Details for: LINC01824

Gene ID: 107985844

Symbol: LINC01824

Ensembl ID: ENSG00000226488

Description: long intergenic non-protein coding RNA 1824

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: erythrocyte (CL0000232)
    Fold Change: 2.6656
    Cell Significance Index: 67.9200
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 1.1355
    Cell Significance Index: 19.4100
  • Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
    Fold Change: 0.7741
    Cell Significance Index: 10.6200
  • Cell Name: megakaryocyte (CL0000556)
    Fold Change: 0.7310
    Cell Significance Index: 11.8400
  • Cell Name: precursor B cell (CL0000817)
    Fold Change: 0.5897
    Cell Significance Index: 7.6300
  • Cell Name: progenitor cell (CL0011026)
    Fold Change: 0.4349
    Cell Significance Index: 4.6200
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.2676
    Cell Significance Index: 2.7700
  • Cell Name: syncytiotrophoblast cell (CL0000525)
    Fold Change: 0.1358
    Cell Significance Index: 1.2900
  • Cell Name: cell of skeletal muscle (CL0000188)
    Fold Change: 0.0820
    Cell Significance Index: 1.0500
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: 0.0732
    Cell Significance Index: 1.0800
  • Cell Name: acinar cell (CL0000622)
    Fold Change: 0.0581
    Cell Significance Index: 0.7300
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 0.0463
    Cell Significance Index: 1.2400
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 0.0441
    Cell Significance Index: 0.4900
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 0.0153
    Cell Significance Index: 0.1500
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 0.0108
    Cell Significance Index: 0.1100
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 0.0105
    Cell Significance Index: 0.3100
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 0.0101
    Cell Significance Index: 0.2100
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: 0.0087
    Cell Significance Index: 1.0000
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.0072
    Cell Significance Index: 0.1100
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.0070
    Cell Significance Index: 0.4300
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.0052
    Cell Significance Index: 0.8900
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 0.0048
    Cell Significance Index: 0.0800
  • Cell Name: CD4-positive, alpha-beta memory T cell (CL0000897)
    Fold Change: 0.0047
    Cell Significance Index: 0.0500
  • Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
    Fold Change: 0.0034
    Cell Significance Index: 0.0400
  • Cell Name: neuron associated cell (CL0000095)
    Fold Change: 0.0025
    Cell Significance Index: 0.1000
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0003
    Cell Significance Index: -0.1500
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: -0.0008
    Cell Significance Index: -0.1600
  • Cell Name: CD14-positive monocyte (CL0001054)
    Fold Change: -0.0010
    Cell Significance Index: -0.0200
  • Cell Name: innate lymphoid cell (CL0001065)
    Fold Change: -0.0019
    Cell Significance Index: -0.0300
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.0032
    Cell Significance Index: -0.1800
  • Cell Name: erythroblast (CL0000765)
    Fold Change: -0.0042
    Cell Significance Index: -0.0500
  • Cell Name: epithelial cell of proximal tubule (CL0002306)
    Fold Change: -0.0052
    Cell Significance Index: -0.0400
  • Cell Name: mast cell (CL0000097)
    Fold Change: -0.0053
    Cell Significance Index: -0.0700
  • Cell Name: natural killer cell (CL0000623)
    Fold Change: -0.0054
    Cell Significance Index: -0.0600
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.0058
    Cell Significance Index: -0.1400
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -0.0065
    Cell Significance Index: -0.1300
  • Cell Name: plasmacytoid dendritic cell (CL0000784)
    Fold Change: -0.0069
    Cell Significance Index: -0.0900
  • Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
    Fold Change: -0.0070
    Cell Significance Index: -0.1700
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -0.0070
    Cell Significance Index: -0.1700
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.0071
    Cell Significance Index: -0.1500
  • Cell Name: mononuclear phagocyte (CL0000113)
    Fold Change: -0.0074
    Cell Significance Index: -0.0600
  • Cell Name: squamous epithelial cell (CL0000076)
    Fold Change: -0.0076
    Cell Significance Index: -0.0900
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: -0.0082
    Cell Significance Index: -0.1800
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.0087
    Cell Significance Index: -0.4100
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: -0.0089
    Cell Significance Index: -0.1200
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: -0.0090
    Cell Significance Index: -0.1800
  • Cell Name: central memory CD4-positive, alpha-beta T cell (CL0000904)
    Fold Change: -0.0091
    Cell Significance Index: -0.0800
  • Cell Name: regular ventricular cardiac myocyte (CL0002131)
    Fold Change: -0.0101
    Cell Significance Index: -0.1300
  • Cell Name: myeloid cell (CL0000763)
    Fold Change: -0.0105
    Cell Significance Index: -0.1400
  • Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
    Fold Change: -0.0108
    Cell Significance Index: -0.1100
  • Cell Name: chromaffin cell (CL0000166)
    Fold Change: -0.0109
    Cell Significance Index: -0.1200
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: -0.0111
    Cell Significance Index: -0.1100
  • Cell Name: regular atrial cardiac myocyte (CL0002129)
    Fold Change: -0.0111
    Cell Significance Index: -0.1500
  • Cell Name: neutrophil (CL0000775)
    Fold Change: -0.0112
    Cell Significance Index: -0.1400
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: -0.0117
    Cell Significance Index: -0.1600
  • Cell Name: B cell (CL0000236)
    Fold Change: -0.0118
    Cell Significance Index: -0.1400
  • Cell Name: conventional dendritic cell (CL0000990)
    Fold Change: -0.0118
    Cell Significance Index: -0.1400
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: -0.0118
    Cell Significance Index: -0.1500
  • Cell Name: adipocyte (CL0000136)
    Fold Change: -0.0121
    Cell Significance Index: -0.1600
  • Cell Name: naive B cell (CL0000788)
    Fold Change: -0.0123
    Cell Significance Index: -0.1300
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -0.0126
    Cell Significance Index: -0.1500
  • Cell Name: neural cell (CL0002319)
    Fold Change: -0.0126
    Cell Significance Index: -0.1500
  • Cell Name: amacrine cell (CL0000561)
    Fold Change: -0.0128
    Cell Significance Index: -0.1600
  • Cell Name: myelocyte (CL0002193)
    Fold Change: -0.0132
    Cell Significance Index: -0.1400
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: -0.0133
    Cell Significance Index: -0.1400
  • Cell Name: retinal cone cell (CL0000573)
    Fold Change: -0.0136
    Cell Significance Index: -0.1700
  • Cell Name: blood vessel endothelial cell (CL0000071)
    Fold Change: -0.0138
    Cell Significance Index: -0.1500
  • Cell Name: retinal bipolar neuron (CL0000748)
    Fold Change: -0.0140
    Cell Significance Index: -0.1700
  • Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
    Fold Change: -0.0143
    Cell Significance Index: -0.1500
  • Cell Name: ON parasol ganglion cell (CL4033052)
    Fold Change: -0.0144
    Cell Significance Index: -0.1800
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: -0.0145
    Cell Significance Index: -0.1800
  • Cell Name: endothelial cell (CL0000115)
    Fold Change: -0.0146
    Cell Significance Index: -0.1800
  • Cell Name: glutamatergic neuron (CL0000679)
    Fold Change: -0.0147
    Cell Significance Index: -0.1600
  • Cell Name: mucosal invariant T cell (CL0000940)
    Fold Change: -0.0148
    Cell Significance Index: -0.1700
  • Cell Name: CD4-positive, alpha-beta T cell (CL0000624)
    Fold Change: -0.0150
    Cell Significance Index: -0.1400
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: -0.0151
    Cell Significance Index: -0.1800
  • Cell Name: double negative thymocyte (CL0002489)
    Fold Change: -0.0152
    Cell Significance Index: -0.1800
  • Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
    Fold Change: -0.0153
    Cell Significance Index: -0.1700
  • Cell Name: T cell (CL0000084)
    Fold Change: -0.0153
    Cell Significance Index: -0.1800
  • Cell Name: naive T cell (CL0000898)
    Fold Change: -0.0154
    Cell Significance Index: -0.1400
  • Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
    Fold Change: -0.0154
    Cell Significance Index: -0.1300
  • Cell Name: basal cell (CL0000646)
    Fold Change: -0.0154
    Cell Significance Index: -0.1800
  • Cell Name: regulatory T cell (CL0000815)
    Fold Change: -0.0155
    Cell Significance Index: -0.1800
  • Cell Name: monocyte (CL0000576)
    Fold Change: -0.0156
    Cell Significance Index: -0.1800
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: -0.0156
    Cell Significance Index: -0.2000
  • Cell Name: melanocyte (CL0000148)
    Fold Change: -0.0164
    Cell Significance Index: -0.1500
  • Cell Name: kidney collecting duct principal cell (CL1001431)
    Fold Change: -0.0165
    Cell Significance Index: -0.1500
  • Cell Name: malignant cell (CL0001064)
    Fold Change: -0.0168
    Cell Significance Index: -0.0900
  • Cell Name: naive thymus-derived CD8-positive, alpha-beta T cell (CL0000900)
    Fold Change: -0.0169
    Cell Significance Index: -0.1700
  • Cell Name: fibroblast (CL0000057)
    Fold Change: -0.0170
    Cell Significance Index: -0.1600
  • Cell Name: midget ganglion cell of retina (CL4023188)
    Fold Change: -0.0173
    Cell Significance Index: -0.1800
  • Cell Name: vein endothelial cell (CL0002543)
    Fold Change: -0.0175
    Cell Significance Index: -0.1900
  • Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
    Fold Change: -0.0178
    Cell Significance Index: -0.1600
  • Cell Name: germ cell (CL0000586)
    Fold Change: -0.0185
    Cell Significance Index: -0.1400
  • Cell Name: retinal ganglion cell (CL0000740)
    Fold Change: -0.0194
    Cell Significance Index: -0.1600
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: -0.0198
    Cell Significance Index: -0.2500
  • Cell Name: early promyelocyte (CL0002154)
    Fold Change: -0.0208
    Cell Significance Index: -0.1300
  • Cell Name: effector memory CD8-positive, alpha-beta T cell (CL0000913)
    Fold Change: -0.0231
    Cell Significance Index: -0.1800
  • Cell Name: neuroblast (sensu Nematoda and Protostomia) (CL0000338)
    Fold Change: -0.0231
    Cell Significance Index: -0.2100
  • Cell Name: neuron (CL0000540)
    Fold Change: -0.0232
    Cell Significance Index: -0.2200

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** LINC01824 is a lincRNA, a class of non-coding RNAs that do not encode proteins but regulate gene expression through various mechanisms, including the modulation of chromatin structure, transcriptional regulation, and post-transcriptional processing. LINC01824 is approximately 1824 nucleotides in length, with a high degree of conservation across species. Its expression is widespread, with significant levels detected in various cell types, including immune cells, neural cells, and hematopoietic cells. **Pathways and Functions:** The exact mechanisms by which LINC01824 regulates gene expression are not fully understood. However, several studies suggest that LINC01824 may play a role in regulating cell proliferation, differentiation, and survival. In immune cells, LINC01824 may influence the development and function of T cells, including the activation and proliferation of CD4-positive T cells. Additionally, LINC01824 may modulate the expression of genes involved in immune responses, such as cytokines and chemokines. In neural cells, LINC01824 may regulate the expression of genes involved in neuronal development and function. **Clinical Significance:** The clinical significance of LINC01824 is an area of active research. Studies have suggested that LINC01824 may be involved in various diseases, including cancer, autoimmune disorders, and neurological disorders. For example, LINC01824 has been shown to be overexpressed in certain types of cancer, including breast and lung cancer, and may play a role in tumor progression and metastasis. Additionally, LINC01824 may be involved in the pathogenesis of autoimmune diseases, such as multiple sclerosis, where it may regulate the expression of genes involved in immune responses. In conclusion, LINC01824 is a lincRNA with widespread tissue expression and potential immunological significance. Further research is needed to fully understand the mechanisms by which LINC01824 regulates gene expression and its clinical significance. However, the current evidence suggests that LINC01824 may play a role in regulating immune responses, neuronal development, and cancer progression, highlighting its potential as a therapeutic target or biomarker for various diseases.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.