No CSI details found for gene ID: 5232
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 719043473
Symbol: PGK2_HUMAN
Name: Phosphoglycerate kinase 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 3453121
Title: Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene.
PubMed ID: 3453121
DOI: 10.1038/326501a0
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 14574404
Title: The DNA sequence and analysis of human chromosome 6.
PubMed ID: 14574404
DOI: 10.1038/nature02055
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 26677959
Title: Characteristics of testis-specific phosphoglycerate kinase 2 and its association with human sperm quality.
PubMed ID: 26677959
Sequence Information:
- Length: 417
- Mass: 44796
- Checksum: 0CD5C71C2D3A9272
- Sequence:
MSLSKKLTLD KLDVRGKRVI MRVDFNVPMK KNQITNNQRI KASIPSIKYC LDNGAKAVVL MSHLGRPDGV PMPDKYSLAP VAVELKSLLG KDVLFLKDCV GAEVEKACAN PAPGSVILLE NLRFHVEEEG KGQDPSGKKI KAEPDKIEAF RASLSKLGDV YVNDAFGTAH RAHSSMVGVN LPHKASGFLM KKELDYFAKA LENPVRPFLA ILGGAKVADK IQLIKNMLDK VNEMIIGGGM AYTFLKVLNN MEIGASLFDE EGAKIVKDIM AKAQKNGVRI TFPVDFVTGD KFDENAQVGK ATVASGISPG WMGLDCGPES NKNHAQVVAQ ARLIVWNGPL GVFEWDAFAK GTKALMDEIV KATSKGCITV IGGGDTATCC AKWNTEDKVS HVSTGGGASL ELLEGKILPG VEALSNM
Details Unavailable
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{
"geneID": 5232,
"tax": {
"id": 9606,
"name": [
{
"name": "Homo sapiens Linnaeus 1758"
},
{
"name": "Homo sapiens",
"type": 0
},
{
"name": "human",
"type": 4
}
]
},
"accession": {
"gene": [
"AL121974.16"
]
},
"genePos": {
"start": 49785660,
"end": 49787285
},
"orientation": false,
"symbol": "PGK2",
"created": {
"$date": {
"$numberLong": "1738333349081"
}
},
"crossReference": {
"enseGeneID": "ENSG00000170950",
"enseRnaID": [
"ENST00000304801.6"
],
"enseProtID": [
"ENSP00000305995.3"
]
},
"chrom": {
"pos": "6",
"type": 1,
"loc": "6p12.3"
},
"desc": "phosphoglycerate kinase 2",
"geneType": 5,
"mim": [
{
"id": 172270,
"relation": 0
}
],
"ontology": [
{
"id": "R-HSA-1430728",
"term": "Metabolism",
"cat": 10
},
{
"id": "R-HSA-71387",
"term": "Metabolism of carbohydrates",
"cat": 11
},
{
"id": "R-HSA-70326",
"term": "Glucose metabolism",
"cat": 12
},
{
"id": "R-HSA-70171",
"term": "Glycolysis",
"cat": 13
},
{
"id": "R-HSA-70263",
"term": "Gluconeogenesis",
"cat": 13
},
{
"id": "GO:0004618",
"term": "phosphoglycerate kinase activity",
"pubMed": [
1278465,
5009693
],
"cat": 0
},
{
"id": "GO:0004618",
"term": "phosphoglycerate kinase activity",
"cat": 0
},
{
"id": "GO:0004618",
"term": "phosphoglycerate kinase activity",
"pubMed": [
3453121
],
"cat": 0
},
{
"id": "GO:0005515",
"term": "protein binding",
"pubMed": [
28514442,
33961781,
35271311
],
"cat": 0
},
{
"id": "GO:0005524",
"term": "ATP binding",
"cat": 0
},
{
"id": "GO:0043531",
"term": "ADP binding",
"cat": 0
},
{
"id": "GO:0006094",
"term": "gluconeogenesis",
"cat": 1
},
{
"id": "GO:0006096",
"term": "glycolytic process",
"cat": 1
},
{
"id": "GO:0006096",
"term": "glycolytic process",
"pubMed": [
3453121
],
"cat": 1
},
{
"id": "GO:0016310",
"term": "phosphorylation",
"cat": 1
},
{
"id": "GO:0016310",
"term": "phosphorylation",
"pubMed": [
3453121
],
"cat": 1
},
{
"id": "GO:0030317",
"term": "flagellated sperm motility",
"cat": 1
},
{
"id": "GO:0061621",
"term": "canonical glycolysis",
"cat": 1
},
{
"id": "GO:0005634",
"term": "nucleus",
"pubMed": [
21630459
],
"cat": 2
},
{
"id": "GO:0005829",
"term": "cytosol",
"cat": 2
},
{
"id": "GO:0035686",
"term": "sperm fibrous sheath",
"cat": 2
},
{
"id": "GO:0070062",
"term": "extracellular exosome",
"pubMed": [
23533145
],
"cat": 2
}
],
"protein": [
{
"symbol": "PGK2_HUMAN",
"name": "Phosphoglycerate kinase 2",
"accession": [
"P07205",
"B2R6Y8",
"Q9H107"
],
"databaseIDs": {
"NCBI Taxonomy": [
"9606"
],
"Rhea": [
"RHEA:14801"
],
"ChEBI": [
"CHEBI:30616",
"CHEBI:57604",
"CHEBI:58272",
"CHEBI:456216",
"CHEBI:30616",
"CHEBI:30616",
"CHEBI:30616",
"CHEBI:30616"
],
"EC": [
"2.7.2.3",
"2.7.2.3"
],
"EMBL": [
"X05246",
"AK312770",
"AL121974",
"BC038843"
],
"CCDS": [
"CCDS4930.1"
],
"PIR": [
"A24030",
"A27816"
],
"RefSeq": [
"NP_620061.2"
],
"AlphaFoldDB": [
"P07205"
],
"SMR": [
"P07205"
],
"BioGRID": [
"111253"
],
"IntAct": [
"P07205"
],
"MINT": [
"P07205"
],
"STRING": [
"9606.ENSP00000305995"
],
"BindingDB": [
"P07205"
],
"ChEMBL": [
"CHEMBL2096677"
],
"DrugBank": [
"DB00787"
],
"GlyGen": [
"P07205"
],
"iPTMnet": [
"P07205"
],
"PhosphoSitePlus": [
"P07205"
],
"SwissPalm": [
"P07205"
],
"BioMuta": [
"PGK2"
],
"DMDM": [
"21264485"
],
"jPOST": [
"P07205"
],
"MassIVE": [
"P07205"
],
"PaxDb": [
"9606-ENSP00000305995"
],
"PeptideAtlas": [
"P07205"
],
"PRIDE": [
"P07205"
],
"ProteomicsDB": [
"51974"
],
"Pumba": [
"P07205"
],
"Antibodypedia": [
"30847"
],
"DNASU": [
"5232"
],
"Ensembl": [
"ENST00000304801.6"
],
"KEGG": [
"hsa:5232"
],
"MANE-Select": [
"ENST00000304801.6"
],
"UCSC": [
"uc003ozu.4"
],
"AGR": [
"HGNC:8898"
],
"CTD": [
"5232"
],
"DisGeNET": [
"5232"
],
"GeneCards": [
"PGK2"
],
"HGNC": [
"HGNC:8898"
],
"HPA": [
"ENSG00000170950"
],
"MIM": [
"172270"
],
"neXtProt": [
"NX_P07205"
],
"OpenTargets": [
"ENSG00000170950"
],
"PharmGKB": [
"PA33237"
],
"VEuPathDB": [
"HostDB:ENSG00000170950"
],
"eggNOG": [
"KOG1367"
],
"GeneTree": [
"ENSGT00390000008820"
],
"HOGENOM": [
"CLU_025427_0_0_1"
],
"InParanoid": [
"P07205"
],
"OMA": [
"DMIFDIG"
],
"OrthoDB": [
"5477183at2759"
],
"PhylomeDB": [
"P07205"
],
"TreeFam": [
"TF300489"
],
"BioCyc": [
"MetaCyc:HS10215-MONOMER"
],
"BRENDA": [
"2.7.2.3"
],
"PathwayCommons": [
"P07205"
],
"Reactome": [
"R-HSA-70171",
"R-HSA-70263"
],
"SignaLink": [
"P07205"
],
"SIGNOR": [
"P07205"
],
"UniPathway": [
"UPA00109"
],
"BioGRID-ORCS": [
"5232"
],
"GenomeRNAi": [
"5232"
],
"Pharos": [
"P07205"
],
"PRO": [
"PR:P07205"
],
"Proteomes": [
"UP000005640"
],
"RNAct": [
"P07205"
],
"Bgee": [
"ENSG00000170950"
],
"ExpressionAtlas": [
"P07205"
],
"GO": [
"GO:0005829",
"GO:0070062",
"GO:0005634",
"GO:0035686",
"GO:0043531",
"GO:0005524",
"GO:0004618",
"GO:0061621",
"GO:0030317",
"GO:0006094",
"GO:0006096",
"GO:0016310"
],
"CDD": [
"cd00318"
],
"Gene3D": [
"3.40.50.1260"
],
"HAMAP": [
"MF_00145"
],
"InterPro": [
"IPR001576",
"IPR015911",
"IPR015824",
"IPR036043"
],
"PANTHER": [
"PTHR11406",
"PTHR11406:SF10"
],
"Pfam": [
"PF00162"
],
"PIRSF": [
"PIRSF000724"
],
"PRINTS": [
"PR00477"
],
"SUPFAM": [
"SSF53748"
],
"PROSITE": [
"PS00111"
]
},
"citations": [
{
"title": "Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene.",
"pubmedID": "3453121",
"doi": "10.1038\/326501a0"
},
{
"title": "Complete sequencing and characterization of 21,243 full-length human cDNAs.",
"pubmedID": "14702039",
"doi": "10.1038\/ng1285"
},
{
"title": "The DNA sequence and analysis of human chromosome 6.",
"pubmedID": "14574404",
"doi": "10.1038\/nature02055"
},
{
"title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
"pubmedID": "15489334",
"doi": "10.1101\/gr.2596504"
},
{
"title": "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.",
"pubmedID": "19690332",
"doi": "10.1126\/scisignal.2000007"
},
{
"title": "Initial characterization of the human central proteome.",
"pubmedID": "21269460",
"doi": "10.1186\/1752-0509-5-17"
},
{
"title": "Characteristics of testis-specific phosphoglycerate kinase 2 and its association with human sperm quality.",
"pubmedID": "26677959",
"doi": "10.1093\/humrep\/dev301"
}
],
"sequence": {
"length": 417,
"mass": 44796,
"checksum": "0CD5C71C2D3A9272",
"modified": {
"$date": {
"$numberLong": "1169510400000"
}
},
"version": 3,
"sequence": "MSLSKKLTLDKLDVRGKRVIMRVDFNVPMKKNQITNNQRIKASIPSIKYCLDNGAKAVVLMSHLGRPDGVPMPDKYSLAPVAVELKSLLGKDVLFLKDCVGAEVEKACANPAPGSVILLENLRFHVEEEGKGQDPSGKKIKAEPDKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPHKASGFLMKKELDYFAKALENPVRPFLAILGGAKVADKIQLIKNMLDKVNEMIIGGGMAYTFLKVLNNMEIGASLFDEEGAKIVKDIMAKAQKNGVRITFPVDFVTGDKFDENAQVGKATVASGISPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFAKGTKALMDEIVKATSKGCITVIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVEALSNM"
},
"existence": 0,
"relevance": 1,
"proteinID": 719043473
}
],
"singleCellExpressions": {
"cellSignificanceIndex": []
}
}