Cell ID: CL0000118

Cell Name: basket cell

CSI Thresholds:

Select	Context	Threshold
	Overall	4.8239
	Corpus callosum	12.5907
	Corpus callosum + Healthy	12.5896
	Pons + Healthy	9.8947
	Pons	9.8686
	Brodmann (1909) area 19	9.8411
	Brodmann (1909) area 19 + Healthy	9.8154
	Midbrain + Healthy	9.6953
	Midbrain	9.6287
	Head of caudate nucleus	8.8035
	Perirhinal cortex + Healthy	8.6791
	Head of caudate nucleus + Healthy	8.5218
	Perirhinal cortex	8.5185
	Inferior temporal gyrus + Healthy	8.2331
	Inferior temporal gyrus	8.0579
	Inferior parietal cortex	7.1168
	Inferior parietal cortex + Healthy	6.7938
	Superior parietal cortex	6.5813
	Superior parietal cortex + Healthy	6.5713
	Superior temporal sulcus + Healthy	5.9147
	Superior temporal sulcus	5.7197
	Cerebellar vermis + Healthy	4.5170
	Medulla oblongata	4.4160
	Medulla oblongata + Healthy	4.4048
	Cerebellar vermis	4.3905
	Cerebrocerebellum + Healthy	4.0386
	Cerebrocerebellum	3.9494
	Healthy	3.4989
	Primary auditory cortex + Healthy	-1.3177
	Primary auditory cortex	-1.4544
	Nucleus accumbens + Healthy	-14.6227
	Nucleus accumbens	-14.9927
	Prefrontal cortex + Healthy	-18.6843
	Dorsolateral prefrontal cortex	-19.6600
	Dorsolateral prefrontal cortex + Healthy	-19.6778
	Primary visual cortex	-19.6855
	Primary motor cortex + Healthy	-19.7503
	Primary motor cortex	-20.0298
	Entorhinal cortex + Healthy	-20.7356
	Entorhinal cortex	-20.7522
	Hippocampal formation	-23.0464
	Hippocampal formation + Healthy	-26.5794
	Primary visual cortex + Healthy	-27.3139
	Anterior cingulate cortex	-35.8661
	Anterior cingulate cortex + Healthy	-36.2438
	Prefrontal cortex	-37.8032
	Amygdala	-39.0065
	Amygdala + Healthy	-39.1085
	Medial dorsal nucleus of thalamus	-40.5373
	Medial dorsal nucleus of thalamus + Healthy	-40.6796
	Primary somatosensory cortex + Healthy	-41.3653
	Primary somatosensory cortex	-42.0158
	Lateral geniculate body	-60.1683
	Lateral geniculate body + Healthy	-60.1791
	Ventral lateral nucleus of thalamus + Healthy	-61.7834
	Ventral lateral nucleus of thalamus	-61.9897

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(Cell Significance Index is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers.)

Description: Basket cells are inhibitory GABAergic interneurons of the brain. In general, dendrites of basket cells are free branching and contain smooth spines. Axons are highly branched. The branched axonal arborizations give rise to basket-like structures that surround the soma of the target cell. Basket cells form axo-somatic synapses, meaning their synapses target somas of other cells.