Details for: PSME4

Gene ID: 23198

Symbol: PSME4

Ensembl ID: ENSG00000068878

Description: proteasome activator subunit 4

Associated with

Cells (max top 100)

(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 2.76
    Marker Score: 6,912
  • Cell Name: regular atrial cardiac myocyte (CL0002129)
    Fold Change: 2.62
    Marker Score: 9,305
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 2.56
    Marker Score: 5,625
  • Cell Name: regular ventricular cardiac myocyte (CL0002131)
    Fold Change: 2.54
    Marker Score: 56,697
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 2.28
    Marker Score: 9,534
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: 2.21
    Marker Score: 697
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: 2.17
    Marker Score: 1,264
  • Cell Name: corneal epithelial cell (CL0000575)
    Fold Change: 2.15
    Marker Score: 2,379
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.14
    Marker Score: 2,254
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 2.04
    Marker Score: 43,491
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 1.99
    Marker Score: 582
  • Cell Name: renal alpha-intercalated cell (CL0005011)
    Fold Change: 1.89
    Marker Score: 996
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 1.87
    Marker Score: 1,992
  • Cell Name: luminal cell of prostate epithelium (CL0002340)
    Fold Change: 1.85
    Marker Score: 1,076
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 1.84
    Marker Score: 2,228
  • Cell Name: epithelial cell of prostate (CL0002231)
    Fold Change: 1.83
    Marker Score: 1,271
  • Cell Name: lung goblet cell (CL1000143)
    Fold Change: 1.83
    Marker Score: 527
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 1.83
    Marker Score: 67,330
  • Cell Name: neuron (CL0000540)
    Fold Change: 1.82
    Marker Score: 7,412
  • Cell Name: oligodendrocyte (CL0000128)
    Fold Change: 1.82
    Marker Score: 4,348
  • Cell Name: basal epithelial cell of prostatic duct (CL0002236)
    Fold Change: 1.81
    Marker Score: 1,607
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 1.8
    Marker Score: 10,654
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 1.78
    Marker Score: 2,021
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 1.78
    Marker Score: 2,396
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 1.77
    Marker Score: 1,527
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 1.75
    Marker Score: 66,482
  • Cell Name: vascular leptomeningeal cell (CL4023051)
    Fold Change: 1.74
    Marker Score: 2,005
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.74
    Marker Score: 107,119
  • Cell Name: pyramidal neuron (CL0000598)
    Fold Change: 1.72
    Marker Score: 2,889
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 1.7
    Marker Score: 2,501
  • Cell Name: A2 amacrine cell (CL0004219)
    Fold Change: 1.69
    Marker Score: 535
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 1.67
    Marker Score: 976
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 1.66
    Marker Score: 822
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 1.65
    Marker Score: 17,064
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: 1.64
    Marker Score: 14,062
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: 1.64
    Marker Score: 15,548
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 1.58
    Marker Score: 6,547
  • Cell Name: fat cell (CL0000136)
    Fold Change: 1.58
    Marker Score: 881
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: 1.57
    Marker Score: 2,275
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 1.55
    Marker Score: 2,984
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 1.55
    Marker Score: 23,190
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: 1.55
    Marker Score: 11,849
  • Cell Name: central nervous system macrophage (CL0000878)
    Fold Change: 1.54
    Marker Score: 764
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 1.54
    Marker Score: 14,454
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 1.53
    Marker Score: 30,484
  • Cell Name: OFF retinal ganglion cell (CL4023033)
    Fold Change: 1.53
    Marker Score: 642
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: 1.53
    Marker Score: 2,362
  • Cell Name: alveolar type 2 fibroblast cell (CL4028006)
    Fold Change: 1.53
    Marker Score: 850
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 1.47
    Marker Score: 7,238
  • Cell Name: mesangial cell (CL0000650)
    Fold Change: 1.47
    Marker Score: 1,778
  • Cell Name: renal principal cell (CL0005009)
    Fold Change: 1.47
    Marker Score: 1,131
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: 1.47
    Marker Score: 499
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 1.45
    Marker Score: 1,260
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 1.45
    Marker Score: 5,619
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: 1.44
    Marker Score: 1,138
  • Cell Name: epicardial adipocyte (CL1000309)
    Fold Change: 1.41
    Marker Score: 683
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 1.37
    Marker Score: 1,479
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: 1.37
    Marker Score: 815
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: 1.34
    Marker Score: 8,644
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 1.34
    Marker Score: 3,269
  • Cell Name: lymphocyte (CL0000542)
    Fold Change: 1.34
    Marker Score: 675
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 1.33
    Marker Score: 23,620
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 1.27
    Marker Score: 20,462
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 1.27
    Marker Score: 43,315
  • Cell Name: midzonal region hepatocyte (CL0019028)
    Fold Change: 1.24
    Marker Score: 5,369
  • Cell Name: hepatic stellate cell (CL0000632)
    Fold Change: 1.24
    Marker Score: 467
  • Cell Name: Unknown (CL0002371)
    Fold Change: 1.21
    Marker Score: 1,290
  • Cell Name: basal cell (CL0000646)
    Fold Change: 1.21
    Marker Score: 1,564
  • Cell Name: kidney connecting tubule epithelial cell (CL1000768)
    Fold Change: 1.2
    Marker Score: 1,705
  • Cell Name: innate lymphoid cell (CL0001065)
    Fold Change: 1.19
    Marker Score: 429
  • Cell Name: cholangiocyte (CL1000488)
    Fold Change: 1.19
    Marker Score: 445
  • Cell Name: periportal region hepatocyte (CL0019026)
    Fold Change: 1.19
    Marker Score: 6,396
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 1.19
    Marker Score: 2,705
  • Cell Name: ON retinal ganglion cell (CL4023032)
    Fold Change: 1.18
    Marker Score: 323
  • Cell Name: skeletal muscle fibroblast (CL0011027)
    Fold Change: 1.18
    Marker Score: 777
  • Cell Name: alveolar macrophage (CL0000583)
    Fold Change: 1.18
    Marker Score: 30,115
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: 1.16
    Marker Score: 5,381
  • Cell Name: podocyte (CL0000653)
    Fold Change: 1.16
    Marker Score: 429
  • Cell Name: renal interstitial pericyte (CL1001318)
    Fold Change: 1.16
    Marker Score: 1,105
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: 1.16
    Marker Score: 774
  • Cell Name: basal cell of epidermis (CL0002187)
    Fold Change: 1.15
    Marker Score: 504
  • Cell Name: lens fiber cell (CL0011004)
    Fold Change: 1.15
    Marker Score: 364
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 1.15
    Marker Score: 17,950
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: 1.15
    Marker Score: 2,032
  • Cell Name: papillary tips cell (CL1000597)
    Fold Change: 1.14
    Marker Score: 231
  • Cell Name: club cell (CL0000158)
    Fold Change: 1.13
    Marker Score: 1,316
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 1.13
    Marker Score: 3,870
  • Cell Name: smooth muscle cell of prostate (CL1000487)
    Fold Change: 1.12
    Marker Score: 285
  • Cell Name: duct epithelial cell (CL0000068)
    Fold Change: 1.11
    Marker Score: 520
  • Cell Name: syncytiotrophoblast cell (CL0000525)
    Fold Change: 1.1
    Marker Score: 907
  • Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
    Fold Change: 1.09
    Marker Score: 1,155
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 1.09
    Marker Score: 4,194
  • Cell Name: renal beta-intercalated cell (CL0002201)
    Fold Change: 1.09
    Marker Score: 344
  • Cell Name: cardiac neuron (CL0010022)
    Fold Change: 1.08
    Marker Score: 1,341
  • Cell Name: melanocyte (CL0000148)
    Fold Change: 1.07
    Marker Score: 432
  • Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
    Fold Change: 1.06
    Marker Score: 1,139
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: 1.05
    Marker Score: 969
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: 1.05
    Marker Score: 1,299
  • Cell Name: endocrine cell (CL0000163)
    Fold Change: 1.05
    Marker Score: 542
  • Cell Name: cerebellar granule cell precursor (CL0002362)
    Fold Change: 1.04
    Marker Score: 585

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** 1. **Proteasome subunit**: PSME4 is a subunit of the 20S proteasome, a large protein complex responsible for protein degradation. 2. **Ubiquitin-proteasome system**: PSME4 is part of the UPS, a highly conserved cellular machinery that regulates protein degradation and cellular homeostasis. 3. **Highly expressed**: PSME4 is highly expressed in multiple cell types, including skeletal muscle fibers, cardiac myocytes, and epithelial cells. 4. **Regulatory function**: PSME4 regulates protein degradation, cell cycle progression, and immune responses, highlighting its importance in maintaining cellular homeostasis. **Pathways and Functions** 1. **Protein degradation**: PSME4 is involved in the degradation of damaged or misfolded proteins, regulating cellular homeostasis. 2. **Cell cycle regulation**: PSME4 regulates cell cycle progression by degrading proteins involved in the cell cycle, such as cyclin D. 3. **Immune responses**: PSME4 plays a role in regulating immune responses by degrading proteins involved in the immune response, such as MHC class I molecules. 4. **Apoptosis regulation**: PSME4 regulates apoptosis by degrading proteins involved in the apoptotic pathway, such as Bcl-2. 5. **Signal transduction**: PSME4 is involved in signal transduction pathways, including the Wnt/β-catenin pathway and the Hedgehog pathway. **Clinical Significance** 1. **Cancer**: Alterations in PSME4 expression have been associated with cancer development and progression, highlighting its potential as a therapeutic target. 2. **Neurodegenerative diseases**: PSME4 has been implicated in neurodegenerative diseases, such as Alzheimer's disease and Parkinson's disease, where protein aggregation and degradation are disrupted. 3. **Infectious diseases**: PSME4 plays a role in regulating immune responses to infectious diseases, such as HIV and tuberculosis. 4. **Cardiac diseases**: PSME4 has been associated with cardiac diseases, such as heart failure and coronary artery disease, where protein degradation and cell cycle regulation are disrupted. In conclusion, PSME4 is a critical gene involved in regulating protein degradation, cell cycle progression, and immune responses. Its dysregulation has been implicated in various diseases, highlighting its potential as a therapeutic target. Further research is needed to fully understand the role of PSME4 in human disease and to develop effective therapeutic strategies.

Genular Protein ID: 1847118801

Symbol: PSME4_HUMAN

Name: Proteasome activator complex subunit 4

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7584044

Title: Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1.

PubMed ID: 7584044

DOI: 10.1093/dnares/1.5.223

PubMed ID: 12093752

Title: PA200, a nuclear proteasome activator involved in DNA repair.

PubMed ID: 12093752

DOI: 10.1093/emboj/cdf333

PubMed ID: 17323924

Title: Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.

PubMed ID: 17323924

DOI: 10.1021/bi061994u

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 18845680

Title: Role for proteasome activator PA200 and postglutamyl proteasome activity in genomic stability.

PubMed ID: 18845680

DOI: 10.1073/pnas.0803145105

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22550082

Title: The proteasome activator PA200 regulates tumor cell responsiveness to glutamine and resistance to ionizing radiation.

PubMed ID: 22550082

DOI: 10.1158/1541-7786.mcr-11-0493-t

PubMed ID: 23706739

Title: Acetylation-mediated proteasomal degradation of core histones during DNA repair and spermatogenesis.

PubMed ID: 23706739

DOI: 10.1016/j.cell.2013.04.032

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

Sequence Information:

  • Length: 1843
  • Mass: 211334
  • Checksum: 2D2C3A594E4FA4E7
  • Sequence:
  • MEPAERAGVG EPPEPGGRPE PGPRGFVPQK EIVYNKLLPY AERLDAESDL QLAQIKCNLG 
    RAVQLQELWP GGLFWTRKLS TYIRLYGRKF SKEDHVLFIK LLYELVSIPK LEISMMQGFA 
    RLLINLLKKK ELLSRADLEL PWRPLYDMVE RILYSKTEHL GLNWFPNSVE NILKTLVKSC 
    RPYFPADATA EMLEEWRPLM CPFDVTMQKA ITYFEIFLPT SLPPELHHKG FKLWFDELIG 
    LWVSVQNLPQ WEGQLVNLFA RLATDNIGYI DWDPYVPKIF TRILRSLNLP VGSSQVLVPR 
    FLTNAYDIGH AVIWITAMMG GPSKLVQKHL AGLFNSITSF YHPSNNGRWL NKLMKLLQRL 
    PNSVVRRLHR ERYKKPSWLT PVPDSHKLTD QDVTDFVQCI IQPVLLAMFS KTGSLEAAQA 
    LQNLALMRPE LVIPPVLERT YPALETLTEP HQLTATLSCV IGVARSLVSG GRWFPEGPTH 
    MLPLLMRALP GVDPNDFSKC MITFQFIATF STLVPLVDCS SVLQERNDLT EVERELCSAT 
    AEFEDFVLQF MDRCFGLIES STLEQTREET ETEKMTHLES LVELGLSSTF STILTQCSKE 
    IFMVALQKVF NFSTSHIFET RVAGRMVADM CRAAVKCCPE ESLKLFVPHC CSVITQLTMN 
    DDVLNDEELD KELLWNLQLL SEITRVDGRK LLLYREQLVK ILQRTLHLTC KQGYTLSCNL 
    LHHLLRSTTL IYPTEYCSVP GGFDKPPSEY FPIKDWGKPG DLWNLGIQWH VPSSEEVSFA 
    FYLLDSFLQP ELVKLQHCGD GKLEMSRDDI LQSLTIVHNC LIGSGNLLPP LKGEPVTNLV 
    PSMVSLEETK LYTGLEYDLS RENHREVIAT VIRKLLNHIL DNSEDDTKSL FLIIKIIGDL 
    LQFQGSHKHE FDSRWKSFNL VKKSMENRLH GKKQHIRALL IDRVMLQHEL RTLTVEGCEY 
    KKIHQDMIRD LLRLSTSSYS QVRNKAQQTF FAALGAYNFC CRDIIPLVLE FLRPDRQGVT 
    QQQFKGALYC LLGNHSGVCL ANLHDWDCIV QTWPAIVSSG LSQAMSLEKP SIVRLFDDLA 
    EKIHRQYETI GLDFTIPKSC VEIAELLQQS KNPSINQILL SPEKIKEGIK RQQEKNADAL 
    RNYENLVDTL LDGVEQRNLP WKFEHIGIGL LSLLLRDDRV LPLRAIRFFV ENLNHDAIVV 
    RKMAISAVAG ILKQLKRTHK KLTINPCEIS GCPKPTQIIA GDRPDNHWLH YDSKTIPRTK 
    KEWESSCFVE KTHWGYYTWP KNMVVYAGVE EQPKLGRSRE DMTEAEQIIF DHFSDPKFVE 
    QLITFLSLED RKGKDKFNPR RFCLFKGIFR NFDDAFLPVL KPHLEHLVAD SHESTQRCVA 
    EIIAGLIRGS KHWTFEKVEK LWELLCPLLR TALSNITVET YNDWGACIAT SCESRDPRKL 
    HWLFELLLES PLSGEGGSFV DACRLYVLQG GLAQQEWRVP ELLHRLLKYL EPKLTQVYKN 
    VRERIGSVLT YIFMIDVSLP NTTPTISPHV PEFTARILEK LKPLMDVDEE IQNHVMEENG 
    IGEEDERTQG IKLLKTILKW LMASAGRSFS TAVTEQLQLL PLFFKIAPVE NDNSYDELKR 
    DAKLCLSLMS QGLLYPHQVP LVLQVLKQTA RSSSWHARYT VLTYLQTMVF YNLFIFLNNE 
    DAVKDIRWLV ISLLEDEQLE VREMAATTLS GLLQCNFLTM DSPMQIHFEQ LCKTKLPKKR 
    KRDPGSVGDT IPSAELVKRH AGVLGLGACV LSSPYDVPTW MPQLLMNLSA HLNDPQPIEM 
    TVKKTLSNFR RTHHDNWQEH KQQFTDDQLL VLTDLLVSPC YYA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.