Details for: YIF1B
Gene ID: 90522
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: YIF1B
Ensembl ID: ENSG00000167645
Description: Yip1 interacting factor homolog B, membrane trafficking protein
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 17.62rCSI 15.26%PRS 77.07
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CSI 11.91rCSI 7.91%PRS 75.22
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CSI 10.31rCSI 8.11%PRS 78.81
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CSI 9.09rCSI 13.88%PRS 85.74
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CSI 7.89rCSI 17.91%PRS 74.25
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CSI 7.45rCSI 10.75%PRS 80.05
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CSI 7.31rCSI 11.29%PRS 71.34
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CSI 6.55rCSI 11.22%PRS 80.08
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CSI 6.46rCSI 5.22%PRS 74.41
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CSI 6.26rCSI 27.18%PRS 80.84
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CSI 6.23rCSI 9.39%PRS 77.56
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CSI 5.79rCSI 11.63%PRS 61.55
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CSI 5.66rCSI 5.56%PRS 86.94
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CSI 5.06rCSI 4.57%PRS 69.73
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CSI 4.86rCSI 7.82%PRS 61.72
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CSI 4.71rCSI 6.83%PRS 86.41
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CSI 4.4rCSI 3.07%PRS 75.44
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CSI 3.57rCSI 2.98%PRS 77.08
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CSI 3.57rCSI 2.38%PRS 87.49
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CSI 3.52rCSI 4.39%PRS 82.44
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CSI 3.52rCSI 23.12%PRS 92.13
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CSI 3.35rCSI 5.15%PRS 81.59
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CSI 3.33rCSI 4.9%PRS 65.14
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CSI 3.28rCSI 7.33%PRS 80.23
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CSI 3rCSI 10.16%PRS 72.83
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CSI 2.97rCSI 2.46%PRS 74.75
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CSI 2.91rCSI 3.95%PRS 82.09
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CSI 2.9rCSI 2.2%PRS 85.42
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CSI 2.74rCSI 4.93%PRS 65.42
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CSI 2.7rCSI 2.4%PRS 70.24
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CSI 2.67rCSI 2%PRS 86.22
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CSI 2.66rCSI 1.85%PRS 86.81
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CSI 2.59rCSI 3.26%PRS 83.06
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CSI 2.49rCSI 6.34%PRS 65.93
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CSI 2.48rCSI 4.24%PRS 90.56
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CSI 2.46rCSI 2.52%PRS 82.98
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CSI 2.46rCSI 2.99%PRS 79.25
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CSI 2.45rCSI 14.03%PRS 79.67
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CSI 2.39rCSI 1.89%PRS 59.7
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CSI 2.37rCSI 1.96%PRS 72.61
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CSI 2.35rCSI 11.8%PRS 84.71
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CSI 2.33rCSI 3.01%PRS 54.79
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CSI 2.33rCSI 2.8%PRS 70.37
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CSI 2.29rCSI 1.77%PRS 75.66
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CSI 2.27rCSI 7.09%PRS 55.24
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CSI 2.27rCSI 1.75%PRS 74.37
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CSI 2.22rCSI 2.05%PRS 73.96
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CSI 2.19rCSI 3.35%PRS 76.56
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CSI 2.19rCSI 1.92%PRS 77.83
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CSI 2.16rCSI 2.58%PRS 88.95
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CSI 2.13rCSI 2.33%PRS 75.1
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CSI 2.1rCSI 2.1%PRS 65.98
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CSI 2.07rCSI 3.92%PRS 81.89
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CSI 2.04rCSI 1.96%PRS 64.33
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CSI 2.01rCSI 2.48%PRS 69.48
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CSI 1.96rCSI 2.44%PRS 51.46
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CSI 1.95rCSI 1.79%PRS 81.18
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CSI 1.9rCSI 2.34%PRS 80.47
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CSI 1.84rCSI 2.69%PRS 77.27
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CSI 1.82rCSI 1.6%PRS 60.6
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CSI 1.77rCSI 2.31%PRS 84.42
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CSI 1.75rCSI 1.32%PRS 78.26
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CSI 1.72rCSI 2.06%PRS 53.28
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CSI 1.72rCSI 7.15%PRS 72.15
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CSI 1.72rCSI 2.15%PRS 82.17
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CSI 1.66rCSI 2.01%PRS 80.95
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CSI 1.66rCSI 2.64%PRS 64.02
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CSI 1.66rCSI 2.12%PRS 68.83
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CSI 1.65rCSI 3.63%PRS 76.54
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CSI 1.61rCSI 2.24%PRS 70.92
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CSI 1.61rCSI 2.61%PRS 67.99
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CSI 1.61rCSI 2.7%PRS 53.43
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CSI 1.55rCSI 2.74%PRS 52.54
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CSI 1.5rCSI 1.73%PRS 63.53
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CSI 1.43rCSI 2.19%PRS 80.91
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CSI 1.43rCSI 2.09%PRS 67.26
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CSI 1.3rCSI 1.99%PRS 68.81
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CSI 1.16rCSI 1.58%PRS 63.56
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CSI 0.99rCSI 1.18%PRS 85.6
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CSI 0.98rCSI 3.46%PRS 82.46
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CSI 0.93rCSI 3.03%PRS 71.21
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CSI 0.93rCSI 4.98%PRS 93.5
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CSI 0.78rCSI 2.49%PRS 75.8
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CSI 0.77rCSI 3.44%PRS 72.57
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CSI 0.72rCSI 3.87%PRS 81.11
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CSI 0.66rCSI 2.34%PRS 78.35
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CSI 0.55rCSI 1.99%PRS 51.56
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CSI 0.46rCSI 3.61%PRS 80.04
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CSI 0.34rCSI 4.48%PRS 92.33
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CSI 0.22rCSI 4.09%PRS 92.73
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 1985017164
Symbol: YIF1B_HUMAN
Name: YIP1-interacting factor homolog B
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 12975309
Title: The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
PubMed ID: 12975309
DOI: 10.1101/gr.1293003
PubMed ID: 15498874
Title: Large-scale cDNA transfection screening for genes related to cancer development and progression.
PubMed ID: 15498874
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 26077767
Title: Yif1B Is Involved in the Anterograde Traffic Pathway and the Golgi Architecture.
PubMed ID: 26077767
DOI: 10.1111/tra.12306
PubMed ID: 30877195
Title: Lysosomal targeting of the ABC transporter TAPL is determined by membrane-localized charged residues.
PubMed ID: 30877195
PubMed ID: 32006098
Title: Truncating mutations in YIF1B cause a progressive encephalopathy with various degrees of mixed movement disorder, microcephaly, and epilepsy.
PubMed ID: 32006098
PubMed ID: 33103737
Title: YIF1B mutations cause a post-natal neurodevelopmental syndrome associated with Golgi and primary cilium alterations.
PubMed ID: 33103737
Sequence Information:
- Length: 314
- Mass: 34435
- Checksum: 93A2521A3332D3AD
- Sequence:
MHPAGLAAAA AGTPRLRKWP SKRRIPVSQP GMADPHQLFD DTSSAQSRGY GAQRAPGGLS YPAASPTPHA AFLADPVSNM AMAYGSSLAA QGKELVDKNI DRFIPITKLK YYFAVDTMYV GRKLGLLFFP YLHQDWEVQY QQDTPVAPRF DVNAPDLYIP AMAFITYVLV AGLALGTQDR FSPDLLGLQA SSALAWLTLE VLAILLSLYL VTVNTDLTTI DLVAFLGYKY VGMIGGVLMG LLFGKIGYYL VLGWCCVAIF VFMIRTLRLK ILADAAAEGV PVRGARNQLR MYLTMAVAAA QPMLMYWLTF HLVR
Genular Protein ID: 1004595385
Symbol: Q9H5F7_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11181995
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 142
- Mass: 14931
- Checksum: A89A2B0E3F35BE00
- Sequence:
MLSCCLEPAA WDCGAEGRDG REEMVLGWKR DRGTTPRTLP ASPSAGTPLW GAGHVLGDAG ESPLPSHPCP NRWSCCWSRK SCGVLAGWRC GSEAAPLTQP PEVGGLRQDP GVRGNPSLPA PPQPVMRRLT FGPGPAPASD RP