No CSI details found for gene ID: 6756
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 3777243702
Symbol: SSX1_HUMAN
Name: Protein SSX1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7539744
Title: Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma.
PubMed ID: 7539744
PubMed ID: 15772651
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7655467
Title: Identification of two alternative fusion genes, SYT-SSX1 and SYT-SSX2, in t(X;18)(p11.2;q11.2)-positive synovial sarcomas.
PubMed ID: 7655467
DOI: 10.1093/hmg/4.6.1097
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 36796361
Title: Deficiency of primate-specific SSX1 induced asthenoteratozoospermia in infertile men and cynomolgus monkey and tree shrew models.
PubMed ID: 36796361
Sequence Information:
- Length: 188
- Mass: 21931
- Checksum: E440D1B2AE3AE9F7
- Sequence:
MNGDDTFAKR PRDDAKASEK RSKAFDDIAT YFSKKEWKKM KYSEKISYVY MKRNYKAMTK LGFKVTLPPF MCNKQATDFQ GNDFDNDHNR RIQVEHPQMT FGRLHRIIPK IMPKKPAEDE NDSKGVSEAS GPQNDGKQLH PPGKANISEK INKRSGPKRG KHAWTHRLRE RKQLVIYEEI SDPEEDDE
Details Unavailable
Detailed CSI data for this gene is not available. You will be redirected to a page with all available raw data in 3 seconds.
If you are not redirected automatically, please click here.
{
"geneID": 6756,
"tax": {
"id": 9606,
"name": [
{
"name": "Homo sapiens Linnaeus 1758"
},
{
"name": "Homo sapiens",
"type": 0
},
{
"name": "human",
"type": 4
}
]
},
"accession": {
"gene": [
"AC245047.1"
]
},
"genePos": {
"start": 5031,
"end": 17083
},
"orientation": false,
"symbol": "SSX1",
"created": {
"$date": {
"$numberLong": "1738333349190"
}
},
"crossReference": {
"enseGeneID": "ENSG00000126752",
"enseRnaID": [
"ENST00000376919.4"
],
"enseProtID": [
"ENSP00000366118.3"
]
},
"chrom": {
"loc": "Xp11.23"
},
"desc": "SSX family member 1",
"geneType": 5,
"mim": [
{
"id": 301099,
"relation": 1,
"cui": 5829558
},
{
"id": 312820,
"relation": 0
}
],
"ontology": [
{
"id": "GO:0003714",
"term": "transcription corepressor activity",
"pubMed": [
10072425
],
"cat": 0
},
{
"id": "GO:0005515",
"term": "protein binding",
"pubMed": [
25416956,
32296183
],
"cat": 0
},
{
"id": "GO:0000122",
"term": "negative regulation of transcription by RNA polymerase II",
"pubMed": [
10072425
],
"cat": 1
},
{
"id": "GO:0007283",
"term": "spermatogenesis",
"pubMed": [
36796361
],
"cat": 1
},
{
"id": "GO:0005634",
"term": "nucleus",
"cat": 2
},
{
"id": "GO:0005634",
"term": "nucleus",
"pubMed": [
10072425
],
"cat": 2
},
{
"id": "GO:0005737",
"term": "cytoplasm",
"cat": 2
},
{
"id": "GO:0005856",
"term": "cytoskeleton",
"cat": 2
},
{
"id": "GO:0036126",
"term": "sperm flagellum",
"pubMed": [
36796361
],
"cat": 2
}
],
"geneRelations": [
{
"type": 8,
"similarGenes": [
"100996564"
]
}
],
"protein": [
{
"symbol": "SSX1_HUMAN",
"name": "Protein SSX1",
"accession": [
"Q16384",
"A3KN76",
"Q08AJ2",
"Q5JQ64"
],
"databaseIDs": {
"NCBI Taxonomy": [
"9606"
],
"MIM": [
"301099",
"301099",
"312820"
],
"EMBL": [
"X86174",
"AL683817",
"BC001003",
"BC125151",
"BC128611",
"BC133693",
"BC150487",
"S79325"
],
"CCDS": [
"CCDS14290.1"
],
"PIR": [
"S55057"
],
"RefSeq": [
"NP_001265620.1",
"NP_005626.1"
],
"PDB": [
"8HR1"
],
"PDBsum": [
"8HR1"
],
"AlphaFoldDB": [
"Q16384"
],
"EMDB": [
"EMD-34956"
],
"SMR": [
"Q16384"
],
"BioGRID": [
"112634"
],
"IntAct": [
"Q16384"
],
"STRING": [
"9606.ENSP00000366118"
],
"iPTMnet": [
"Q16384"
],
"PhosphoSitePlus": [
"Q16384"
],
"BioMuta": [
"SSX1"
],
"DMDM": [
"3915027"
],
"MassIVE": [
"Q16384"
],
"PaxDb": [
"9606-ENSP00000366118"
],
"PeptideAtlas": [
"Q16384"
],
"ProteomicsDB": [
"60866"
],
"Pumba": [
"Q16384"
],
"Antibodypedia": [
"25598"
],
"DNASU": [
"6756"
],
"Ensembl": [
"ENST00000376919.4"
],
"KEGG": [
"hsa:6756"
],
"MANE-Select": [
"ENST00000376919.4"
],
"UCSC": [
"uc004djb.2"
],
"AGR": [
"HGNC:11335"
],
"CTD": [
"6756"
],
"DisGeNET": [
"6756"
],
"GeneCards": [
"SSX1"
],
"HGNC": [
"HGNC:11335"
],
"HPA": [
"ENSG00000126752"
],
"MalaCards": [
"SSX1"
],
"neXtProt": [
"NX_Q16384"
],
"OpenTargets": [
"ENSG00000126752"
],
"Orphanet": [
"3273"
],
"PharmGKB": [
"PA36159"
],
"VEuPathDB": [
"HostDB:ENSG00000126752"
],
"eggNOG": [
"ENOG502RU1A"
],
"GeneTree": [
"ENSGT00390000012484"
],
"HOGENOM": [
"CLU_097196_1_0_1"
],
"InParanoid": [
"Q16384"
],
"OMA": [
"PPAFMCP"
],
"OrthoDB": [
"4665403at2759"
],
"PhylomeDB": [
"Q16384"
],
"TreeFam": [
"TF338517"
],
"PathwayCommons": [
"Q16384"
],
"SignaLink": [
"Q16384"
],
"BioGRID-ORCS": [
"6756"
],
"ChiTaRS": [
"SSX1"
],
"GeneWiki": [
"SSX1"
],
"GenomeRNAi": [
"6756"
],
"Pharos": [
"Q16384"
],
"PRO": [
"PR:Q16384"
],
"Proteomes": [
"UP000005640"
],
"RNAct": [
"Q16384"
],
"Bgee": [
"ENSG00000126752"
],
"GO": [
"GO:0005737",
"GO:0005856",
"GO:0005634",
"GO:0036126",
"GO:0003714",
"GO:0000122",
"GO:0007283"
],
"InterPro": [
"IPR003655",
"IPR001909",
"IPR036051",
"IPR019041"
],
"PANTHER": [
"PTHR14112:SF26",
"PTHR14112"
],
"Pfam": [
"PF09514"
],
"SMART": [
"SM00349"
],
"SUPFAM": [
"SSF109640"
],
"PROSITE": [
"PS50806"
]
},
"citations": [
{
"title": "Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma.",
"pubmedID": "7539744",
"doi": "10.1002\/j.1460-2075.1995.tb07228.x"
},
{
"title": "The DNA sequence of the human X chromosome.",
"pubmedID": "15772651",
"doi": "10.1038\/nature03440"
},
{
"title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
"pubmedID": "15489334",
"doi": "10.1101\/gr.2596504"
},
{
"title": "Identification of two alternative fusion genes, SYT-SSX1 and SYT-SSX2, in t(X;18)(p11.2;q11.2)-positive synovial sarcomas.",
"pubmedID": "7655467",
"doi": "10.1093\/hmg\/4.6.1097"
},
{
"title": "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
"pubmedID": "23186163",
"doi": "10.1021\/pr300630k"
},
{
"title": "Deficiency of primate-specific SSX1 induced asthenoteratozoospermia in infertile men and cynomolgus monkey and tree shrew models.",
"pubmedID": "36796361",
"doi": "10.1016\/j.ajhg.2023.01.016"
}
],
"sequence": {
"length": 188,
"mass": 21931,
"checksum": "E440D1B2AE3AE9F7",
"modified": {
"$date": {
"$numberLong": "913680000000"
}
},
"version": 2,
"sequence": "MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTKLGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDE"
},
"existence": 0,
"relevance": 1,
"proteinID": 3777243702
}
],
"singleCellExpressions": {
"cellSignificanceIndex": []
}
}