Details for: PRRC2B

Gene ID: 84726

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: PRRC2B

Ensembl ID: ENSG00000288701

Description: proline rich coiled-coil 2B

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • lung neuroendocrine cell CL1000223
    CSI 22.69
    rCSI 33.56%
    PRS 84.94
  • sncg GABAergic cortical interneuron CL4023015
    CSI 17.16
    rCSI 27.59%
    PRS 65.18
  • mucus secreting cell CL0000319
    CSI 16.56
    rCSI 26.3%
    PRS 89.15
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 15.88
    rCSI 26.65%
    PRS 63.61
  • cardiac muscle cell CL0000746
    CSI 14.25
    rCSI 20.45%
    PRS 71.2
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 12.3
    rCSI 29.89%
    PRS 61.62
  • pulmonary artery endothelial cell CL1001568
    CSI 11.79
    rCSI 16.04%
    PRS 89.19
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 11.43
    rCSI 20.18%
    PRS 63.05
  • VIP GABAergic cortical interneuron CL4023016
    CSI 11.4
    rCSI 13.62%
    PRS 63.79
  • L6b glutamatergic cortical neuron CL4023038
    CSI 10.71
    rCSI 33.46%
    PRS 65.32
  • intermediate monocyte CL0002393
    CSI 10.49
    rCSI 15.83%
    PRS 86.09
  • glutamatergic neuron CL0000679
    CSI 9.65
    rCSI 19.83%
    PRS 68.63
  • kidney connecting tubule epithelial cell CL1000768
    CSI 8.95
    rCSI 22.69%
    PRS 71.92
  • hematopoietic precursor cell CL0008001
    CSI 8.83
    rCSI 9.09%
    PRS 91.46
  • myeloid leukocyte CL0000766
    CSI 8.2
    rCSI 7.57%
    PRS 82.7
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 8.02
    rCSI 25.1%
    PRS 67.66
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 7.54
    rCSI 27.13%
    PRS 61.6
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 7.44
    rCSI 28.13%
    PRS 64.21
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 7.4
    rCSI 9.21%
    PRS 61.55
  • ionocyte CL0005006
    CSI 7.08
    rCSI 7.59%
    PRS 82.66
  • lung ciliated cell CL1000271
    CSI 7.02
    rCSI 8.12%
    PRS 73.7
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 7.02
    rCSI 16.88%
    PRS 92.58
  • epithelial cell of lower respiratory tract CL0002632
    CSI 6.85
    rCSI 5.31%
    PRS 84.89
  • ependymal cell CL0000065
    CSI 6.76
    rCSI 13.72%
    PRS 60.09
  • retinal ganglion cell CL0000740
    CSI 6.71
    rCSI 14.83%
    PRS 67.28
  • Schwann cell CL0002573
    CSI 6.68
    rCSI 19%
    PRS 77.02
  • blood vessel smooth muscle cell CL0019018
    CSI 6.43
    rCSI 52.29%
    PRS 75.76
  • enteroendocrine cell CL0000164
    CSI 6.24
    rCSI 8.53%
    PRS 80.81
  • intestinal tuft cell CL0019032
    CSI 6.13
    rCSI 9.37%
    PRS 84.66
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 5.56
    rCSI 32.76%
    PRS 64.28
  • bronchus fibroblast of lung CL2000093
    CSI 5.47
    rCSI 4.44%
    PRS 80.53
  • pancreatic A cell CL0000171
    CSI 5.41
    rCSI 5.67%
    PRS 84.25
  • cardiac endothelial cell CL0010008
    CSI 5.23
    rCSI 21.09%
    PRS 81.14
  • interstitial cell of Cajal CL0002088
    CSI 5.2
    rCSI 6.62%
    PRS 86.06
  • adipocyte CL0000136
    CSI 4.99
    rCSI 6.4%
    PRS 71.5
  • GABAergic amacrine cell CL4030027
    CSI 4.79
    rCSI 16.41%
    PRS 67.5
  • alveolar type 1 fibroblast cell CL4028004
    CSI 4.78
    rCSI 5.24%
    PRS 83.09
  • basal cell CL0000646
    CSI 4.74
    rCSI 6.34%
    PRS 79.5
  • conjunctival epithelial cell CL1000432
    CSI 4.73
    rCSI 7.23%
    PRS 81.33
  • club cell CL0000158
    CSI 4.63
    rCSI 6.79%
    PRS 75.87
  • stem cell CL0000034
    CSI 4.61
    rCSI 4.44%
    PRS 74.79
  • skin fibroblast CL0002620
    CSI 4.51
    rCSI 3.89%
    PRS 81.96
  • sst GABAergic cortical interneuron CL4023017
    CSI 4.3
    rCSI 5.54%
    PRS 64.83
  • pulmonary alveolar type 2 cell CL0002063
    CSI 4.28
    rCSI 6.64%
    PRS 84.94
  • vascular leptomeningeal cell CL4023051
    CSI 4.25
    rCSI 7.45%
    PRS 75.59
  • epithelial cell CL0000066
    CSI 4.16
    rCSI 6.4%
    PRS 70.47
  • microglial cell CL0000129
    CSI 4.13
    rCSI 16.64%
    PRS 82.91
  • regulatory T cell CL0000815
    CSI 4.12
    rCSI 4.78%
    PRS 80.99
  • acinar cell CL0000622
    CSI 4.1
    rCSI 6.01%
    PRS 89.83
  • multi-ciliated epithelial cell CL0005012
    CSI 3.89
    rCSI 3.89%
    PRS 75.13
  • tracheobronchial smooth muscle cell CL0019019
    CSI 3.85
    rCSI 6.79%
    PRS 86.07
  • inhibitory interneuron CL0000498
    CSI 3.85
    rCSI 8.88%
    PRS 69.44
  • cerebral cortex endothelial cell CL1001602
    CSI 3.78
    rCSI 6.55%
    PRS 73.09
  • diffuse bipolar 3a cell CL4033029
    CSI 3.64
    rCSI 24.76%
    PRS 73.88
  • GABAergic neuron CL0000617
    CSI 3.63
    rCSI 12.15%
    PRS 65.33
  • elicited macrophage CL0000861
    CSI 3.54
    rCSI 3.25%
    PRS 88.28
  • retinal blood vessel endothelial cell CL0002585
    CSI 3.47
    rCSI 5.54%
    PRS 84.82
  • retinal bipolar neuron CL0000748
    CSI 3.46
    rCSI 6.48%
    PRS 69.83
  • respiratory basal cell CL0002633
    CSI 3.36
    rCSI 3.48%
    PRS 84.94
  • myeloid cell CL0000763
    CSI 3.35
    rCSI 13.79%
    PRS 88.12
  • Mueller cell CL0000636
    CSI 3.33
    rCSI 7.59%
    PRS 72.9
  • smooth muscle cell CL0000192
    CSI 3.3
    rCSI 7.88%
    PRS 77.32
  • myoepithelial cell CL0000185
    CSI 3.29
    rCSI 8.32%
    PRS 86.01
  • stromal cell of ovary CL0002132
    CSI 3.23
    rCSI 8.88%
    PRS 87.53
  • lung macrophage CL1001603
    CSI 3.16
    rCSI 7.07%
    PRS 87.85
  • epithelial cell of lung CL0000082
    CSI 3.16
    rCSI 2.62%
    PRS 82.04
  • BEST4+ enteroycte CL4030026
    CSI 3.15
    rCSI 3.91%
    PRS 81.94
  • amacrine cell CL0000561
    CSI 3.05
    rCSI 8.84%
    PRS 71.02
  • lung pericyte CL0009089
    CSI 2.98
    rCSI 7.87%
    PRS 87.45
  • vascular associated smooth muscle cell CL0000359
    CSI 2.97
    rCSI 9.64%
    PRS 79.33
  • alveolar adventitial fibroblast CL4028006
    CSI 2.93
    rCSI 4.62%
    PRS 82.63
  • pulmonary alveolar type 1 cell CL0002062
    CSI 2.86
    rCSI 16.47%
    PRS 77.84
  • mesodermal cell CL0000222
    CSI 2.85
    rCSI 3.42%
    PRS 79.26
  • ON parasol ganglion cell CL4033052
    CSI 2.83
    rCSI 40.21%
    PRS 72.49
  • respiratory hillock cell CL4030023
    CSI 2.71
    rCSI 4.83%
    PRS 89.14
  • keratocyte CL0002363
    CSI 2.67
    rCSI 6.41%
    PRS 84
  • pancreatic ductal cell CL0002079
    CSI 2.66
    rCSI 5.17%
    PRS 84.03
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 2.62
    rCSI 3.12%
    PRS 94.23
  • goblet cell CL0000160
    CSI 2.59
    rCSI 2.45%
    PRS 79.71
  • neural cell CL0002319
    CSI 2.38
    rCSI 8.97%
    PRS 64.35
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 2.36
    rCSI 2.86%
    PRS 88.16
  • retinal pigment epithelial cell CL0002586
    CSI 2.26
    rCSI 4.49%
    PRS 76.96
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 2.24
    rCSI 6.05%
    PRS 85.44
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 2.17
    rCSI 4.32%
    PRS 91.62
  • retinal cone cell CL0000573
    CSI 2.13
    rCSI 3.43%
    PRS 71.57
  • ciliated cell CL0000064
    CSI 2.05
    rCSI 3.33%
    PRS 76.09
  • ON midget ganglion cell CL4033046
    CSI 2.03
    rCSI 41.27%
    PRS 71.1
  • nasal mucosa goblet cell CL0002480
    CSI 2
    rCSI 2.32%
    PRS 84.78
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 1.96
    rCSI 4.47%
    PRS 74.83
  • OFF midget ganglion cell CL4033047
    CSI 1.95
    rCSI 39.64%
    PRS 72.24
  • glycinergic amacrine cell CL4030028
    CSI 1.81
    rCSI 4.72%
    PRS 75.87
  • alveolar macrophage CL0000583
    CSI 1.78
    rCSI 2.93%
    PRS 84.73
  • mesenchymal stem cell of adipose tissue CL0002570
    CSI 1.77
    rCSI 9.89%
    PRS 84.06
  • myeloid dendritic cell CL0000782
    CSI 1.61
    rCSI 2.33%
    PRS 92.51
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.44
    rCSI 3.18%
    PRS 88.03
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 1.38
    rCSI 2.35%
    PRS 92.43
  • tissue-resident macrophage CL0000864
    CSI 1.36
    rCSI 6.38%
    PRS 91.29
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.32
    rCSI 3.83%
    PRS 80.57
  • skeletal muscle satellite stem cell CL0008011
    CSI 1.27
    rCSI 5.64%
    PRS 90.32
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.25
    rCSI 3.5%
    PRS 87.51
  • vein endothelial cell of respiratory system CL4033008
    CSI 0.3
    rCSI 2.3%
    PRS 87.5%
  • respiratory goblet cell CL0002370
    CSI 0.3
    rCSI 3.8%
    PRS 88.6%
  • medium spiny neuron CL1001474
    CSI 0.4
    rCSI 3.3%
    PRS 69.5%
  • eye photoreceptor cell CL0000287
    CSI 0.6
    rCSI 6.8%
    PRS 88.5%
  • mesenchymal stem cell CL0000134
    CSI 0.8
    rCSI 8.4%
    PRS 86.3%
  • regular ventricular cardiac myocyte CL0002131
    CSI 0.8
    rCSI 4.9%
    PRS 73.2%
  • bronchial goblet cell CL1000312
    CSI 1.1
    rCSI 4.3%
    PRS 88.6%
  • invaginating midget bipolar cell CL4033034
    CSI 1.2
    rCSI 7.3%
    PRS 72.8%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.3
    rCSI 3.5%
    PRS 87.5%
  • skeletal muscle satellite stem cell CL0008011
    CSI 1.3
    rCSI 5.6%
    PRS 90.3%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.3
    rCSI 3.8%
    PRS 80.6%
  • tissue-resident macrophage CL0000864
    CSI 1.4
    rCSI 6.4%
    PRS 91.3%
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 1.4
    rCSI 2.4%
    PRS 92.4%
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.4
    rCSI 3.2%
    PRS 88.0%
  • myeloid dendritic cell CL0000782
    CSI 1.6
    rCSI 2.3%
    PRS 92.5%
  • mesenchymal stem cell of adipose tissue CL0002570
    CSI 1.8
    rCSI 9.9%
    PRS 84.1%
  • alveolar macrophage CL0000583
    CSI 1.8
    rCSI 2.9%
    PRS 84.7%
  • glycinergic amacrine cell CL4030028
    CSI 1.8
    rCSI 4.7%
    PRS 75.9%
  • OFF midget ganglion cell CL4033047
    CSI 2.0
    rCSI 39.6%
    PRS 72.2%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 2.0
    rCSI 4.5%
    PRS 74.8%
  • nasal mucosa goblet cell CL0002480
    CSI 2.0
    rCSI 2.3%
    PRS 84.8%
  • ON midget ganglion cell CL4033046
    CSI 2.0
    rCSI 41.3%
    PRS 71.1%
  • ciliated cell CL0000064
    CSI 2.1
    rCSI 3.3%
    PRS 76.1%
  • retinal cone cell CL0000573
    CSI 2.1
    rCSI 3.4%
    PRS 71.6%
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 2.2
    rCSI 4.3%
    PRS 91.6%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 2.2
    rCSI 6.1%
    PRS 85.4%
  • retinal pigment epithelial cell CL0002586
    CSI 2.3
    rCSI 4.5%
    PRS 77.0%
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 2.4
    rCSI 2.9%
    PRS 88.2%
  • neural cell CL0002319
    CSI 2.4
    rCSI 9.0%
    PRS 64.4%
  • goblet cell CL0000160
    CSI 2.6
    rCSI 2.5%
    PRS 79.7%
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 2.6
    rCSI 3.1%
    PRS 94.2%
  • pancreatic ductal cell CL0002079
    CSI 2.7
    rCSI 5.2%
    PRS 84.0%
  • keratocyte CL0002363
    CSI 2.7
    rCSI 6.4%
    PRS 84.0%
  • respiratory hillock cell CL4030023
    CSI 2.7
    rCSI 4.8%
    PRS 89.1%
  • ON parasol ganglion cell CL4033052
    CSI 2.8
    rCSI 40.2%
    PRS 72.5%
  • mesodermal cell CL0000222
    CSI 2.9
    rCSI 3.4%
    PRS 79.3%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 2.9
    rCSI 16.5%
    PRS 77.8%
  • alveolar adventitial fibroblast CL4028006
    CSI 2.9
    rCSI 4.6%
    PRS 82.6%
  • vascular associated smooth muscle cell CL0000359
    CSI 3.0
    rCSI 9.6%
    PRS 79.3%
  • lung pericyte CL0009089
    CSI 3.0
    rCSI 7.9%
    PRS 87.5%
  • amacrine cell CL0000561
    CSI 3.1
    rCSI 8.8%
    PRS 71.0%
  • BEST4+ enteroycte CL4030026
    CSI 3.2
    rCSI 3.9%
    PRS 81.9%
  • epithelial cell of lung CL0000082
    CSI 3.2
    rCSI 2.6%
    PRS 82.0%
  • lung macrophage CL1001603
    CSI 3.2
    rCSI 7.1%
    PRS 87.9%
  • stromal cell of ovary CL0002132
    CSI 3.2
    rCSI 8.9%
    PRS 87.5%
  • myoepithelial cell CL0000185
    CSI 3.3
    rCSI 8.3%
    PRS 86.0%
  • smooth muscle cell CL0000192
    CSI 3.3
    rCSI 7.9%
    PRS 77.3%
  • Mueller cell CL0000636
    CSI 3.3
    rCSI 7.6%
    PRS 72.9%
  • myeloid cell CL0000763
    CSI 3.4
    rCSI 13.8%
    PRS 88.1%
  • respiratory basal cell CL0002633
    CSI 3.4
    rCSI 3.5%
    PRS 84.9%
  • retinal bipolar neuron CL0000748
    CSI 3.5
    rCSI 6.5%
    PRS 69.8%
  • retinal blood vessel endothelial cell CL0002585
    CSI 3.5
    rCSI 5.5%
    PRS 84.8%
  • elicited macrophage CL0000861
    CSI 3.5
    rCSI 3.3%
    PRS 88.3%
  • GABAergic neuron CL0000617
    CSI 3.6
    rCSI 12.2%
    PRS 65.3%
  • diffuse bipolar 3a cell CL4033029
    CSI 3.6
    rCSI 24.8%
    PRS 73.9%
  • cerebral cortex endothelial cell CL1001602
    CSI 3.8
    rCSI 6.6%
    PRS 73.1%
  • inhibitory interneuron CL0000498
    CSI 3.9
    rCSI 8.9%
    PRS 69.4%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 3.9
    rCSI 6.8%
    PRS 86.1%
  • multi-ciliated epithelial cell CL0005012
    CSI 3.9
    rCSI 3.9%
    PRS 75.1%
  • acinar cell CL0000622
    CSI 4.1
    rCSI 6.0%
    PRS 89.8%
  • regulatory T cell CL0000815
    CSI 4.1
    rCSI 4.8%
    PRS 81.0%
  • microglial cell CL0000129
    CSI 4.1
    rCSI 16.6%
    PRS 82.9%
  • epithelial cell CL0000066
    CSI 4.2
    rCSI 6.4%
    PRS 70.5%
  • vascular leptomeningeal cell CL4023051
    CSI 4.3
    rCSI 7.5%
    PRS 75.6%
  • pulmonary alveolar type 2 cell CL0002063
    CSI 4.3
    rCSI 6.6%
    PRS 84.9%
  • sst GABAergic cortical interneuron CL4023017
    CSI 4.3
    rCSI 5.5%
    PRS 64.8%
  • skin fibroblast CL0002620
    CSI 4.5
    rCSI 3.9%
    PRS 82.0%
  • stem cell CL0000034
    CSI 4.6
    rCSI 4.4%
    PRS 74.8%
  • club cell CL0000158
    CSI 4.6
    rCSI 6.8%
    PRS 75.9%
  • conjunctival epithelial cell CL1000432
    CSI 4.7
    rCSI 7.2%
    PRS 81.3%
  • basal cell CL0000646
    CSI 4.7
    rCSI 6.3%
    PRS 79.5%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 4.8
    rCSI 5.2%
    PRS 83.1%
  • GABAergic amacrine cell CL4030027
    CSI 4.8
    rCSI 16.4%
    PRS 67.5%
  • adipocyte CL0000136
    CSI 5.0
    rCSI 6.4%
    PRS 71.5%
  • interstitial cell of Cajal CL0002088
    CSI 5.2
    rCSI 6.6%
    PRS 86.1%
  • cardiac endothelial cell CL0010008
    CSI 5.2
    rCSI 21.1%
    PRS 81.1%
  • pancreatic A cell CL0000171
    CSI 5.4
    rCSI 5.7%
    PRS 84.3%
  • bronchus fibroblast of lung CL2000093
    CSI 5.5
    rCSI 4.4%
    PRS 80.5%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 5.6
    rCSI 32.8%
    PRS 64.3%
  • intestinal tuft cell CL0019032
    CSI 6.1
    rCSI 9.4%
    PRS 84.7%
  • enteroendocrine cell CL0000164
    CSI 6.2
    rCSI 8.5%
    PRS 80.8%
  • blood vessel smooth muscle cell CL0019018
    CSI 6.4
    rCSI 52.3%
    PRS 75.8%
  • Schwann cell CL0002573
    CSI 6.7
    rCSI 19.0%
    PRS 77.0%
  • retinal ganglion cell CL0000740
    CSI 6.7
    rCSI 14.8%
    PRS 67.3%
  • ependymal cell CL0000065
    CSI 6.8
    rCSI 13.7%
    PRS 60.1%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 6.9
    rCSI 5.3%
    PRS 84.9%
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 7.0
    rCSI 16.9%
    PRS 92.6%
  • lung ciliated cell CL1000271
    CSI 7.0
    rCSI 8.1%
    PRS 73.7%
  • ionocyte CL0005006
    CSI 7.1
    rCSI 7.6%
    PRS 82.7%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 7.4
    rCSI 9.2%
    PRS 61.6%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 7.4
    rCSI 28.1%
    PRS 64.2%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 7.5
    rCSI 27.1%
    PRS 61.6%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 8.0
    rCSI 25.1%
    PRS 67.7%
  • myeloid leukocyte CL0000766
    CSI 8.2
    rCSI 7.6%
    PRS 82.7%
  • hematopoietic precursor cell CL0008001
    CSI 8.8
    rCSI 9.1%
    PRS 91.5%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 9.0
    rCSI 22.7%
    PRS 71.9%
  • glutamatergic neuron CL0000679
    CSI 9.7
    rCSI 19.8%
    PRS 68.6%
  • intermediate monocyte CL0002393
    CSI 10.5
    rCSI 15.8%
    PRS 86.1%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 10.7
    rCSI 33.5%
    PRS 65.3%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 11.4
    rCSI 13.6%
    PRS 63.8%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [PRRC2B](/details-gene/84726) (proline rich coiled-coil 2B) is a protein-coding gene located on chromosome 9q34.13. Functional annotations suggest it plays a role in macromolecular interactions, with evidence for both '[protein binding](/details-go/GO:0005515)' and '[Rna binding](/details-go/GO:0003723)'. Its involvement in the biological process of '[cell differentiation](/details-go/GO:0030154)' is consistent with its expression profile. **Overall**, [PRRC2B](/details-gene/84726) shows significant expression in a diverse array of specialized cell types, including neuronal, endocrine, and muscle cells, indicating a potential role in maintaining the function of terminally differentiated tissues. The gene was identified and characterized as part of large-scale cDNA sequencing and proteomic projects ([Link](https://doi.org/10.1038/ng1285), [Link](https://doi.org/10.1016/j.cell.2006.09.026)). ## Cellular Roles and Expression Landscape The expression pattern of [PRRC2B](/details-gene/84726) suggests a pleiotropic function across multiple, distinct biological systems rather than a role as a specific lineage marker. Its highest significance is observed in the [lung neuroendocrine cell](/details-cell/CL1000223) (CSI: 22.69), pointing towards a potential role in neurosecretory functions. A prominent feature of its expression is its high significance across various neuronal subtypes. This includes high CSI values in both inhibitory interneurons, such as [sncg GABAergic cortical interneuron](/details-cell/CL4023015) and [lamp5 GABAergic cortical interneuron](/details-cell/CL4023011), and excitatory neurons like [L2/3-6 intratelencephalic projecting glutamatergic neuron](/details-cell/CL4023040). This broad expression within the central nervous system suggests a fundamental role in neuronal biology. Beyond the nervous system, [PRRC2B](/details-gene/84726) is also highly significant in secretory and contractile cells, including [mucus secreting cell](/details-cell/CL0000319) and [cardiac muscle cell](/details-cell/CL0000746). Its expression extends to the vascular system in [pulmonary artery endothelial cell](/details-cell/CL1001568) and into the hematopoietic system, with notable significance in [intermediate monocyte](/details-cell/CL0002393), [hematopoietic precursor cell](/details-cell/CL0008001), and [myeloid leukocyte](/details-cell/CL0000766). This diverse expression landscape points to a role in core cellular processes common to these specialized cell types. ## Pathways and Molecular Function The molecular functions of [PRRC2B](/details-gene/84726) are primarily annotated as '[protein binding](/details-go/GO:0005515)' and '[Rna binding](/details-go/GO:0003723)'. This dual-binding capability suggests that it may function as an adapter or scaffold protein, potentially mediating the formation of ribonucleoprotein (RNP) complexes. Such complexes are crucial for post-transcriptional gene regulation, including mRNA splicing, stability, localization, and translation. Its association with the biological process of '[cell differentiation](/details-go/GO:0030154)' aligns with its expression in a wide range of terminally differentiated cells (e.g., neurons, muscle cells) as well as in [hematopoietic precursor cell](/details-cell/CL0008001). This suggests [PRRC2B](/details-gene/84726) could be involved in the regulatory networks that establish and maintain specialized cellular identities. Although specific pathways have not been elucidated, its function likely pertains to the fine-tuning of gene expression programs required for these diverse cell fates. ## Research Directions The broad yet significant expression of [PRRC2B](/details-gene/84726) in functionally diverse, terminally differentiated cells, combined with its RNA-binding capacity, opens several avenues for future research. **Proposed Hypotheses:** 1. Given its high expression in metabolically active cells with complex morphologies like [glutamatergic neuron](/details-cell/CL0000679) and [cardiac muscle cell](/details-cell/CL0000746), [PRRC2B](/details-gene/84726) may function as an RNA-binding protein that regulates the subcellular localization and/or translational efficiency of key mRNAs essential for maintaining neuronal synaptic function or muscle contractility. 2. The significant expression of [PRRC2B](/details-gene/84726) in [hematopoietic precursor cell](/details-cell/CL0008001) and its subsequent expression in differentiated myeloid cells like [intermediate monocyte](/details-cell/CL0002393) suggests that it plays a role in myeloid lineage commitment. It may act by binding to and stabilizing the transcripts of master regulators of myelopoiesis. **Experimental Approach:** To test the first hypothesis regarding its role in neuronal mRNA regulation, an RNA immunoprecipitation followed by sequencing (RIP-Seq) experiment could be performed using human iPSC-derived neurons. This would identify the specific mRNA transcripts that directly bind to the PRRC2B protein. Following identification of these targets, knockdown of [PRRC2B](/details-gene/84726) via CRISPR interference (CRISPRi) could be coupled with fluorescence in situ hybridization (FISH) to determine if the subcellular localization of target mRNAs (e.g., in dendrites or axons) is disrupted. **Therapeutic Potential:** The widespread expression of [PRRC2B](/details-gene/84726) across multiple critical tissues, including the brain, heart, and immune system, suggests that it is a poor candidate for systemic therapeutic intervention. Systemic inhibition would carry a high risk of on-target toxicity in healthy tissues. Therefore, its potential as a drug target is low, unless a disease-specific role is identified where its activity is uniquely dysregulated, or if a highly targeted delivery system (e.g., AAV-based gene therapy for a specific neuronal population) could be developed.

Genular Protein ID: 2349912190

Symbol: PRC2B_HUMAN

Name: Protein PRRC2B

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15164053

Title: DNA sequence and analysis of human chromosome 9.

PubMed ID: 15164053

DOI: 10.1038/nature02465

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 9628581

Title: Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

PubMed ID: 9628581

DOI: 10.1093/dnares/5.1.31

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 18220336

Title: Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.

PubMed ID: 18220336

DOI: 10.1021/pr0705441

PubMed ID: 18691976

Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.

PubMed ID: 18691976

DOI: 10.1016/j.molcel.2008.07.007

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 18318008

Title: Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography.

PubMed ID: 18318008

DOI: 10.1002/pmic.200700884

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25772364

Title: SUMO-2 orchestrates chromatin modifiers in response to DNA damage.

PubMed ID: 25772364

DOI: 10.1016/j.celrep.2015.02.033

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

Sequence Information:

  • Length: 2229
  • Mass: 242967
  • Checksum: 0F5F13DAC0217A6D
  • Sequence:
  • MSDRLGQITK GKDGKSKYST LSLFDKYKGK SVDAIRSSVI PRHGLQSLGK VAAARRMPPP 
    ANLPSLKSEN KGNDPNIVIV PKDGTGWANK QDQQDPKSSS ATASQPPESL PQPGLQKSVS 
    NLQKPTQSIS QENTNSVPGG PKSWAQLNGK PVGHEGGLRG SSRLLSFSPE EFPTLKAAGG 
    QDKAGKEKGV LDLSYGPGPS LRPQNVTSWR EGGGRHIISA TSLSTSPTEL GSRNSSTGDG 
    APSSACTSDS KDPSLRPAQP VRKGASQFMG NVYHPPTYHD MLPAFMCSPK SSENQGTVER 
    GSFPLPQLRL EPRVPFRQFQ MNDQDGKENR LGLSRPLRPL RQLVERAPRP TIINAENLKG 
    LDDLDADADD GWAGLHEEVD YSEKLKFSDD EEEEEVVKDG RPKWNSWDPR RQRQLSMSSA 
    DSADAKRTRE EGKDWAEAVG ASRVVRKAPD PQPPPRKLHG WAPGPDYQKS SMGSMFRQQS 
    IEDKEDKPPP RQKFIQSEMS EAVERARKRR EEEERRAREE RLAACAAKLK QLDQKCKQAR 
    KAGEARKQAE KEVPWSPSAE KASPQENGPA VHKGSPEFPA QETPTTFPEE APTVSPAVAQ 
    SNSSEEEARE AGSPAQEFKY QKSLPPRFQR QQQQQQQEQL YKMQHWQPVY PPPSHPQRTF 
    YPHHPQMLGF DPRWMMMPSY MDPRITPTRT PVDFYPSALH PSGLMKPMMP QESLNGTGCR 
    SEDQNCVPPL QERKVTPIDS PPVWSPEGYM ALQSKGYPLP HPKSSDTLAM DMRVRNESSF 
    SASLGRAGGV SAQRDLFEER GEEYLSAFDK KAQADFDSCI SSQRIGQELL FPPQENVQDA 
    GAPGGHTQNL RCSPLEPDFV PDEKKPECGS WDVSHQPETA DTAHGVERET PREGTAFNIS 
    SWDKNGSPNK QPSSEPEWTP EPRSSSSQHP EQTGRTRRSG PIKKPVLKAL KVEDKEKELE 
    KIKQELGEES TRLAKEKEQS PTAEKDEDEE NDASLANSST TTLEDKGPGH ATFGREATKF 
    EEEEKPDKAW EARPPRESSD VPPMKRNNWI FIDEEQAFGV RGQARGRGRG FREFTFRGRP 
    AGGNGSGLCG GGVLGARSIY CSSQRSGRGR GLREFARPED CPRAKPRRRV ASETHSEGSE 
    YEELPKRRRQ RGSENGNEGS LLEREESTLK KGDCRDSWRS NKGCSEDHSG LDAKSRGPRA 
    FGRALPPRLS NCGYGRRTFV SKESPHWQSK SPGSSWQEYG PSDTCGSRRP TDRDYVPDSY 
    RHPDAFGGRG FEDSRAEDKR SFFQDEHVAD SENAENRPFR RRRPPRQDKP PRFRRLRQER 
    ESLGLWGPEE EPHLLAGQWP GRPKLCSGDK SGTVGRRSPE LSYQNSSDHA NEEWETASES 
    SDFSERRERR EGPGSEPDSQ VDGGLSGASL GEKKELAKRS FSSQRPVVDR QSRKLEPGGF 
    GEKPVRPGGG DTSPRYESQQ NGTPLKVKRS PDEALPGGLS GCSSGSGHSP YALERAAHAS 
    ADLPEASSKK AEKEAKLAAP RAGEQGEAMK QFDLNYGSAI IENCGSSPGE ESEVGSMVGE 
    GFIEVLTKKQ RRLLEEERRK KEQAVQVPVK GRGLSSRIPP RFAKKQNNLC LEQGDVTVPG 
    SSLGTEIWES SSQALPVQAP ANDSWRKAVT AFSSTETGSA EQGFKSSQGD SGVDLSAESR 
    ESSATSSQRS SPYGTLKPEE MSGPGLAEPK ADSHKEQAPK PSEQKDSEQG SGQSKEHRPG 
    PIGNERSLKN RKGSEGAERL QGAVVPPVNG VEIHVDSVLP VPPIEFGVSP KDSDFSLPPG 
    SASGPTGSPV VKLQDALASN AGLTQSIPIL RRDHHIQRAI GLSPMSFPTA DLTLKMESAR 
    KAWENSPSLP EQSSPGGAGS GIQPPSSVGA SSGVNYSSFG GVSMPPMPVA SVAPSASMPG 
    SHLPPLYLDG HVFASQPRLV PQTIPQQQSY QQAAAAQQIP ISLHTSLQAQ AQLGLRGGLP 
    VSQSQEIFSS LQPFRSQVYM HPSLSPPSTM ILSGGTALKP PYSAFPGMQP LEMVKPQSGS 
    PYQPMSGNQA LVYEGQLSQA AGLGASQMLD SQLPQLTMPL PRYGSGQQPL ILPQSIQLPP 
    GQSLSVGAPR RIPPPGSQPP VLNTSREPSQ MEMKGFHFAD SKQNVPSGGP VPSPQTYRPS 
    SASPSGKPSG SAVNMGSVQG HYVQQAKQRV DEKPSLGAVK LQEAPSAASQ MKRTGAIKPR 
    AVKVEESKA

Genular Protein ID: 821692677

Symbol: Q9BU62_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 339
  • Mass: 36378
  • Checksum: F6DF9BCBDDCEAC14
  • Sequence:
  • MSDRLGQITK GKDGKSKYST LSLFDKYKGK SVDAIRSSVI PRHGLQSLGK VAAARRMPPP 
    ANLPSLKSEN KGNDPNIVIV PKDGTGWANK QDQQDPKSSS ATASQPPESL PQPGLQKSVS 
    NLQKPTQSIS QENTNSVPGG PKSWAQLNGK PVGHEGGLRG SSRLLSFSPE EFPTLKAAGG 
    QDKAGKEKGV LDLSYGPGPS LRPQNVTSWR EGGGRHIISA TSLSTSPTEL GSRNSSTGDG 
    APSSACTSDS KDPSLRPAQP VRKGASQFMG NVYHPPTYHD MLPAFMCSPK SSENQGTVER 
    GSFPLPQLRL EPRVPFRQFQ MNDQDWNYGA RLVNMTFNE