHLSPTGTT EFWLGNEKIH LISTQSAIPY ALRVELEDWN GRTSTADYAM FKVGPEADKY RLTYAYFAGG DAGDAFDGFD FGDDPSDKFF TSHNGMQFST WDNDNDKFEG NCAEQDGSGW WMNKCHAGHL NGVYYQGGTY SKASTPNGYD NGIIWATWKT RWYSMKKTTM KIIPFNRLTI GEGQQHHLGG AKQAGDV